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The map label for this gene is ybfB [H]

Identifier: 86748799

GI number: 86748799

Start: 1907753

End: 1908988

Strand: Direct

Name: ybfB [H]

Synonym: RPB_1676

Alternate gene names: 86748799

Gene position: 1907753-1908988 (Clockwise)

Preceding gene: 86748796

Following gene: 86748800

Centisome position: 35.78

GC content: 67.23

Gene sequence:

>1236_bases
ATGAAGGCAGCCCAGCTCAGCTCGTTTCAGCGCTGGTCGATTCTGATCGGCGCGTCCGTGCTGCTCAGCCTCGCAATGGG
CATGCGGCAGAGCTTCGGGCTGTTTCAGCCGTCCGTGATTCGCGATATCGGCATCACCAGCGCCGACTTCTCGCTGGCGA
CGGCCCTGCAGAACATCATCTGGGGCGTGACGCAGCCGATGGTCGGGCTGCTCGCCGACCGCTACGGCACCCGCTGGGTG
ATGCTCGGCGGCGTCGTGGTCTATGCCGCCGGTCTGGTGCTGATGATGGTTGCCGAATCGGCGCTGGTGTTCACGCTCGG
CGCCGGCGTCTGCGTCGGCATCGCGCTGTCCTGCACCGCCTCCAGCATGACCATGACCGTCACGTCGCGCACGGTGTCGG
CGGCCAAGCGCAGCGTCGCGATGGGCGCGGTGTCGGCGGCCGGATCGCTCGGCCTGGTGATCGCCTCGCCGCTGGCGCAG
ACGCTGATCACCACCGCGGGCTGGCAGATGGCGCTGATCGGCTTTCTCGGCCTCGTCGCGGTGATGCTGCCGTCGGCGCT
GTTCGCCGGCCGCGCCGACAAGATCGAGATCGAGAAGGCCGACGATCTGCAGCAGTCGGCCGGCGAAGTGGTGCAGAGCG
CCCTCGGCCATTCCGGCTTCATGGTGATGGCGATCGCGTTCTTCGTCTGCGGGCTGCAGCTCGTCTTCATCACCACGCAT
CTGCCGAACTATCTGGCGATCTGCGGCCTCGATCCGTCGCTCGGCGCCAGCGCGCTGGCGGTGATCGGATTGTTCAACGT
GATCGGCTCCTACGCCTTCGGCTGGCTCGGCGGGCGCTATCCCAAACAATATCTGCTCGGCGGCATCTACATCGTGCGCT
CGCTGGCGATCGCGGCGTATTTCTACTTCCCGGCGTCGGCGACCACCACGCTGGTGTTCGCCGCGGTGATGGGCACGCTG
TGGCTCGGGGTGATTCCGCTGGTCAACGGCCTGGTCGCGCAACTGTTCGGGCTGCGCTACATGGCGACGCTGACCGGCAT
CGCCTTCCTCAGCCATCAGGTCGGCTCGTTCATCGGCGCCTGGGGCGGCGGCGTGATCTACGATCATCTCGGCAATTATG
ATCGCGCCTGGCAGGCGGCGGTTCTGATCGGGCTGATCGCAGGCACCGCGCAGATGCTGATGAACGTTCGCCCGCCGCAG
CGGCGGGAGGGCCTCGCGGTGCCGGCCACGGCGTGA

Upstream 100 bases:

>100_bases
CGTTCCGTGCAGAACCCCGATACCGGCCGCAAGGATGGTCAAACGCCGCATTTCAGGGCATGAGTATTCTCAAAATCGCG
ATGCGAGAGGAAACGATCCC

Downstream 100 bases:

>100_bases
GCCGGCAGCCGCTAAGCCGTTCAGGCGTCGACGGTATCGGCACACGGGGCGCGGCCGTGACACACTGTTGCAATTCAGAA
TAGATATTGGGTCCGTAGTC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MKAAQLSSFQRWSILIGASVLLSLAMGMRQSFGLFQPSVIRDIGITSADFSLATALQNIIWGVTQPMVGLLADRYGTRWV
MLGGVVVYAAGLVLMMVAESALVFTLGAGVCVGIALSCTASSMTMTVTSRTVSAAKRSVAMGAVSAAGSLGLVIASPLAQ
TLITTAGWQMALIGFLGLVAVMLPSALFAGRADKIEIEKADDLQQSAGEVVQSALGHSGFMVMAIAFFVCGLQLVFITTH
LPNYLAICGLDPSLGASALAVIGLFNVIGSYAFGWLGGRYPKQYLLGGIYIVRSLAIAAYFYFPASATTTLVFAAVMGTL
WLGVIPLVNGLVAQLFGLRYMATLTGIAFLSHQVGSFIGAWGGGVIYDHLGNYDRAWQAAVLIGLIAGTAQMLMNVRPPQ
RREGLAVPATA

Sequences:

>Translated_411_residues
MKAAQLSSFQRWSILIGASVLLSLAMGMRQSFGLFQPSVIRDIGITSADFSLATALQNIIWGVTQPMVGLLADRYGTRWV
MLGGVVVYAAGLVLMMVAESALVFTLGAGVCVGIALSCTASSMTMTVTSRTVSAAKRSVAMGAVSAAGSLGLVIASPLAQ
TLITTAGWQMALIGFLGLVAVMLPSALFAGRADKIEIEKADDLQQSAGEVVQSALGHSGFMVMAIAFFVCGLQLVFITTH
LPNYLAICGLDPSLGASALAVIGLFNVIGSYAFGWLGGRYPKQYLLGGIYIVRSLAIAAYFYFPASATTTLVFAAVMGTL
WLGVIPLVNGLVAQLFGLRYMATLTGIAFLSHQVGSFIGAWGGGVIYDHLGNYDRAWQAAVLIGLIAGTAQMLMNVRPPQ
RREGLAVPATA
>Mature_411_residues
MKAAQLSSFQRWSILIGASVLLSLAMGMRQSFGLFQPSVIRDIGITSADFSLATALQNIIWGVTQPMVGLLADRYGTRWV
MLGGVVVYAAGLVLMMVAESALVFTLGAGVCVGIALSCTASSMTMTVTSRTVSAAKRSVAMGAVSAAGSLGLVIASPLAQ
TLITTAGWQMALIGFLGLVAVMLPSALFAGRADKIEIEKADDLQQSAGEVVQSALGHSGFMVMAIAFFVCGLQLVFITTH
LPNYLAICGLDPSLGASALAVIGLFNVIGSYAFGWLGGRYPKQYLLGGIYIVRSLAIAAYFYFPASATTTLVFAAVMGTL
WLGVIPLVNGLVAQLFGLRYMATLTGIAFLSHQVGSFIGAWGGGVIYDHLGNYDRAWQAAVLIGLIAGTAQMLMNVRPPQ
RREGLAVPATA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42968; Mature: 42968

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCC
>Mature Secondary Structure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CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]