Click here to switch to the map view.

The map label for this gene is 86748510

Identifier: 86748510

GI number: 86748510

Start: 1576607

End: 1578271

Strand: Direct

Name: 86748510

Synonym: RPB_1385

Alternate gene names: NA

Gene position: 1576607-1578271 (Clockwise)

Preceding gene: 86748509

Following gene: 86748513

Centisome position: 29.57

GC content: 64.08

Gene sequence:

>1665_bases
TTGAGTAGAAGCTTGATTCGCCTAGTCTCCATCATCGCGCTGATCGCCGTCGTCGGGATGCTGCTGTCCGGCTTCGCGGC
ATATCGGATCTATGAACAGGAATCGGCGGTCGAGCGGATCGCGCTGGGCCGGGCGATCGACGTGCATGCCAGCCAGGTTC
AGGATCGGCTGACCGAGCGGGAACTGCTCGGCAGGGTTGCGTCTGGCTTGTTTCGCACGCCTGCGGTGATCAGGGCGGAC
ATGCTGCAGCCGCTGCGCTCGTCGATTTACGCCTTCAAGGCCGACTTCCTGCTGGCGAGCTGGATCGTCAGGCTGAAGCC
CGAAGAGTTCGCTGCCGCGCAGGCCGAACTGGCCAAGGCCGGCTTTTCCGACACCACAATCCGCCATTCCGACGGGACCC
CGATTGATCCGTCCACGCTTCGCGATCCGGTCGACGTGGTGATGGACATCGAGCCGCGTAATGCCGAAACCGTTGCGCTG
CCGGGGCGATCGCTCGACGACCATCCGGTTCTGGGGCGAATGTTCGCCCGCTCGCTCGAGTCCGGGAAGCCGGAAGCCTC
GGACCCATTGCGTCTGGGCGCCGCCGATGGGCCGATCGGTGTGGTATTGGCGGCGCCGGTGATGACCGAAGACGCCTCGG
CGGCGGTCGGATTCATCACCTTTTCCTACGATCTCTCGGCGCTGATGCTGACGAACGACGATATGTCGATGTTTTCCGTG
GTGCTCGCCGATCCGCGGAAACCCGATGTCGAACTGCTTGCCGACGAGCGCGGCCGGGTGACTGAACGGCCGGCGCACCC
GAACGGCGAGAGGCCGATGATGGTCCGGACCATGACCTTCGGTGATCGCGACTGGTCGCTGGCCTACTACGCGCGTGTCA
GTCCGTTCGTCCGCGCTCAGCAGGTCGCGGCAATCGTCGCTGCAATCGGCCTGGCGCTCACCTTCATCATCTGCGGCCTG
TTCGGTTACGTCAGCAACAGCAACGTCAGGCTGCGGCGCGAAATCGAGATGCGGATCGGCTTCGAGCGACGCCTGACTGC
GGTGATCGACGAGCTCAACCACCGGGTCAAGAATATCCTGGCCGTGATCCAGTCGATCGTGACGCGGACGCTGCGGCACG
GTTCGGACGTCGACGTCGCCCGCGAACTGCTGATCGGGCGCATCCATGCCATGTCCAACGTCGTCTCGCTGCTGAGCGAG
AGCCAATGGCAGGGCGTGATGCTGAAGGGGCTTTTCGAAGCGAGGGCAATCCCGCATGCAGACCGCATCGCGGTCAACGG
CCCGGACATCGCGGTGAGCGCGCGTGCGGCGCAGAGTCTGTCTCTGCTGTTCTTCGAGCTCGCTTCGCACTCCGACGAGG
GATTGTCGCTGGTCGGCAAGCACCCGCACATCGTTGCGAGCTGGGAAGTGAAGGGCGAGGGGGCCGATTCGGTGTTCAGC
TTCCGCTGGGAGGAGTTCAACACCAGCGAGGCGACGCGGCGTCCCGACAGCGAATTCGGGGTCATTCTGCTCGATCGCGT
CGCTCCGGAAGCACTCGGTGGCACGTCCAAACGCCATTTCACCGACCTCAGCTATGTCTATGAGCTGACCGCGCCGATGG
AAACCGTCGTCGACATCAACGAAAGAGACCGCACCGGCCAGATCTCGGCGCCGCTCCGCCGCTAG

Upstream 100 bases:

>100_bases
CAAAGGATGGTTGTCCTCCACGGTACGTGCGACGACATTGCTTGGCCAATCTCGTCGGCATTGGCATGATGATGGATGGC
ATCGGCCCTCCACTCGTTGA

Downstream 100 bases:

>100_bases
AGCTTTTCCGGTCTGCTAGAATTATCACGCGAGCCGGCCCAGCCGCCCCACGCGCAGCAGGGCCTCGATCCCGCAACGTC
AGGCCGCAATAACGAAGAGG

Product: signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 554; Mature: 553

Protein sequence:

>554_residues
MSRSLIRLVSIIALIAVVGMLLSGFAAYRIYEQESAVERIALGRAIDVHASQVQDRLTERELLGRVASGLFRTPAVIRAD
MLQPLRSSIYAFKADFLLASWIVRLKPEEFAAAQAELAKAGFSDTTIRHSDGTPIDPSTLRDPVDVVMDIEPRNAETVAL
PGRSLDDHPVLGRMFARSLESGKPEASDPLRLGAADGPIGVVLAAPVMTEDASAAVGFITFSYDLSALMLTNDDMSMFSV
VLADPRKPDVELLADERGRVTERPAHPNGERPMMVRTMTFGDRDWSLAYYARVSPFVRAQQVAAIVAAIGLALTFIICGL
FGYVSNSNVRLRREIEMRIGFERRLTAVIDELNHRVKNILAVIQSIVTRTLRHGSDVDVARELLIGRIHAMSNVVSLLSE
SQWQGVMLKGLFEARAIPHADRIAVNGPDIAVSARAAQSLSLLFFELASHSDEGLSLVGKHPHIVASWEVKGEGADSVFS
FRWEEFNTSEATRRPDSEFGVILLDRVAPEALGGTSKRHFTDLSYVYELTAPMETVVDINERDRTGQISAPLRR

Sequences:

>Translated_554_residues
MSRSLIRLVSIIALIAVVGMLLSGFAAYRIYEQESAVERIALGRAIDVHASQVQDRLTERELLGRVASGLFRTPAVIRAD
MLQPLRSSIYAFKADFLLASWIVRLKPEEFAAAQAELAKAGFSDTTIRHSDGTPIDPSTLRDPVDVVMDIEPRNAETVAL
PGRSLDDHPVLGRMFARSLESGKPEASDPLRLGAADGPIGVVLAAPVMTEDASAAVGFITFSYDLSALMLTNDDMSMFSV
VLADPRKPDVELLADERGRVTERPAHPNGERPMMVRTMTFGDRDWSLAYYARVSPFVRAQQVAAIVAAIGLALTFIICGL
FGYVSNSNVRLRREIEMRIGFERRLTAVIDELNHRVKNILAVIQSIVTRTLRHGSDVDVARELLIGRIHAMSNVVSLLSE
SQWQGVMLKGLFEARAIPHADRIAVNGPDIAVSARAAQSLSLLFFELASHSDEGLSLVGKHPHIVASWEVKGEGADSVFS
FRWEEFNTSEATRRPDSEFGVILLDRVAPEALGGTSKRHFTDLSYVYELTAPMETVVDINERDRTGQISAPLRR
>Mature_553_residues
SRSLIRLVSIIALIAVVGMLLSGFAAYRIYEQESAVERIALGRAIDVHASQVQDRLTERELLGRVASGLFRTPAVIRADM
LQPLRSSIYAFKADFLLASWIVRLKPEEFAAAQAELAKAGFSDTTIRHSDGTPIDPSTLRDPVDVVMDIEPRNAETVALP
GRSLDDHPVLGRMFARSLESGKPEASDPLRLGAADGPIGVVLAAPVMTEDASAAVGFITFSYDLSALMLTNDDMSMFSVV
LADPRKPDVELLADERGRVTERPAHPNGERPMMVRTMTFGDRDWSLAYYARVSPFVRAQQVAAIVAAIGLALTFIICGLF
GYVSNSNVRLRREIEMRIGFERRLTAVIDELNHRVKNILAVIQSIVTRTLRHGSDVDVARELLIGRIHAMSNVVSLLSES
QWQGVMLKGLFEARAIPHADRIAVNGPDIAVSARAAQSLSLLFFELASHSDEGLSLVGKHPHIVASWEVKGEGADSVFSF
RWEEFNTSEATRRPDSEFGVILLDRVAPEALGGTSKRHFTDLSYVYELTAPMETVVDINERDRTGQISAPLRR

Specific function: Photosensitive kinase that is involved in increased bacterial virulence upon exposure to light [H]

COG id: COG3920

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR013655
- InterPro:   IPR011102 [H]

Pfam domain/function: PF07536 HWE_HK; PF00989 PAS; PF08447 PAS_3 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 60898; Mature: 60766

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: PS50839 CHASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRSLIRLVSIIALIAVVGMLLSGFAAYRIYEQESAVERIALGRAIDVHASQVQDRLTER
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHH
ELLGRVASGLFRTPAVIRADMLQPLRSSIYAFKADFLLASWIVRLKPEEFAAAQAELAKA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
GFSDTTIRHSDGTPIDPSTLRDPVDVVMDIEPRNAETVALPGRSLDDHPVLGRMFARSLE
CCCCCEEECCCCCCCCHHHHCCCCCEEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHH
SGKPEASDPLRLGAADGPIGVVLAAPVMTEDASAAVGFITFSYDLSALMLTNDDMSMFSV
CCCCCCCCCEEECCCCCCEEEEEECCEECCCCCCEEEEEEEEECCEEEEEECCCHHHHHH
VLADPRKPDVELLADERGRVTERPAHPNGERPMMVRTMTFGDRDWSLAYYARVSPFVRAQ
HCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEECCCHHHHHH
QVAAIVAAIGLALTFIICGLFGYVSNSNVRLRREIEMRIGFERRLTAVIDELNHRVKNIL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCHHHHHHHHHHHHHHHHHHHH
AVIQSIVTRTLRHGSDVDVARELLIGRIHAMSNVVSLLSESQWQGVMLKGLFEARAIPHA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCC
DRIAVNGPDIAVSARAAQSLSLLFFELASHSDEGLSLVGKHPHIVASWEVKGEGADSVFS
CEEEECCCCEEEEHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEEEEECCCCCCCHHE
FRWEEFNTSEATRRPDSEFGVILLDRVAPEALGGTSKRHFTDLSYVYELTAPMETVVDIN
EECCCCCCCHHCCCCCCCCCEEEEECCCHHHHCCCCCHHHHHHHHHHHHHCCHHHHHCCC
ERDRTGQISAPLRR
CCCCCCCCCCCCCC
>Mature Secondary Structure 
SRSLIRLVSIIALIAVVGMLLSGFAAYRIYEQESAVERIALGRAIDVHASQVQDRLTER
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHH
ELLGRVASGLFRTPAVIRADMLQPLRSSIYAFKADFLLASWIVRLKPEEFAAAQAELAKA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
GFSDTTIRHSDGTPIDPSTLRDPVDVVMDIEPRNAETVALPGRSLDDHPVLGRMFARSLE
CCCCCEEECCCCCCCCHHHHCCCCCEEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHH
SGKPEASDPLRLGAADGPIGVVLAAPVMTEDASAAVGFITFSYDLSALMLTNDDMSMFSV
CCCCCCCCCEEECCCCCCEEEEEECCEECCCCCCEEEEEEEEECCEEEEEECCCHHHHHH
VLADPRKPDVELLADERGRVTERPAHPNGERPMMVRTMTFGDRDWSLAYYARVSPFVRAQ
HCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEECCCHHHHHH
QVAAIVAAIGLALTFIICGLFGYVSNSNVRLRREIEMRIGFERRLTAVIDELNHRVKNIL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCHHHHHHHHHHHHHHHHHHHH
AVIQSIVTRTLRHGSDVDVARELLIGRIHAMSNVVSLLSESQWQGVMLKGLFEARAIPHA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCC
DRIAVNGPDIAVSARAAQSLSLLFFELASHSDEGLSLVGKHPHIVASWEVKGEGADSVFS
CEEEECCCCEEEEHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEEEEECCCCCCCHHE
FRWEEFNTSEATRRPDSEFGVILLDRVAPEALGGTSKRHFTDLSYVYELTAPMETVVDIN
EECCCCCCCHHCCCCCCCCCEEEEECCCHHHHCCCCCHHHHHHHHHHHHHCCHHHHHCCC
ERDRTGQISAPLRR
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA