| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is crp [C]
Identifier: 86748611
GI number: 86748611
Start: 1675732
End: 1676454
Strand: Reverse
Name: crp [C]
Synonym: RPB_1486
Alternate gene names: 86748611
Gene position: 1676454-1675732 (Counterclockwise)
Preceding gene: 86748612
Following gene: 86748610
Centisome position: 31.44
GC content: 68.05
Gene sequence:
>723_bases TTGGGACCAAGCATTGCAACCGAGGACATCGAGACGGTGGATGCCGCGCGGAGCGATGCGGGGACGCATCGCTTTTTGCT GCAGGCGCTACCGCCGCCCGACCTCGACCTGGTGATGCGCACCGGCCGGATCGTCTGGTTTCAGAACCGCGACTATCTGC TGCGGCAGGGCGAGCCGGGCGACGGCATCCACATCATCCTGAGCGGCGTTGTCGAAAGCACCTATGTTGGTCAGCAACAG CGCGAGCTGCTGCTGGCGACCTGGCATCAAGGAGACTTCGTCGGTGCTCCGCATGTGCTCGGTTATCATCTGCACAGCTG GTCGGCGCGGGCGCTGGGACGGGTCGAGGCGCTGCATCTCGACCAGCCGGCGATCCGCCGCCTGATCGCGCTGTCGCCGG CCTTCGCCGTTGCTCTGGTCGGCTGTCTCGGCTTCAAGGGCGAGGCCTATTCGGCGCTGGCGCAGACGCTGGGCGGCCAG AAGGTCGGCGAGCGGCTGGCGCTGCTGCTGCTGAAGCTGTGCGAGGCCGCAGCTCAGGACGGCGACGGCCCAATTCCGCT CGGCCGCATCACCCAGGCCAATCTGGCGCGGATGATCGGCGCCACGAGGCAGTCGATCAGCCTGGCGCTGACCCGGCTGC AGGACGACGGCGTGATTTCGGCGGGCGCCACCACGCTGGTCGTCAACGACCTCACCGCGCTGCGTCGGCACGCCGGCGAG TGA
Upstream 100 bases:
>100_bases GTGAGAGGCGCGATGCAGGCCGCCGCGACGTCCGCCTTTGCCGCATTGCCAATAGTGGCAACAGGCCGTAGCCTTTCAGG TGACGACCTGGAGGGCAGTG
Downstream 100 bases:
>100_bases GCCGCGGCGCGACATCACGGACGCGACCGCCGCAGCGTCGAACTGACAATTAATTGCTCACAATGAATCCGGAAATGCCG GATTTTGTCGGCGTCAACTC
Product: Crp/FNR family transcriptional regulator
Products: NA
Alternate protein names: CRP/FNR Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator Crp/Fnr Family; Cyclic-AMP Receptor-Like Protein
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MGPSIATEDIETVDAARSDAGTHRFLLQALPPPDLDLVMRTGRIVWFQNRDYLLRQGEPGDGIHIILSGVVESTYVGQQQ RELLLATWHQGDFVGAPHVLGYHLHSWSARALGRVEALHLDQPAIRRLIALSPAFAVALVGCLGFKGEAYSALAQTLGGQ KVGERLALLLLKLCEAAAQDGDGPIPLGRITQANLARMIGATRQSISLALTRLQDDGVISAGATTLVVNDLTALRRHAGE
Sequences:
>Translated_240_residues MGPSIATEDIETVDAARSDAGTHRFLLQALPPPDLDLVMRTGRIVWFQNRDYLLRQGEPGDGIHIILSGVVESTYVGQQQ RELLLATWHQGDFVGAPHVLGYHLHSWSARALGRVEALHLDQPAIRRLIALSPAFAVALVGCLGFKGEAYSALAQTLGGQ KVGERLALLLLKLCEAAAQDGDGPIPLGRITQANLARMIGATRQSISLALTRLQDDGVISAGATTLVVNDLTALRRHAGE >Mature_239_residues GPSIATEDIETVDAARSDAGTHRFLLQALPPPDLDLVMRTGRIVWFQNRDYLLRQGEPGDGIHIILSGVVESTYVGQQQR ELLLATWHQGDFVGAPHVLGYHLHSWSARALGRVEALHLDQPAIRRLIALSPAFAVALVGCLGFKGEAYSALAQTLGGQK VGERLALLLLKLCEAAAQDGDGPIPLGRITQANLARMIGATRQSISLALTRLQDDGVISAGATTLVVNDLTALRRHAGE
Specific function: This Protein Complexes With Cyclic AMP And Binds To Specific DNA Sites Near The Promoter To Regulate The Transcription Of Several Catabolite-Sensitive Operons. The Protein Induces A Severe Bend In The DNA. Acts As A Negative Regulator Of Its Own Synthesi
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789756, Length=201, Percent_Identity=25.8706467661692, Blast_Score=65, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25731; Mature: 25600
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPSIATEDIETVDAARSDAGTHRFLLQALPPPDLDLVMRTGRIVWFQNRDYLLRQGEPG CCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHEECCCEEEEECCCEEEECCCCC DGIHIILSGVVESTYVGQQQRELLLATWHQGDFVGAPHVLGYHLHSWSARALGRVEALHL CCCEEHHHHHHHHHHCCHHHHHEEEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHEEEC DQPAIRRLIALSPAFAVALVGCLGFKGEAYSALAQTLGGQKVGERLALLLLKLCEAAAQD CCHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC GDGPIPLGRITQANLARMIGATRQSISLALTRLQDDGVISAGATTLVVNDLTALRRHAGE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEHHHHHHHHHHCCC >Mature Secondary Structure GPSIATEDIETVDAARSDAGTHRFLLQALPPPDLDLVMRTGRIVWFQNRDYLLRQGEPG CCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHEECCCEEEEECCCEEEECCCCC DGIHIILSGVVESTYVGQQQRELLLATWHQGDFVGAPHVLGYHLHSWSARALGRVEALHL CCCEEHHHHHHHHHHCCHHHHHEEEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHEEEC DQPAIRRLIALSPAFAVALVGCLGFKGEAYSALAQTLGGQKVGERLALLLLKLCEAAAQD CCHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC GDGPIPLGRITQANLARMIGATRQSISLALTRLQDDGVISAGATTLVVNDLTALRRHAGE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA