| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is braE [H]
Identifier: 86748682
GI number: 86748682
Start: 1755390
End: 1756463
Strand: Reverse
Name: braE [H]
Synonym: RPB_1557
Alternate gene names: 86748682
Gene position: 1756463-1755390 (Counterclockwise)
Preceding gene: 86748683
Following gene: 86748681
Centisome position: 32.94
GC content: 63.31
Gene sequence:
>1074_bases ATGGCAAGCCCGTCACTGATTCCCGCCGGCGATTTCCGCACCAGCTACGCCGCCGACACCACGATCTTCCCGACCAGGAC CAGCCGCAACGCGGCGATCCTCGGCATCGTGCTGATCTCGTTCGCGCCGCTGGTGCTGTCGGGCTACTGGCTGAGCGTGC TGATCCAGATCGGCATTTTCGGCATCGCCGCGCTCGGCCTGAACATCCTGGTCGGCTTCACCGGGCAGATCTCGATCGGC CACGCCGCGTTCTTCCTGCTCGGCGCCTACACCTCGGCCTATCTCAACAACAATCTGCCGATCCCGGTATTCTTCACCAT CCCGCTCGCCGGCGTGATCACCGCCCTGGTCGGCCTCGTGTTCGGGCTGCCGGCGGCGCGGCTGAAGGGGCTGTATCTCG TCATCGCGACGCTGGCGGCGCAATACATCCTGATCGACTTCTTCTCCCGCGCCGAATGGTTCTCCGGCGGCTCGGTGCCG GCCTCGGCCAATCCGTTCTCGCTGTTCGGCTACATGCTGCGCGGCGACAAGCAATATTTCTACGTCGTGCTGGTCTATCT CCTGGTCAGCTATCTGCTGGTGACCAATCTGATGCGGAGCCGCGACGGCCGGGCGCTGGTGGCGGTGCGCGACCATTATC TCTCCGCCGAGATCATGGGCATCAACCTCACCAAATATCGCACGCTGTCGTTCGGCCTCGCCGCGTTCTTTGCCGGCATC GCGGGCGCGCTGTACGCGCATTACCAGCTCGTGGTGTCGAACGAAGGCTTCGGCATCGAGCGCTCGATCCTGTTCCTGGC GATGATCATCATCGGCGGCATCGGCTCGATCTCGGGCACGCTGATGGGCACGGCTTTCGTCGTGCTGCTGCCGGAAGCGA TGGAATGGATCAGCATGGAGCTGAAGGGCGGCGTCATCGACCGCGCGTTGCAGCTCAACAACAATCTGACCTTCCTGCGC GAGATCGCGATCGGCCTGATCATCATCGCCTTCCTGGTGTTCGAGCCGGACGGCCTGGCGCACCGCTGGCGGCAGATCAA GGCGTACTGGAAACTCTACCCGTTTTCGCATTGA
Upstream 100 bases:
>100_bases GGCAATCTCTACGAGATCGCGCCGTTCTACGTGCTGATCATCATCCTGATGATCAAGCCCTACGGCCTGTTCGGCACCAA GGACATCGAGCGCATCTGAC
Downstream 100 bases:
>100_bases GGCCGGAACGACACGACACCACCAAAAACTCGACAAGAACCACAGGAGGAGAACCAAGCATGACGATGAAATCACTGTTG AGCACGGCGTCGCTGGCGCT
Product: inner-membrane translocator
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MASPSLIPAGDFRTSYAADTTIFPTRTSRNAAILGIVLISFAPLVLSGYWLSVLIQIGIFGIAALGLNILVGFTGQISIG HAAFFLLGAYTSAYLNNNLPIPVFFTIPLAGVITALVGLVFGLPAARLKGLYLVIATLAAQYILIDFFSRAEWFSGGSVP ASANPFSLFGYMLRGDKQYFYVVLVYLLVSYLLVTNLMRSRDGRALVAVRDHYLSAEIMGINLTKYRTLSFGLAAFFAGI AGALYAHYQLVVSNEGFGIERSILFLAMIIIGGIGSISGTLMGTAFVVLLPEAMEWISMELKGGVIDRALQLNNNLTFLR EIAIGLIIIAFLVFEPDGLAHRWRQIKAYWKLYPFSH
Sequences:
>Translated_357_residues MASPSLIPAGDFRTSYAADTTIFPTRTSRNAAILGIVLISFAPLVLSGYWLSVLIQIGIFGIAALGLNILVGFTGQISIG HAAFFLLGAYTSAYLNNNLPIPVFFTIPLAGVITALVGLVFGLPAARLKGLYLVIATLAAQYILIDFFSRAEWFSGGSVP ASANPFSLFGYMLRGDKQYFYVVLVYLLVSYLLVTNLMRSRDGRALVAVRDHYLSAEIMGINLTKYRTLSFGLAAFFAGI AGALYAHYQLVVSNEGFGIERSILFLAMIIIGGIGSISGTLMGTAFVVLLPEAMEWISMELKGGVIDRALQLNNNLTFLR EIAIGLIIIAFLVFEPDGLAHRWRQIKAYWKLYPFSH >Mature_356_residues ASPSLIPAGDFRTSYAADTTIFPTRTSRNAAILGIVLISFAPLVLSGYWLSVLIQIGIFGIAALGLNILVGFTGQISIGH AAFFLLGAYTSAYLNNNLPIPVFFTIPLAGVITALVGLVFGLPAARLKGLYLVIATLAAQYILIDFFSRAEWFSGGSVPA SANPFSLFGYMLRGDKQYFYVVLVYLLVSYLLVTNLMRSRDGRALVAVRDHYLSAEIMGINLTKYRTLSFGLAAFFAGIA GALYAHYQLVVSNEGFGIERSILFLAMIIIGGIGSISGTLMGTAFVVLLPEAMEWISMELKGGVIDRALQLNNNLTFLRE IAIGLIIIAFLVFEPDGLAHRWRQIKAYWKLYPFSH
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG4177
COG function: function code E; ABC-type branched-chain amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789865, Length=262, Percent_Identity=30.1526717557252, Blast_Score=94, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 - InterPro: IPR021807 [H]
Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]
EC number: NA
Molecular weight: Translated: 38893; Mature: 38762
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASPSLIPAGDFRTSYAADTTIFPTRTSRNAAILGIVLISFAPLVLSGYWLSVLIQIGIF CCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIAALGLNILVGFTGQISIGHAAFFLLGAYTSAYLNNNLPIPVFFTIPLAGVITALVGLV HHHHHHHHHHEECCCCEEHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHH FGLPAARLKGLYLVIATLAAQYILIDFFSRAEWFSGGSVPASANPFSLFGYMLRGDKQYF HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHH YVVLVYLLVSYLLVTNLMRSRDGRALVAVRDHYLSAEIMGINLTKYRTLSFGLAAFFAGI HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEEEHHHHHHHHHHHHHHHHH AGALYAHYQLVVSNEGFGIERSILFLAMIIIGGIGSISGTLMGTAFVVLLPEAMEWISME HHHHHHHEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LKGGVIDRALQLNNNLTFLREIAIGLIIIAFLVFEPDGLAHRWRQIKAYWKLYPFSH HCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure ASPSLIPAGDFRTSYAADTTIFPTRTSRNAAILGIVLISFAPLVLSGYWLSVLIQIGIF CCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIAALGLNILVGFTGQISIGHAAFFLLGAYTSAYLNNNLPIPVFFTIPLAGVITALVGLV HHHHHHHHHHEECCCCEEHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHH FGLPAARLKGLYLVIATLAAQYILIDFFSRAEWFSGGSVPASANPFSLFGYMLRGDKQYF HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHH YVVLVYLLVSYLLVTNLMRSRDGRALVAVRDHYLSAEIMGINLTKYRTLSFGLAAFFAGI HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEEEHHHHHHHHHHHHHHHHH AGALYAHYQLVVSNEGFGIERSILFLAMIIIGGIGSISGTLMGTAFVVLLPEAMEWISME HHHHHHHEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LKGGVIDRALQLNNNLTFLREIAIGLIIIAFLVFEPDGLAHRWRQIKAYWKLYPFSH HCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043 [H]