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The map label for this gene is 86748654

Identifier: 86748654

GI number: 86748654

Start: 1722311

End: 1723528

Strand: Reverse

Name: 86748654

Synonym: RPB_1529

Alternate gene names: NA

Gene position: 1723528-1722311 (Counterclockwise)

Preceding gene: 86748667

Following gene: 86748649

Centisome position: 32.33

GC content: 63.63

Gene sequence:

>1218_bases
TTGAGTCGACGTAAGCGCATCGTGCTGTGCACCTTCGGCGTTCCGGATGAGCGGGACGGCGCAAGCCTGGTTATCATCCA
CAATTTCATCGCACCAATTCGTCACGCCGACGTCGATGTACTGCACGTCGTCCTGCTCGACGCCGACCCGAAGAGCGAGG
AGGCCTGCGACGCGTATCGTGCCGCAGCCGGCAACGATCACTTCCAGATAGTGGTCGCCCGGCCGGCGAAGCTGGTTACG
CAAGGCGCCACCTCGCATCGGCTGAACCGCGCGGGAACCGAAGATGCACATGCCGCCGCCAACGCGTTCCAAGCGGATCT
GGTGATCGCCTTCGATATCCTCCCGGCCTGGTTCGCGACGACCATCACAGCGCCACGCAAACTGGTGTGGCTCGGCGATC
TCAACTTCGAGACGACCTACTACCATGGCCTCTACAATCTGCAGGAACATCCCTGGCAGATCGTGACCTTCGCGAAATAT
TGGCTCGCCGCTCGGAATTGGCGACGGGTCTATGCCGATGTGCTGGCGCAGTTCGATGAGGTCCTGGTATCAGCCGCATC
GTCCGTCAAGCAGATCGCCGGCCTCGGGCTGAGCAACCACAGCTACCGCCCCTACCCTTGGCCGGTGAACGACGCGCCGG
TTGCACCGCATGCCAAGCCGGCGGTGCCGACATTCATGTTCTTCGGCAACCTGGTGGGACTGGGATCGCGCTCCGCGTTG
CATTTCATGATCGCCAAGGCCTATCCGAAATTGATCAGACATTGGGGACCGAACGGATTCCGCATTCTGATCGCCGGCCG
AGGCAACATCCCTTCGTGGTTCGCTTCCGCGATCGCCGACAAGCCGGAGTTCGTGCAGGTCGGTTTCGTCGAAGACCTGC
CCGCGACGCTGATGGCCTGCCACGGCGTGCTGGTCCCGATCGACGTACCTGTGGGCAACAGGACTCGTGTGCTCTACGCG
ATGAGTCAGGGCGCGCTGGTCATCGCGCATCGAAATGTCGCGCTCGGAAACCCGGCTCTGGTCGACGATCAAACGGCCGC
GCTGGCCGGCGACGGCGACGCGTTCGTCGCGCGCATGCGACGCGCGTTCGAGGACGAGGCGTGGGCCCGGCGCATCGGCG
AGGCAGGCCAGCGCGCATATCGCGAGAATTTTCACCCCGACCGCGCCGCCGGCGATTTCATGGCGAGAGTGACGTCCCAC
CTCGTCGCGCCGCGATGA

Upstream 100 bases:

>100_bases
TGTTCTTCGCAAACAATCCCTCGGATATCAAGCAAAATGCGCCGCGGAAGAGTGGCTCGGCGACAGCCCGGCATGTCCTG
CGCGAGCGGAGGATTGTCGT

Downstream 100 bases:

>100_bases
CGACAGCGACCATCGGCGAACCGCAATCCGTCAGCGCGTCCTGATCGTATCGACGTCTCGGCTGGTGTCCGCCGTCTCGT
AGCCGCGCAGCACCGTTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MSRRKRIVLCTFGVPDERDGASLVIIHNFIAPIRHADVDVLHVVLLDADPKSEEACDAYRAAAGNDHFQIVVARPAKLVT
QGATSHRLNRAGTEDAHAAANAFQADLVIAFDILPAWFATTITAPRKLVWLGDLNFETTYYHGLYNLQEHPWQIVTFAKY
WLAARNWRRVYADVLAQFDEVLVSAASSVKQIAGLGLSNHSYRPYPWPVNDAPVAPHAKPAVPTFMFFGNLVGLGSRSAL
HFMIAKAYPKLIRHWGPNGFRILIAGRGNIPSWFASAIADKPEFVQVGFVEDLPATLMACHGVLVPIDVPVGNRTRVLYA
MSQGALVIAHRNVALGNPALVDDQTAALAGDGDAFVARMRRAFEDEAWARRIGEAGQRAYRENFHPDRAAGDFMARVTSH
LVAPR

Sequences:

>Translated_405_residues
MSRRKRIVLCTFGVPDERDGASLVIIHNFIAPIRHADVDVLHVVLLDADPKSEEACDAYRAAAGNDHFQIVVARPAKLVT
QGATSHRLNRAGTEDAHAAANAFQADLVIAFDILPAWFATTITAPRKLVWLGDLNFETTYYHGLYNLQEHPWQIVTFAKY
WLAARNWRRVYADVLAQFDEVLVSAASSVKQIAGLGLSNHSYRPYPWPVNDAPVAPHAKPAVPTFMFFGNLVGLGSRSAL
HFMIAKAYPKLIRHWGPNGFRILIAGRGNIPSWFASAIADKPEFVQVGFVEDLPATLMACHGVLVPIDVPVGNRTRVLYA
MSQGALVIAHRNVALGNPALVDDQTAALAGDGDAFVARMRRAFEDEAWARRIGEAGQRAYRENFHPDRAAGDFMARVTSH
LVAPR
>Mature_404_residues
SRRKRIVLCTFGVPDERDGASLVIIHNFIAPIRHADVDVLHVVLLDADPKSEEACDAYRAAAGNDHFQIVVARPAKLVTQ
GATSHRLNRAGTEDAHAAANAFQADLVIAFDILPAWFATTITAPRKLVWLGDLNFETTYYHGLYNLQEHPWQIVTFAKYW
LAARNWRRVYADVLAQFDEVLVSAASSVKQIAGLGLSNHSYRPYPWPVNDAPVAPHAKPAVPTFMFFGNLVGLGSRSALH
FMIAKAYPKLIRHWGPNGFRILIAGRGNIPSWFASAIADKPEFVQVGFVEDLPATLMACHGVLVPIDVPVGNRTRVLYAM
SQGALVIAHRNVALGNPALVDDQTAALAGDGDAFVARMRRAFEDEAWARRIGEAGQRAYRENFHPDRAAGDFMARVTSHL
VAPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44597; Mature: 44466

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRKRIVLCTFGVPDERDGASLVIIHNFIAPIRHADVDVLHVVLLDADPKSEEACDAYR
CCCCCEEEEEEECCCCCCCCCEEEEEEHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHH
AAAGNDHFQIVVARPAKLVTQGATSHRLNRAGTEDAHAAANAFQADLVIAFDILPAWFAT
HCCCCCCEEEEEECCHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHEEEEEHHHHHHHHH
TITAPRKLVWLGDLNFETTYYHGLYNLQEHPWQIVTFAKYWLAARNWRRVYADVLAQFDE
HHCCCCEEEEEECCCCCEEEEECEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLVSAASSVKQIAGLGLSNHSYRPYPWPVNDAPVAPHAKPAVPTFMFFGNLVGLGSRSAL
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHH
HFMIAKAYPKLIRHWGPNGFRILIAGRGNIPSWFASAIADKPEFVQVGFVEDLPATLMAC
HHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHCCCCCEEEECCHHHHHHHHHHH
HGVLVPIDVPVGNRTRVLYAMSQGALVIAHRNVALGNPALVDDQTAALAGDGDAFVARMR
CCEEEEEECCCCCCEEEEEEECCCEEEEEECCEECCCCCEECCCCCEECCCCHHHHHHHH
RAFEDEAWARRIGEAGQRAYRENFHPDRAAGDFMARVTSHLVAPR
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SRRKRIVLCTFGVPDERDGASLVIIHNFIAPIRHADVDVLHVVLLDADPKSEEACDAYR
CCCCEEEEEEECCCCCCCCCEEEEEEHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHH
AAAGNDHFQIVVARPAKLVTQGATSHRLNRAGTEDAHAAANAFQADLVIAFDILPAWFAT
HCCCCCCEEEEEECCHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHEEEEEHHHHHHHHH
TITAPRKLVWLGDLNFETTYYHGLYNLQEHPWQIVTFAKYWLAARNWRRVYADVLAQFDE
HHCCCCEEEEEECCCCCEEEEECEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLVSAASSVKQIAGLGLSNHSYRPYPWPVNDAPVAPHAKPAVPTFMFFGNLVGLGSRSAL
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHH
HFMIAKAYPKLIRHWGPNGFRILIAGRGNIPSWFASAIADKPEFVQVGFVEDLPATLMAC
HHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHCCCCCEEEECCHHHHHHHHHHH
HGVLVPIDVPVGNRTRVLYAMSQGALVIAHRNVALGNPALVDDQTAALAGDGDAFVARMR
CCEEEEEECCCCCCEEEEEEECCCEEEEEECCEECCCCCEECCCCCEECCCCHHHHHHHH
RAFEDEAWARRIGEAGQRAYRENFHPDRAAGDFMARVTSHLVAPR
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA