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The map label for this gene is 86748605

Identifier: 86748605

GI number: 86748605

Start: 1669167

End: 1670144

Strand: Direct

Name: 86748605

Synonym: RPB_1480

Alternate gene names: NA

Gene position: 1669167-1670144 (Clockwise)

Preceding gene: 86748604

Following gene: 86748618

Centisome position: 31.31

GC content: 68.71

Gene sequence:

>978_bases
ATGGCCGAACCGTTCGAAGCCTACGACGATCTCGACGACATCGACGACCGTCTGCATGCCGCCGATGCCGGTGAACGCCG
GGTGGCGATCATCGCGCTGGCCAATTCCGGCGATCCCGGTGCGGTGACGCATCTCGACCGCATGACGGCCGATCCCGATC
CCGGAGTGCGGCAGCAGGTCGGGCTGGCGCTCGCCGAATTCGACGGCCCGGAGGCGGCGGCTGCGCTCGCCAAGCTGGTG
GTCGATCCGGAACAGGCGGTGGCGACGGCGGCGGCCGACGCGATGGCGGAGTTGAAAGATCCCGACAGCGCCGATGCGAT
CCTGCCACTGGTCGAGCATTCGCACGCTTTCGTGCGGATGGCGGCGCTGCGCGCACTCAAGGAATTGCGACGCAAGGATT
CGCTGAAGCCGGCGCTGGATGCGCTGCGCGACATCGACGCCTCGGTGCGGGTGCAGGCGATCGGCGTGATCGGCTTTCTC
AAGCTGGAAGAATCGATTCCGGCGCTGACAGCGGCGACTTCCGATCCGGATCCGCATGTCCGGCGCGCCGCAGTCAGCGC
ACTGGCGTTCTCGCAACTCAAGCCGGCCGCCGACTCCATCACCCGGGCGCTGTCCGACGGCGACTGGATGGTGCGCGAGA
TCGCCGCCGAGACGCTCGGCACCAATGCCAACGGCCCACAGGCCGCCGACGCGCTGATCGGAGCGGTCGCCGACGAGTTC
TGGCAGGTGCGGCTGAAGGCGGTGCGCAGCCTCGGCAAGCTGAAGGTGGCGCGCGGGGTGGCGCAGATCGGCGCGTGCAT
CGCGCATCAGCAGGCCAATCTGCGCAAGGAAGCCGCCGCCGCGCTCGGCGAGATCGCCGATCCAGCCGGCCAGAAATATC
TCGAGCCGGTGATCGACGACGCCGATCCCGAAGTGCGAAAAAACGCCCGCTGGGCGCTGCAGCGCATCGACGCCAAGCGT
AGCGCCAGCGGCGGGTGA

Upstream 100 bases:

>100_bases
CTTCATGGCCTATGACGAATGCTGGTACTGCATGCCGTGCGAAGCCGATTGCCCGACCGATGCCGTGAAGGTCAACATCC
CCTATCTGCTGAGGTGACTC

Downstream 100 bases:

>100_bases
GCTTCGCGTCTTCGTCATTCCGGGGCGCGCACAGCGACAGCTGCGAGCGAACCCGGAATCTCGCTGCGGTGATTTCGTCA
ACGTCACGATTCGTCGCGAG

Product: HEAT repeat-containing protein

Products: NA

Alternate protein names: HEAT Repeat-Containing Protein; PBS Lyase HEAT-Like Repeat Domain Protein; PBS Lyase HEAT Domain Protein Repeat-Containing Protein; Phycobiliprotein; Phycocyanin Alpha Phycocyanobilin Lyase Related Protein; Phycocyanin Alpha-Subunit Phycocyanobilin Lyase; Phycocyanin Alpha Phycocyanobilin Lyase; PBS Lyase HEAT-Like Repeat; HEAT Repeat; HEAT Repeat Protein; Peptidase; Signal Transduction Protein; HEAT Domain Containing Protein

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MAEPFEAYDDLDDIDDRLHAADAGERRVAIIALANSGDPGAVTHLDRMTADPDPGVRQQVGLALAEFDGPEAAAALAKLV
VDPEQAVATAAADAMAELKDPDSADAILPLVEHSHAFVRMAALRALKELRRKDSLKPALDALRDIDASVRVQAIGVIGFL
KLEESIPALTAATSDPDPHVRRAAVSALAFSQLKPAADSITRALSDGDWMVREIAAETLGTNANGPQAADALIGAVADEF
WQVRLKAVRSLGKLKVARGVAQIGACIAHQQANLRKEAAAALGEIADPAGQKYLEPVIDDADPEVRKNARWALQRIDAKR
SASGG

Sequences:

>Translated_325_residues
MAEPFEAYDDLDDIDDRLHAADAGERRVAIIALANSGDPGAVTHLDRMTADPDPGVRQQVGLALAEFDGPEAAAALAKLV
VDPEQAVATAAADAMAELKDPDSADAILPLVEHSHAFVRMAALRALKELRRKDSLKPALDALRDIDASVRVQAIGVIGFL
KLEESIPALTAATSDPDPHVRRAAVSALAFSQLKPAADSITRALSDGDWMVREIAAETLGTNANGPQAADALIGAVADEF
WQVRLKAVRSLGKLKVARGVAQIGACIAHQQANLRKEAAAALGEIADPAGQKYLEPVIDDADPEVRKNARWALQRIDAKR
SASGG
>Mature_324_residues
AEPFEAYDDLDDIDDRLHAADAGERRVAIIALANSGDPGAVTHLDRMTADPDPGVRQQVGLALAEFDGPEAAAALAKLVV
DPEQAVATAAADAMAELKDPDSADAILPLVEHSHAFVRMAALRALKELRRKDSLKPALDALRDIDASVRVQAIGVIGFLK
LEESIPALTAATSDPDPHVRRAAVSALAFSQLKPAADSITRALSDGDWMVREIAAETLGTNANGPQAADALIGAVADEFW
QVRLKAVRSLGKLKVARGVAQIGACIAHQQANLRKEAAAALGEIADPAGQKYLEPVIDDADPEVRKNARWALQRIDAKRS
ASGG

Specific function: Unknown

COG id: COG1413

COG function: function code C; FOG: HEAT repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34265; Mature: 34134

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEPFEAYDDLDDIDDRLHAADAGERRVAIIALANSGDPGAVTHLDRMTADPDPGVRQQV
CCCCCHHHCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCHHHHH
GLALAEFDGPEAAAALAKLVVDPEQAVATAAADAMAELKDPDSADAILPLVEHSHAFVRM
HHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
AALRALKELRRKDSLKPALDALRDIDASVRVQAIGVIGFLKLEESIPALTAATSDPDPHV
HHHHHHHHHHHHCCCCHHHHHHHHCCCHHEEEHHHHHHHHHHHHHCCHHEECCCCCCHHH
RRAAVSALAFSQLKPAADSITRALSDGDWMVREIAAETLGTNANGPQAADALIGAVADEF
HHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
WQVRLKAVRSLGKLKVARGVAQIGACIAHQQANLRKEAAAALGEIADPAGQKYLEPVIDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
ADPEVRKNARWALQRIDAKRSASGG
CCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AEPFEAYDDLDDIDDRLHAADAGERRVAIIALANSGDPGAVTHLDRMTADPDPGVRQQV
CCCCHHHCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCHHHHH
GLALAEFDGPEAAAALAKLVVDPEQAVATAAADAMAELKDPDSADAILPLVEHSHAFVRM
HHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
AALRALKELRRKDSLKPALDALRDIDASVRVQAIGVIGFLKLEESIPALTAATSDPDPHV
HHHHHHHHHHHHCCCCHHHHHHHHCCCHHEEEHHHHHHHHHHHHHCCHHEECCCCCCHHH
RRAAVSALAFSQLKPAADSITRALSDGDWMVREIAAETLGTNANGPQAADALIGAVADEF
HHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
WQVRLKAVRSLGKLKVARGVAQIGACIAHQQANLRKEAAAALGEIADPAGQKYLEPVIDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
ADPEVRKNARWALQRIDAKRSASGG
CCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA