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The map label for this gene is yejB [H]

Identifier: 86748895

GI number: 86748895

Start: 2032351

End: 2033460

Strand: Direct

Name: yejB [H]

Synonym: RPB_1772

Alternate gene names: 86748895

Gene position: 2032351-2033460 (Clockwise)

Preceding gene: 86748894

Following gene: 86748896

Centisome position: 38.12

GC content: 62.52

Gene sequence:

>1110_bases
ATGTCCTCCTATATTCTCCGCCGCGTCCTGCTGATGATTCCGACGCTGCTCGGCATCCTGTTCGTGTCCTTCGTCGTGGT
GCAGTTCGCGCCCGGCGGGCCGGTCGAACGGGTGATCGCGCAGCTGTCCGGCGCGGACACCGGCGCCGCCTCGCGCGTCT
CCGGCTCGTCCGGCGGCGATTTCGGCGGGCGGCCGCAGGCGGGCGCCTCGGCCGACGCGGTCAATTCGAAATATCGCGGC
GCGCAGGGGCTCGATCCGGATTTCGTCAAGAGCCTGGAGAAACAGTTCGGCTTCGACAAGCCGGCGCCCGAGCGCTTCGC
CATCATGCTGTGGAATTTCGCGCGGTTCGATTTCGGCAAGAGTTATTTCCGCGACGTCAGCGTGCTGCAACTGATCAAGG
AGAAGCTGCCGGTCTCGATGTCGCTCGGCATCTGGATGACGCTCCTCACCTATCTGATCTCGATTCCGCTCGGCATCCGC
AAGGCGGTGAAGGACGGATCGAAATTCGACACCTGGACCTCGGCGGTGATCATCATCGGCTTCGCGATCCCGGGTTTCCT
GTTCGCGATCCTGCTGATCATCGTGTTCGCCGGCGGCTCGTTCTTCAGCTGGTTTCCGCTGCGCGGCCTGACCTCCGACG
GCTGGAGCGCGTTTCCCTGGTACTGGAAGATCCTGGATTATTTCTGGCACCTGACGCTGCCGCTGATCTCGATGGTGCTC
GGCGCCTTCGCCACCATGACGCTGCTGACCAAGAACTCGTTCCTCGACGAGATCCGCAAGCAATACGTCATGACGGCGCG
CGCCAAGGGTTGCAGCGAAACCCAGGTGCTTTACGGCCACATCTTCCGTAACGCCATGCTGATCGTGATTGCCGGCTTCC
CTGGCGCCTTCATCGGCGCGTTCTTCTCCGGCTCGCTCCTGATCGAGACCATCTTCTCGCTGGACGGGCTCGGCCTGCTC
GGCTTCGAGAGCGTGCTGAACCGCGACTATCCGGTGGTGTTCGGCACGCTGTTCATCTTTTCGCTGGTCGGGCTGGTGGT
GAACCTGATCTCGGATCTGGCCTATATGTGGATCGATCCGCGGATCGACTTCGAGGCGCGGGAAGTCTGA

Upstream 100 bases:

>100_bases
GAACCTGCCGAAATACACCGGCGTCAGCGCCCCGGACCTGTGGTGGGCGAAAAGCAATCCCGCCGCCGAGCGAAGCGACC
CGAAGGGCGAGGGGAAGTAG

Downstream 100 bases:

>100_bases
TGACGTTGATCGCACGCGAGCCGATCGAAAGCACGACGCAGGCCCCGCTCGGCGAGGCGGTGCCGCCGACCCGCCATCGT
CTCTCGATCTCGCCGCTGAA

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 368

Protein sequence:

>369_residues
MSSYILRRVLLMIPTLLGILFVSFVVVQFAPGGPVERVIAQLSGADTGAASRVSGSSGGDFGGRPQAGASADAVNSKYRG
AQGLDPDFVKSLEKQFGFDKPAPERFAIMLWNFARFDFGKSYFRDVSVLQLIKEKLPVSMSLGIWMTLLTYLISIPLGIR
KAVKDGSKFDTWTSAVIIIGFAIPGFLFAILLIIVFAGGSFFSWFPLRGLTSDGWSAFPWYWKILDYFWHLTLPLISMVL
GAFATMTLLTKNSFLDEIRKQYVMTARAKGCSETQVLYGHIFRNAMLIVIAGFPGAFIGAFFSGSLLIETIFSLDGLGLL
GFESVLNRDYPVVFGTLFIFSLVGLVVNLISDLAYMWIDPRIDFEAREV

Sequences:

>Translated_369_residues
MSSYILRRVLLMIPTLLGILFVSFVVVQFAPGGPVERVIAQLSGADTGAASRVSGSSGGDFGGRPQAGASADAVNSKYRG
AQGLDPDFVKSLEKQFGFDKPAPERFAIMLWNFARFDFGKSYFRDVSVLQLIKEKLPVSMSLGIWMTLLTYLISIPLGIR
KAVKDGSKFDTWTSAVIIIGFAIPGFLFAILLIIVFAGGSFFSWFPLRGLTSDGWSAFPWYWKILDYFWHLTLPLISMVL
GAFATMTLLTKNSFLDEIRKQYVMTARAKGCSETQVLYGHIFRNAMLIVIAGFPGAFIGAFFSGSLLIETIFSLDGLGLL
GFESVLNRDYPVVFGTLFIFSLVGLVVNLISDLAYMWIDPRIDFEAREV
>Mature_368_residues
SSYILRRVLLMIPTLLGILFVSFVVVQFAPGGPVERVIAQLSGADTGAASRVSGSSGGDFGGRPQAGASADAVNSKYRGA
QGLDPDFVKSLEKQFGFDKPAPERFAIMLWNFARFDFGKSYFRDVSVLQLIKEKLPVSMSLGIWMTLLTYLISIPLGIRK
AVKDGSKFDTWTSAVIIIGFAIPGFLFAILLIIVFAGGSFFSWFPLRGLTSDGWSAFPWYWKILDYFWHLTLPLISMVLG
AFATMTLLTKNSFLDEIRKQYVMTARAKGCSETQVLYGHIFRNAMLIVIAGFPGAFIGAFFSGSLLIETIFSLDGLGLLG
FESVLNRDYPVVFGTLFIFSLVGLVVNLISDLAYMWIDPRIDFEAREV

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4174

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788504, Length=367, Percent_Identity=58.0381471389646, Blast_Score=452, Evalue=1e-128,
Organism=Escherichia coli, GI1789965, Length=381, Percent_Identity=27.8215223097113, Blast_Score=142, Evalue=3e-35,
Organism=Escherichia coli, GI1787497, Length=365, Percent_Identity=27.1232876712329, Blast_Score=142, Evalue=4e-35,
Organism=Escherichia coli, GI1787053, Length=365, Percent_Identity=28.4931506849315, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI1789888, Length=362, Percent_Identity=27.6243093922652, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1787550, Length=253, Percent_Identity=24.901185770751, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1787761, Length=292, Percent_Identity=26.7123287671233, Blast_Score=80, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 40737; Mature: 40606

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSYILRRVLLMIPTLLGILFVSFVVVQFAPGGPVERVIAQLSGADTGAASRVSGSSGGD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
FGGRPQAGASADAVNSKYRGAQGLDPDFVKSLEKQFGFDKPAPERFAIMLWNFARFDFGK
CCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
SYFRDVSVLQLIKEKLPVSMSLGIWMTLLTYLISIPLGIRKAVKDGSKFDTWTSAVIIIG
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHH
FAIPGFLFAILLIIVFAGGSFFSWFPLRGLTSDGWSAFPWYWKILDYFWHLTLPLISMVL
HHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GAFATMTLLTKNSFLDEIRKQYVMTARAKGCSETQVLYGHIFRNAMLIVIAGFPGAFIGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEECCCHHHHHH
FFSGSLLIETIFSLDGLGLLGFESVLNRDYPVVFGTLFIFSLVGLVVNLISDLAYMWIDP
HHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RIDFEAREV
CCCCCCCCC
>Mature Secondary Structure 
SSYILRRVLLMIPTLLGILFVSFVVVQFAPGGPVERVIAQLSGADTGAASRVSGSSGGD
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
FGGRPQAGASADAVNSKYRGAQGLDPDFVKSLEKQFGFDKPAPERFAIMLWNFARFDFGK
CCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
SYFRDVSVLQLIKEKLPVSMSLGIWMTLLTYLISIPLGIRKAVKDGSKFDTWTSAVIIIG
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHH
FAIPGFLFAILLIIVFAGGSFFSWFPLRGLTSDGWSAFPWYWKILDYFWHLTLPLISMVL
HHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GAFATMTLLTKNSFLDEIRKQYVMTARAKGCSETQVLYGHIFRNAMLIVIAGFPGAFIGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEECCCHHHHHH
FFSGSLLIETIFSLDGLGLLGFESVLNRDYPVVFGTLFIFSLVGLVVNLISDLAYMWIDP
HHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RIDFEAREV
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]