| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86748507
Identifier: 86748507
GI number: 86748507
Start: 1574847
End: 1575257
Strand: Reverse
Name: 86748507
Synonym: RPB_1382
Alternate gene names: NA
Gene position: 1575257-1574847 (Counterclockwise)
Preceding gene: 86748511
Following gene: 86748506
Centisome position: 29.55
GC content: 65.69
Gene sequence:
>411_bases ATGACTTCATCGACGCCACCAAATAACGAGCTCGTTGCGCGATCTGCAACGCCCGACGGCCGCTCGGCCGCCTCGGCGCC CCAGAACCGGCCCGGGCCGAGTCCGCGGTCGGTGGGGACGCAATCGGCCGCATCCTCCCCTGCGGCCGATACCAAGCACG GCACCCCAGCGCCGGCGAACAGTCCCGCGACGGTTCCGGAGTCCCGATCCCCGACCGTGAAGGCGGCGGCGCCGGATGCA ACTCCCAATATCATGACAAGCACGGCCGACGAGCGAGCCGAGATACTGAAACGCATTGCTGCATTCCGAAATTTGCAGAT CAAGCTGCGTCAGGACCGCGAAAAGTACTACGACCAGACGTTGGCGCGCACGCGATCGCTGCTGTCCCAACCGATGAAGC CGCGCCGCTGA
Upstream 100 bases:
>100_bases CAAGCGAACCGCAGAATTATCCACCGGTTGCAGGACCGCATCAGCATTGCCGATTGACGCCCGGGCAGCAGTGCAATCAA TGATGCAATCGGGGATTACA
Downstream 100 bases:
>100_bases GCGGCTGTTCGCGCCCCCGGTTAGTCTCACTACGTCTTTGGTTGCACGGATATCCCGCGATGCGGGCGTATCGCACCACT TTGCACGCAGCATCCGAACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MTSSTPPNNELVARSATPDGRSAASAPQNRPGPSPRSVGTQSAASSPAADTKHGTPAPANSPATVPESRSPTVKAAAPDA TPNIMTSTADERAEILKRIAAFRNLQIKLRQDREKYYDQTLARTRSLLSQPMKPRR
Sequences:
>Translated_136_residues MTSSTPPNNELVARSATPDGRSAASAPQNRPGPSPRSVGTQSAASSPAADTKHGTPAPANSPATVPESRSPTVKAAAPDA TPNIMTSTADERAEILKRIAAFRNLQIKLRQDREKYYDQTLARTRSLLSQPMKPRR >Mature_135_residues TSSTPPNNELVARSATPDGRSAASAPQNRPGPSPRSVGTQSAASSPAADTKHGTPAPANSPATVPESRSPTVKAAAPDAT PNIMTSTADERAEILKRIAAFRNLQIKLRQDREKYYDQTLARTRSLLSQPMKPRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14488; Mature: 14357
Theoretical pI: Translated: 11.46; Mature: 11.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSTPPNNELVARSATPDGRSAASAPQNRPGPSPRSVGTQSAASSPAADTKHGTPAPAN CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SPATVPESRSPTVKAAAPDATPNIMTSTADERAEILKRIAAFRNLQIKLRQDREKYYDQT CCCCCCCCCCCEEECCCCCCCCCCHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LARTRSLLSQPMKPRR HHHHHHHHHCCCCCCC >Mature Secondary Structure TSSTPPNNELVARSATPDGRSAASAPQNRPGPSPRSVGTQSAASSPAADTKHGTPAPAN CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SPATVPESRSPTVKAAAPDATPNIMTSTADERAEILKRIAAFRNLQIKLRQDREKYYDQT CCCCCCCCCCCEEECCCCCCCCCCHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LARTRSLLSQPMKPRR HHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA