| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is 86748764
Identifier: 86748764
GI number: 86748764
Start: 1871011
End: 1871940
Strand: Direct
Name: 86748764
Synonym: RPB_1641
Alternate gene names: NA
Gene position: 1871011-1871940 (Clockwise)
Preceding gene: 86748763
Following gene: 86748765
Centisome position: 35.09
GC content: 63.66
Gene sequence:
>930_bases ATGACGTCGTCATCTAATTCGTCGAGAATAATCGACAGATTGGATGGGGTCATGCTGGCGTCGAGCAACACAACACGCGA AACGGACGCCGTCGAAGGCTTCGGATCTCTGGCGCAGCCGACCCGGCTCGCCGCGGTCCGGCTCCTGTTGTCGGCGTATC CAGCATCGTTGTCGGCTGGAGAGATCGCCCGGCGATGCGACGTGCCGCACAACACGATGTCGACGCATCTCGGCATCCTG CAGCGCGCCGGGTTGATCGGCGTCGAAAAGACCGGCCGCTCGATGAACTACCGCGCCGACCCCGCCGGCTTCCGCAGCCT GATCGCGTTCCTGGCCCGCGACTGCTGCAGCGGCCGCCCCGACATCTGCGCCGACATCTTCGATGTTACCAAGCCCGCAC CTCCCCTGCCGATGGAGACGTTCATGACTCCCGCCTTCAACGTCCTGTTCCTTTGCACGCAGAATTCCGCGCGCTCGATC ATCGCCGAAGCCCTGCTGGAGAAAGTCGGGCAAGGCCGCTTCCGCGGTTACTCGGCAGGCTCCGCGCCGGCGCAGCAACC GCTGCCGCAAGTGATCGAGCGCCTGCAGGCGCTGGGTCACGATGTGACGCGGCTCCATTCGAAATCCTGGGACGAATTCA AGCGGCCGGATGCGCCGCGGATGGATTTCATCATCGCGCTTTGCGATACGCCGAGCGGTCAGATCTGCCCGGATTTCGGT GGACAATATGTCACCGCCGCGTGGCCGCTGCCCGATCCGGCGCAGTTTTCGGGCTCGGAGGTCGAACGCACAACGCTGCT CAACGAGCTTTACGCGATGATCCGCAGGCGTCTCGAAATCTTCACCAGCCTGCCGTTCGAGTCGCTCGACCGAATGGCGG TGAAGGCCCGCCTCGATGAAATCGGCGACACCAACCTCGTCAAGCCCTGA
Upstream 100 bases:
>100_bases CCCGGCGCTCCTGTAAGGCATTATGTCGATAATCATGGACGAATAAACGGGCATTTATTCCATATGACGGCCTACTGAGG CCAATATTCATTTGATTGTC
Downstream 100 bases:
>100_bases AGGAACTCCCATGAAGGTCGGCATCAACGGCATGGGCCGGATCGGACGATTGGCGCTGCGCGCGGCACTCGGCGGAATTC GGCGACCTGACAACGATCCG
Product: protein tyrosine phosphatase
Products: NA
Alternate protein names: Arsenate Reductase; Protein-Tyrosine Phosphatase Low Molecular Weight; ArsR Family Transcriptional Regulator; Low Molecular Weight Phosphotyrosine Protein Phosphatase; Transcriptional Regulator ArsR Family; Protein-Tyrosine-Phosphatase; Regulatory Protein ArsR; Transcriptional Regulator; Transcriptional Regulator/Arsenate Reductase; Transcriptional Regulator ArsR Family Protein; Protein ArsC; Arsenate Reductase ArsC; Phosphatase; Arsenic Resistance Transcriptional Regulator; ArsR-Family Transcriptional Regulator; Protein-Tyrosine-Phosphatase Protein; Transcriptional Regulatory Protein; Arsenate Reductase Subunit ArsC; Transcription Regulator Protein; Arsenate Reductase / Phosphotyrosine Protein Phosphatase; ArsR Family Transcriptional Regulator Tyrosine Phosphatase; Arsenate Reductase Gene ARSC; Protein-Tyrosine Phosphatase
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MTSSSNSSRIIDRLDGVMLASSNTTRETDAVEGFGSLAQPTRLAAVRLLLSAYPASLSAGEIARRCDVPHNTMSTHLGIL QRAGLIGVEKTGRSMNYRADPAGFRSLIAFLARDCCSGRPDICADIFDVTKPAPPLPMETFMTPAFNVLFLCTQNSARSI IAEALLEKVGQGRFRGYSAGSAPAQQPLPQVIERLQALGHDVTRLHSKSWDEFKRPDAPRMDFIIALCDTPSGQICPDFG GQYVTAAWPLPDPAQFSGSEVERTTLLNELYAMIRRRLEIFTSLPFESLDRMAVKARLDEIGDTNLVKP
Sequences:
>Translated_309_residues MTSSSNSSRIIDRLDGVMLASSNTTRETDAVEGFGSLAQPTRLAAVRLLLSAYPASLSAGEIARRCDVPHNTMSTHLGIL QRAGLIGVEKTGRSMNYRADPAGFRSLIAFLARDCCSGRPDICADIFDVTKPAPPLPMETFMTPAFNVLFLCTQNSARSI IAEALLEKVGQGRFRGYSAGSAPAQQPLPQVIERLQALGHDVTRLHSKSWDEFKRPDAPRMDFIIALCDTPSGQICPDFG GQYVTAAWPLPDPAQFSGSEVERTTLLNELYAMIRRRLEIFTSLPFESLDRMAVKARLDEIGDTNLVKP >Mature_308_residues TSSSNSSRIIDRLDGVMLASSNTTRETDAVEGFGSLAQPTRLAAVRLLLSAYPASLSAGEIARRCDVPHNTMSTHLGILQ RAGLIGVEKTGRSMNYRADPAGFRSLIAFLARDCCSGRPDICADIFDVTKPAPPLPMETFMTPAFNVLFLCTQNSARSII AEALLEKVGQGRFRGYSAGSAPAQQPLPQVIERLQALGHDVTRLHSKSWDEFKRPDAPRMDFIIALCDTPSGQICPDFGG QYVTAAWPLPDPAQFSGSEVERTTLLNELYAMIRRRLEIFTSLPFESLDRMAVKARLDEIGDTNLVKP
Specific function: Unknown
COG id: COG0394
COG function: function code T; Protein-tyrosine-phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33792; Mature: 33661
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSSNSSRIIDRLDGVMLASSNTTRETDAVEGFGSLAQPTRLAAVRLLLSAYPASLSAG CCCCCCHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHH EIARRCDVPHNTMSTHLGILQRAGLIGVEKTGRSMNYRADPAGFRSLIAFLARDCCSGRP HHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC DICADIFDVTKPAPPLPMETFMTPAFNVLFLCTQNSARSIIAEALLEKVGQGRFRGYSAG HHHHHHHHHCCCCCCCCHHHHHCCHHHEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCC SAPAQQPLPQVIERLQALGHDVTRLHSKSWDEFKRPDAPRMDFIIALCDTPSGQICPDFG CCCCCCHHHHHHHHHHHHCHHHHHHHHCCHHHHCCCCCCCCEEEEEEECCCCCCCCCCCC GQYVTAAWPLPDPAQFSGSEVERTTLLNELYAMIRRRLEIFTSLPFESLDRMAVKARLDE CCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH IGDTNLVKP CCCCCCCCC >Mature Secondary Structure TSSSNSSRIIDRLDGVMLASSNTTRETDAVEGFGSLAQPTRLAAVRLLLSAYPASLSAG CCCCCHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHH EIARRCDVPHNTMSTHLGILQRAGLIGVEKTGRSMNYRADPAGFRSLIAFLARDCCSGRP HHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC DICADIFDVTKPAPPLPMETFMTPAFNVLFLCTQNSARSIIAEALLEKVGQGRFRGYSAG HHHHHHHHHCCCCCCCCHHHHHCCHHHEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCC SAPAQQPLPQVIERLQALGHDVTRLHSKSWDEFKRPDAPRMDFIIALCDTPSGQICPDFG CCCCCCHHHHHHHHHHHHCHHHHHHHHCCHHHHCCCCCCCCEEEEEEECCCCCCCCCCCC GQYVTAAWPLPDPAQFSGSEVERTTLLNELYAMIRRRLEIFTSLPFESLDRMAVKARLDE CCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH IGDTNLVKP CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA