| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is cutL [H]
Identifier: 86748737
GI number: 86748737
Start: 1818988
End: 1821291
Strand: Direct
Name: cutL [H]
Synonym: RPB_1613
Alternate gene names: 86748737
Gene position: 1818988-1821291 (Clockwise)
Preceding gene: 86748736
Following gene: 86748738
Centisome position: 34.12
GC content: 66.19
Gene sequence:
>2304_bases ATGGCTCCTACCAAATTCGGCGTCGGCCAAAGCGTGATGCGCAAGGAGGATGATCCCCTGATCCGCGGCAAGGGCCGCTA TACCGACGACTACGCGCCGCAATCCTCGGCGCACGCGCTGGTGCTGCGATCACCGCATGCGCATGCGAAATTCAGGCTCG ACGCGACGGCGGCGCGCGGCCTGCACGGCGTGCTCGCGATCCTCACCGCCGAAGACGTCAGCGATCTCGGCGGGCTGCCG TGCCTGTTCAACCTACCCGACAATCCGTTCAAGGGGCCGGACTACGCGATCCTCGCCGGCGGCGAGGTGCGTCATGTCGG CGACGCAGTGGCCTTCGTGGTCGCGGATACGGTGGCGCATGCGCGCGACGCGCTGGAGGCGATCGCGGTCGAATGGACGC CGCTGCCGGCGGCGATCGGCGCGGCCAATGCGATCAAGCCCGGCGCGCCGCAGGTGTGGCCGGACCACGCCGGCAATCTG CTGTTCGACACCGCGATCGGCGACAAGGCCGCAACAGAGGCCGCGTTCGCGAAGGCTCATGCCGTCGCCGAGATCGCCAT CGTCAATCCGCGGATCATCACCAACTACATGGAGACCCGCGCCGCGGTCTGCGAATATGACGCCAAGCGCGATCATTTCA CGCTGACGATCGGCAGCCAGGGCAGCCACCGGCTGCGTGATATCCTGTGCCAGAACGTGCTGAAAATTCCGGTCGAGAAG ATGCGGGTGATCTGCCCCGATGTCGGCGGCGGCTTCGGCACCAAGCTGTTTCCGTATCGCGAATACGCGCTGCTGGCGGT CGCGGCTAAGAAGCTCGGCAAGACCATCCGCTGGGCGGCCGACCGCTCCGATCATTTCGTCGGCGACTCGCAGGGCCGCG ACAACATCACCACGGCGCGGATGGCGCTCGCGGCGGATGGCAAGTTTCTCGGCATGGACGTCGACCTGATCGGCGATCTC GGCGCCTATCTGTCGACCTTCGGGCCTTACATCCCGTATGGCGGCGCCGGAATGTTGCCGGGGCTCTACGACATTCAGGC GTTTTACTGCCGCATCCGGACGGTGTTCACCCACACTGTTCCAGTCGATGCCTATCGCGGCGCCGGTCGGCCCGAAGCGG CCTATGTCATCGAACGTCTGGTCGATGCCTGCGCGCGCAAGCTCGGGATGTCGCCGGATGCGATCCGGCGCAAGAATTTC ATCGCGCCGCGCGCGATGCCCTACAAGACTGCGACCGGCAAGGTCTACGACTCCGGTGATTTCGCCGCGCATCTGAAACG CGCGATGGACATCGGCGAGTGGAAGGAATTTCCGAAGCGCGCCAAGGCAGCGACGAAACTCGGGCTGGTGCGCGGCATCG GCCTGGCCTCCTATGTCGAAGTCTGCGGCACGATGGGCGAGGAGACCGCCAAGGTCGTGCTCGATCCCGACGGCGACATC ACCGTTCTGATCGGCACCCAGTCGAGCGGGCAGGGCCATCAGACCGCCTATGCGCAGATCGTCGCCGAACAGTTCGGCGT GCCGCCGGAGCGCGTCCGCGTGGTTCAGGGCGACACCGACAGGATTGCGACCGGGCTCGGCACCGGCGGCTCGGCATCGA TCCCCTCGGGCGGCGTCAGCGTTCAACGCGCGACGCACCAAATCGGCGAGCAGATTCGCGAGTTGGCCGCGGACGCGCTG GAAGCCGGCGCTGCGGATCTCGAAATCAGCGACGGCATCGTCCGCATCGCCGGCACCGACCGCTCGATCTCGTTCGCCGA TCTCGCCAAGCGCCCCGGCCTCGATCCGGCCAAGCTGAATGCCAGCGCGACGTTCTCCAGCGCCGACGGCACGTTCCCAA ACGGCACGCATTTGGTCGAAGTCGAGATCGATCCGGCGACCGGCAAAATCCGGATCGTCAACTACGTCATCGTCGACGAT TTCGGCGTGACGCTGAACCCGCTGCTGCTCGCCGGCCAGGTTCATGGCGGCACCATCCAGGGCATCGGGCAGGCGCTGAT GGAGCGGGCGGTGTACGATCAGGACGGCCAGCTCGTCACCGGCACCTTCATGGATTACGCGATGCCGCGCGCGGAGGATG CCGCGCCGATCATCTTCGAGACTCACAACGTGCCGTGCACCACCAACCCGATGGGTGTGAAGGGGGCCGGCGAGGCCGGC GCGATCGGCTCGTGCCCGGCCGTGGTCAATGCGATCATCGATGCCCTGTGGCGCGAGTACAAGATCGACCACATCGACAT GCCGGCCACGCCGGAGCGGGTTTGGATGGCAATCCGCGAGCACCATCGGCAGCACAGTCTCTAG
Upstream 100 bases:
>100_bases TGTACGCTTTTGGCTTGGTTAGTGCCGCCACTGAGCAATGGCGTTTGCACCGATCCGCGATCCGCTGCAAGATGCACCAC CGCATCCAATGAGGTGATCG
Downstream 100 bases:
>100_bases AGCCGCAGTTGGATCGGACCAGTCGAGCCGGTATTCACTTCGATCGACGACGCGTGCTTGTTGACGATTGCGTGATCGGA GAAGCGCCATGGTACGATCG
Product: carbon-monoxide dehydrogenase
Products: NA
Alternate protein names: CO dehydrogenase subunit L; CO-DH L [H]
Number of amino acids: Translated: 767; Mature: 766
Protein sequence:
>767_residues MAPTKFGVGQSVMRKEDDPLIRGKGRYTDDYAPQSSAHALVLRSPHAHAKFRLDATAARGLHGVLAILTAEDVSDLGGLP CLFNLPDNPFKGPDYAILAGGEVRHVGDAVAFVVADTVAHARDALEAIAVEWTPLPAAIGAANAIKPGAPQVWPDHAGNL LFDTAIGDKAATEAAFAKAHAVAEIAIVNPRIITNYMETRAAVCEYDAKRDHFTLTIGSQGSHRLRDILCQNVLKIPVEK MRVICPDVGGGFGTKLFPYREYALLAVAAKKLGKTIRWAADRSDHFVGDSQGRDNITTARMALAADGKFLGMDVDLIGDL GAYLSTFGPYIPYGGAGMLPGLYDIQAFYCRIRTVFTHTVPVDAYRGAGRPEAAYVIERLVDACARKLGMSPDAIRRKNF IAPRAMPYKTATGKVYDSGDFAAHLKRAMDIGEWKEFPKRAKAATKLGLVRGIGLASYVEVCGTMGEETAKVVLDPDGDI TVLIGTQSSGQGHQTAYAQIVAEQFGVPPERVRVVQGDTDRIATGLGTGGSASIPSGGVSVQRATHQIGEQIRELAADAL EAGAADLEISDGIVRIAGTDRSISFADLAKRPGLDPAKLNASATFSSADGTFPNGTHLVEVEIDPATGKIRIVNYVIVDD FGVTLNPLLLAGQVHGGTIQGIGQALMERAVYDQDGQLVTGTFMDYAMPRAEDAAPIIFETHNVPCTTNPMGVKGAGEAG AIGSCPAVVNAIIDALWREYKIDHIDMPATPERVWMAIREHHRQHSL
Sequences:
>Translated_767_residues MAPTKFGVGQSVMRKEDDPLIRGKGRYTDDYAPQSSAHALVLRSPHAHAKFRLDATAARGLHGVLAILTAEDVSDLGGLP CLFNLPDNPFKGPDYAILAGGEVRHVGDAVAFVVADTVAHARDALEAIAVEWTPLPAAIGAANAIKPGAPQVWPDHAGNL LFDTAIGDKAATEAAFAKAHAVAEIAIVNPRIITNYMETRAAVCEYDAKRDHFTLTIGSQGSHRLRDILCQNVLKIPVEK MRVICPDVGGGFGTKLFPYREYALLAVAAKKLGKTIRWAADRSDHFVGDSQGRDNITTARMALAADGKFLGMDVDLIGDL GAYLSTFGPYIPYGGAGMLPGLYDIQAFYCRIRTVFTHTVPVDAYRGAGRPEAAYVIERLVDACARKLGMSPDAIRRKNF IAPRAMPYKTATGKVYDSGDFAAHLKRAMDIGEWKEFPKRAKAATKLGLVRGIGLASYVEVCGTMGEETAKVVLDPDGDI TVLIGTQSSGQGHQTAYAQIVAEQFGVPPERVRVVQGDTDRIATGLGTGGSASIPSGGVSVQRATHQIGEQIRELAADAL EAGAADLEISDGIVRIAGTDRSISFADLAKRPGLDPAKLNASATFSSADGTFPNGTHLVEVEIDPATGKIRIVNYVIVDD FGVTLNPLLLAGQVHGGTIQGIGQALMERAVYDQDGQLVTGTFMDYAMPRAEDAAPIIFETHNVPCTTNPMGVKGAGEAG AIGSCPAVVNAIIDALWREYKIDHIDMPATPERVWMAIREHHRQHSL >Mature_766_residues APTKFGVGQSVMRKEDDPLIRGKGRYTDDYAPQSSAHALVLRSPHAHAKFRLDATAARGLHGVLAILTAEDVSDLGGLPC LFNLPDNPFKGPDYAILAGGEVRHVGDAVAFVVADTVAHARDALEAIAVEWTPLPAAIGAANAIKPGAPQVWPDHAGNLL FDTAIGDKAATEAAFAKAHAVAEIAIVNPRIITNYMETRAAVCEYDAKRDHFTLTIGSQGSHRLRDILCQNVLKIPVEKM RVICPDVGGGFGTKLFPYREYALLAVAAKKLGKTIRWAADRSDHFVGDSQGRDNITTARMALAADGKFLGMDVDLIGDLG AYLSTFGPYIPYGGAGMLPGLYDIQAFYCRIRTVFTHTVPVDAYRGAGRPEAAYVIERLVDACARKLGMSPDAIRRKNFI APRAMPYKTATGKVYDSGDFAAHLKRAMDIGEWKEFPKRAKAATKLGLVRGIGLASYVEVCGTMGEETAKVVLDPDGDIT VLIGTQSSGQGHQTAYAQIVAEQFGVPPERVRVVQGDTDRIATGLGTGGSASIPSGGVSVQRATHQIGEQIRELAADALE AGAADLEISDGIVRIAGTDRSISFADLAKRPGLDPAKLNASATFSSADGTFPNGTHLVEVEIDPATGKIRIVNYVIVDDF GVTLNPLLLAGQVHGGTIQGIGQALMERAVYDQDGQLVTGTFMDYAMPRAEDAAPIIFETHNVPCTTNPMGVKGAGEAGA IGSCPAVVNAIIDALWREYKIDHIDMPATPERVWMAIREHHRQHSL
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI71773480, Length=778, Percent_Identity=23.7789203084833, Blast_Score=144, Evalue=4e-34, Organism=Homo sapiens, GI91823271, Length=778, Percent_Identity=22.879177377892, Blast_Score=126, Evalue=1e-28, Organism=Escherichia coli, GI1789230, Length=762, Percent_Identity=30.7086614173228, Blast_Score=239, Evalue=4e-64, Organism=Escherichia coli, GI1789246, Length=810, Percent_Identity=24.8148148148148, Blast_Score=197, Evalue=2e-51, Organism=Escherichia coli, GI1786478, Length=745, Percent_Identity=26.4429530201342, Blast_Score=114, Evalue=3e-26, Organism=Caenorhabditis elegans, GI17539860, Length=775, Percent_Identity=25.0322580645161, Blast_Score=150, Evalue=3e-36, Organism=Caenorhabditis elegans, GI17540638, Length=789, Percent_Identity=24.5880861850444, Blast_Score=148, Evalue=1e-35, Organism=Caenorhabditis elegans, GI32566215, Length=564, Percent_Identity=25.354609929078, Blast_Score=129, Evalue=5e-30, Organism=Drosophila melanogaster, GI17737937, Length=726, Percent_Identity=24.6556473829201, Blast_Score=111, Evalue=2e-24, Organism=Drosophila melanogaster, GI24647193, Length=756, Percent_Identity=22.8835978835979, Blast_Score=100, Evalue=6e-21, Organism=Drosophila melanogaster, GI24647199, Length=510, Percent_Identity=23.921568627451, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI24647197, Length=323, Percent_Identity=29.1021671826625, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI24647195, Length=294, Percent_Identity=30.2721088435374, Blast_Score=82, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012780 [H]
Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 81770; Mature: 81639
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPTKFGVGQSVMRKEDDPLIRGKGRYTDDYAPQSSAHALVLRSPHAHAKFRLDATAARG CCCCCCCCCHHHHHCCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEHHHHCC LHGVLAILTAEDVSDLGGLPCLFNLPDNPFKGPDYAILAGGEVRHVGDAVAFVVADTVAH HHHHEEEEEHHHHHHCCCCCEEECCCCCCCCCCCEEEEECCCEEHHHHHHHHHHHHHHHH ARDALEAIAVEWTPLPAAIGAANAIKPGAPQVWPDHAGNLLFDTAIGDKAATEAAFAKAH HHHHHHHHEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHH AVAEIAIVNPRIITNYMETRAAVCEYDAKRDHFTLTIGSQGSHRLRDILCQNVLKIPVEK HHEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCHHH MRVICPDVGGGFGTKLFPYREYALLAVAAKKLGKTIRWAADRSDHFVGDSQGRDNITTAR HHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHH MALAADGKFLGMDVDLIGDLGAYLSTFGPYIPYGGAGMLPGLYDIQAFYCRIRTVFTHTV EEEECCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEC PVDAYRGAGRPEAAYVIERLVDACARKLGMSPDAIRRKNFIAPRAMPYKTATGKVYDSGD CCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCEECCCH FAAHLKRAMDIGEWKEFPKRAKAATKLGLVRGIGLASYVEVCGTMGEETAKVVLDPDGDI HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEECCCCCE TVLIGTQSSGQGHQTAYAQIVAEQFGVPPERVRVVQGDTDRIATGLGTGGSASIPSGGVS EEEEECCCCCCCCHHHHHHHHHHHHCCCHHHEEEEECCCHHHHHCCCCCCCCCCCCCCCH VQRATHQIGEQIRELAADALEAGAADLEISDGIVRIAGTDRSISFADLAKRPGLDPAKLN HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCCCHHHHHHCCCCCHHHCC ASATFSSADGTFPNGTHLVEVEIDPATGKIRIVNYVIVDDFGVTLNPLLLAGQVHGGTIQ CCEEECCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEECCCCCCCCEEEEEECCCCHHH GIGQALMERAVYDQDGQLVTGTFMDYAMPRAEDAAPIIFETHNVPCTTNPMGVKGAGEAG HHHHHHHHHHHCCCCCCEEEEEHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC AIGSCPAVVNAIIDALWREYKIDHIDMPATPERVWMAIREHHRQHSL CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure APTKFGVGQSVMRKEDDPLIRGKGRYTDDYAPQSSAHALVLRSPHAHAKFRLDATAARG CCCCCCCCHHHHHCCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEHHHHCC LHGVLAILTAEDVSDLGGLPCLFNLPDNPFKGPDYAILAGGEVRHVGDAVAFVVADTVAH HHHHEEEEEHHHHHHCCCCCEEECCCCCCCCCCCEEEEECCCEEHHHHHHHHHHHHHHHH ARDALEAIAVEWTPLPAAIGAANAIKPGAPQVWPDHAGNLLFDTAIGDKAATEAAFAKAH HHHHHHHHEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHH AVAEIAIVNPRIITNYMETRAAVCEYDAKRDHFTLTIGSQGSHRLRDILCQNVLKIPVEK HHEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCHHH MRVICPDVGGGFGTKLFPYREYALLAVAAKKLGKTIRWAADRSDHFVGDSQGRDNITTAR HHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHH MALAADGKFLGMDVDLIGDLGAYLSTFGPYIPYGGAGMLPGLYDIQAFYCRIRTVFTHTV EEEECCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEC PVDAYRGAGRPEAAYVIERLVDACARKLGMSPDAIRRKNFIAPRAMPYKTATGKVYDSGD CCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCEECCCH FAAHLKRAMDIGEWKEFPKRAKAATKLGLVRGIGLASYVEVCGTMGEETAKVVLDPDGDI HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEECCCCCE TVLIGTQSSGQGHQTAYAQIVAEQFGVPPERVRVVQGDTDRIATGLGTGGSASIPSGGVS EEEEECCCCCCCCHHHHHHHHHHHHCCCHHHEEEEECCCHHHHHCCCCCCCCCCCCCCCH VQRATHQIGEQIRELAADALEAGAADLEISDGIVRIAGTDRSISFADLAKRPGLDPAKLN HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCCCHHHHHHCCCCCHHHCC ASATFSSADGTFPNGTHLVEVEIDPATGKIRIVNYVIVDDFGVTLNPLLLAGQVHGGTIQ CCEEECCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEECCCCCCCCEEEEEECCCCHHH GIGQALMERAVYDQDGQLVTGTFMDYAMPRAEDAAPIIFETHNVPCTTNPMGVKGAGEAG HHHHHHHHHHHCCCCCCEEEEEHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC AIGSCPAVVNAIIDALWREYKIDHIDMPATPERVWMAIREHHRQHSL CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]