| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is pntAA [H]
Identifier: 86748560
GI number: 86748560
Start: 1623949
End: 1625073
Strand: Direct
Name: pntAA [H]
Synonym: RPB_1435
Alternate gene names: 86748560
Gene position: 1623949-1625073 (Clockwise)
Preceding gene: 86748559
Following gene: 86748561
Centisome position: 30.46
GC content: 66.58
Gene sequence:
>1125_bases ATGAAAATTGCTGTTGCCAAAGAACTCGATGCTTCTGAACCGCGTGTCGCGGCGACGCCCGACACGGTGAAGAAGCTGAA GGCGCTGGGTGCCGACATCGTCGTCGAGCCGGGTGCCGGCATCAAGTCGGGTCTGCCGGATTCCGATTTCACCGCCGCCG GCGCCACCGTCAGCGCCGACGCGCTGAAGGACGCCGACATCATCCTCAAGGTGAAGCGTCCGGAAGCCTCCGAACTCGCC GCCTACAAGCGCGGCGCGCTGGTGATGGCGATCATGGACCCCTACGGCAACGACGCCGCGCTGAAGGCGATGGCCGACGC CGGCGTCACCGCCTTCGCGATGGAGCTGATGCCGCGCATCACCCGCGCGCAGGTGATGGACGTGCTGTCGAGCCAGGCCA ATCTCGCCGGCTATCGCGCGGTGATCGACGCCGCCGAGCAGTTCGGCCGGGTGTTTCCGATGATGATGACCGCGGCCGGC ACCGTGCCCGCCGCCAAGGTGTTCATCATGGGCGTCGGCGTCGCCGGCCTGCAGGCGATCGCCACCGCGCGCCGGCTCGG CGCCATCGTCACCGCGACCGACGTCCGCCCCGCCACCAAGGAGCAGGTCGAATCGTTGGGCGCCAAGTTCCTCGCGGTCG AGGACGAAGAGTTCAAGAACGCCCAGACCGCCGGCGGCTACGCCAAGGAAATGTCGAAAGAGTATCAGGCCAAGCAGGCC GCTCTGACCGCCGAACACATCAAGAAGCAGGACATCGTCATCACCACCGCGCTGATCCCGGGCCGGCCCGCGCCGCGCCT CGTCACCGCCGAGATGGTGCGCTCGATGAAACCGGGTTCGGTGCTGGTCGATCTGGCGGTCGAGCGCGGCGGCAACGTCG AAGGTGCAAAGCCCGGCGAAGTCGTCGAGACCGACGGCGTCAGGATCGTCGGTTACACCAATGTCGCCGGCCGCGTCGCG GCGTCGGCGTCCGCCCTGTATGCGCGCAATCTGTTCAGCTTCATCGAGACGCTGATCAACAAGGACAGCAAGGCGCTGGC GGTGAATTGGGACGACGATCTGGTCAAGGCCACCGCGCTGACGCGCGACGGCGCCGTCGTTCACCCGAACTTCCAGCCGA AATAA
Upstream 100 bases:
>100_bases ATGGCGATCTTCCTGACCTGACTTCGACCCTGAGTGCATCGCCGGAAAGCGGTGTCGAGACTGCCAGCTCACGCGCGCGC CAGGCGCCGCAGGAGGCTCC
Downstream 100 bases:
>100_bases AGGAAAGCCGCCATGGAGCATGTCGTGCAGGCCGTCGATCCGTTCGTGTTTCGGCTGTCGATTTTCGTTCTGGCCGTGTT CGTCGGCTATTTCGTGGTGT
Product: NAD(P)(+) transhydrogenase (AB-specific)
Products: NA
Alternate protein names: Nicotinamide nucleotide transhydrogenase subunit alpha 1; Proton-translocating transhydrogenase component 1; Pyridine nucleotide transhydrogenase subunit alpha 1; dI [H]
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MKIAVAKELDASEPRVAATPDTVKKLKALGADIVVEPGAGIKSGLPDSDFTAAGATVSADALKDADIILKVKRPEASELA AYKRGALVMAIMDPYGNDAALKAMADAGVTAFAMELMPRITRAQVMDVLSSQANLAGYRAVIDAAEQFGRVFPMMMTAAG TVPAAKVFIMGVGVAGLQAIATARRLGAIVTATDVRPATKEQVESLGAKFLAVEDEEFKNAQTAGGYAKEMSKEYQAKQA ALTAEHIKKQDIVITTALIPGRPAPRLVTAEMVRSMKPGSVLVDLAVERGGNVEGAKPGEVVETDGVRIVGYTNVAGRVA ASASALYARNLFSFIETLINKDSKALAVNWDDDLVKATALTRDGAVVHPNFQPK
Sequences:
>Translated_374_residues MKIAVAKELDASEPRVAATPDTVKKLKALGADIVVEPGAGIKSGLPDSDFTAAGATVSADALKDADIILKVKRPEASELA AYKRGALVMAIMDPYGNDAALKAMADAGVTAFAMELMPRITRAQVMDVLSSQANLAGYRAVIDAAEQFGRVFPMMMTAAG TVPAAKVFIMGVGVAGLQAIATARRLGAIVTATDVRPATKEQVESLGAKFLAVEDEEFKNAQTAGGYAKEMSKEYQAKQA ALTAEHIKKQDIVITTALIPGRPAPRLVTAEMVRSMKPGSVLVDLAVERGGNVEGAKPGEVVETDGVRIVGYTNVAGRVA ASASALYARNLFSFIETLINKDSKALAVNWDDDLVKATALTRDGAVVHPNFQPK >Mature_374_residues MKIAVAKELDASEPRVAATPDTVKKLKALGADIVVEPGAGIKSGLPDSDFTAAGATVSADALKDADIILKVKRPEASELA AYKRGALVMAIMDPYGNDAALKAMADAGVTAFAMELMPRITRAQVMDVLSSQANLAGYRAVIDAAEQFGRVFPMMMTAAG TVPAAKVFIMGVGVAGLQAIATARRLGAIVTATDVRPATKEQVESLGAKFLAVEDEEFKNAQTAGGYAKEMSKEYQAKQA ALTAEHIKKQDIVITTALIPGRPAPRLVTAEMVRSMKPGSVLVDLAVERGGNVEGAKPGEVVETDGVRIVGYTNVAGRVA ASASALYARNLFSFIETLINKDSKALAVNWDDDLVKATALTRDGAVVHPNFQPK
Specific function: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane [H]
COG id: COG3288
COG function: function code C; NAD/NADP transhydrogenase alpha subunit
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlaDH/PNT family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=388, Percent_Identity=40.979381443299, Blast_Score=261, Evalue=9e-70, Organism=Homo sapiens, GI122939153, Length=388, Percent_Identity=40.979381443299, Blast_Score=261, Evalue=9e-70, Organism=Escherichia coli, GI1787887, Length=371, Percent_Identity=44.743935309973, Blast_Score=310, Evalue=1e-85, Organism=Caenorhabditis elegans, GI17550456, Length=365, Percent_Identity=46.027397260274, Blast_Score=315, Evalue=3e-86,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007698 - InterPro: IPR008142 - InterPro: IPR008143 - InterPro: IPR007886 [H]
Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]
EC number: =1.6.1.2 [H]
Molecular weight: Translated: 39212; Mature: 39212
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: PS00837 ALADH_PNT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAVAKELDASEPRVAATPDTVKKLKALGADIVVEPGAGIKSGLPDSDFTAAGATVSAD CCEEEECCCCCCCCCEECCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCEEEHH ALKDADIILKVKRPEASELAAYKRGALVMAIMDPYGNDAALKAMADAGVTAFAMELMPRI HCCCCEEEEEECCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHH TRAQVMDVLSSQANLAGYRAVIDAAEQFGRVFPMMMTAAGTVPAAKVFIMGVGVAGLQAI HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEECCHHHHHHH ATARRLGAIVTATDVRPATKEQVESLGAKFLAVEDEEFKNAQTAGGYAKEMSKEYQAKQA HHHHHHCEEEEECCCCCCHHHHHHHCCCEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHH ALTAEHIKKQDIVITTALIPGRPAPRLVTAEMVRSMKPGSVLVDLAVERGGNVEGAKPGE HHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCC VVETDGVRIVGYTNVAGRVAASASALYARNLFSFIETLINKDSKALAVNWDDDLVKATAL EEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHEE TRDGAVVHPNFQPK ECCCCEECCCCCCC >Mature Secondary Structure MKIAVAKELDASEPRVAATPDTVKKLKALGADIVVEPGAGIKSGLPDSDFTAAGATVSAD CCEEEECCCCCCCCCEECCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCEEEHH ALKDADIILKVKRPEASELAAYKRGALVMAIMDPYGNDAALKAMADAGVTAFAMELMPRI HCCCCEEEEEECCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHH TRAQVMDVLSSQANLAGYRAVIDAAEQFGRVFPMMMTAAGTVPAAKVFIMGVGVAGLQAI HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEECCHHHHHHH ATARRLGAIVTATDVRPATKEQVESLGAKFLAVEDEEFKNAQTAGGYAKEMSKEYQAKQA HHHHHHCEEEEECCCCCCHHHHHHHCCCEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHH ALTAEHIKKQDIVITTALIPGRPAPRLVTAEMVRSMKPGSVLVDLAVERGGNVEGAKPGE HHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCC VVETDGVRIVGYTNVAGRVAASASALYARNLFSFIETLINKDSKALAVNWDDDLVKATAL EEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHEE TRDGAVVHPNFQPK ECCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8075801 [H]