| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is fusA [C]
Identifier: 86748425
GI number: 86748425
Start: 1481960
End: 1484026
Strand: Direct
Name: fusA [C]
Synonym: RPB_1300
Alternate gene names: 86748425
Gene position: 1481960-1484026 (Clockwise)
Preceding gene: 86748424
Following gene: 86748426
Centisome position: 27.8
GC content: 68.12
Gene sequence:
>2067_bases ATGGGACAAGACCTCAGAAGTCCCCCAAATACTAAAGAATCGGGTCCCCGGTGCATTGCATTGGTGGGCCCATTCCAAAG CGGAAAAACCACACTGCTCGAAGCGATCCTCGCGCGTACCGGCGCCGTGCCGCGCGCCGGCTCGGTCGATGCTGGTACCT CGTATGGCGACTCCAGCCCGGAAGCGCGCCAGCACAAGATGGGGCTCGGCCTCACCGCGGCGACCACGCAGTTCATGGGC GAGACCTACACCTTCCTCGATTGTCCGGGCTCGGTCGAATTCGCGCACGACATGCGCGCCGCGCTGCCCGCGGTCGATGC CGCCGTCGTGGTGTGCGAGGCCGACGAGCGCAAGCTGCCGCAATTGCAGATCATCCTGCGCGAGCTCGAAGATCTCGGGA TTCCGCGCTTCCTGTTTCTCAACAAGATCGATCGCGCCACCAAACGCATCCGCGAAGTGCTCGACAGCCTGCAGCCGGCC TCGCGAATCCCGCTGGTGCTGCGCCAGATCCCGATCTGGAACGGCGACCTGATCGCTGGCTATGTCGATCTCGCGCTGGA GCGCGCCTTCGTCTATCGCGAGCACAAACCCTCCGAAGTGATCGCGCTGGAAGGCGGCGATCTCGACCGCGAGAAGGAAG CCCGCTTCTCGATGCTGGAGAAGCTCGCCGATCACGACGACGCGCTGATGGAGCAATTGCTCGAAGACATTCCGCCGCCG CGCGACACGGTGTTCGACGATCTCGCGCGCGAACTGCGCGAAGGCGTGATCTGCCCGGTGCTGCTGGGCTCGGCGCTGCG CGAGAACGGCGTGATGCGGCTGTTGAAGGCGCTGCGCCACGAAGCCCCCGACGTCGAAGAGACCGCGTCGCGGCTCGGCG TCGCGGCGTCCAAGGACGCGGTCGGCTACGTGCTGAAGACCACCCATCTGCAGCACGGCGGCAAGCTGTCGCTGGCGCGG GTGTTCGCCGGCACGTTGGCCGACGGCGACACCGTGCACGCACCGTCCGGCGAAGCCGCGCGGGTGTCGGGCATCCACAC CGCGAATGGCGGCGCCGACAGCAAGCGCTCGTCGGCGGTGGCCGGTGAGGTGGTCGCACTCGGCAAGCTCGACGCGATCA AGACCGGCGATACGTTCGGCAACGGCAAGACCGCGCCCTCGGCGCTGGTCGAGATCGCGCCCGCACCGCCGGTGCTGGCG ATGGCGCTGGCCGCCGCCGACCGCAAGGACGACGTCAAGCTCGGCCAGTCGCTGCAGCGGCTTTCCGAGGAAGACCCGTC GCTGACCGTGATTCACGATCCGCAGACCCACGACATCGTGCTGTGGGGGCAGGGCGAAATGCACCTGCGCGTCGCGCTGG AGCGGCTCAAGGAGCGCTACGGCGTTTCGGTGAAGTCGCATCCACCGACGATCGGCTATCGCGAGACCATCCGCAAATCG GCGACGCAGCGCGGCCGGCACAAGAAGCAGTCCGGCGGCCACGGCCAGTTCGGCGACGTGGTGCTGGAGGTGAAGCCGTT GCCGCGTGGCGAGGGCTTCGTCTTCGCCGAGACGGTGGTCGGCGGCGCGGTGCCGCGCAACTACATCGGCGCGGTCGAAG AAGGCGCGGTCGATGGCCTGCGCGCGGGGCCGCTCGGCTTCCCGGTGGTCGACGTCCACGTCACGCTGACCGACGGCTCG TATCACAGCGTCGATTCCTCGGATCAGGCGTTCCGCACCGCGGCGCGGATCGGCATCACCGAGGCGCTGCCGCAGTGCCA GCCGGTGCTGCTGGAGCCGATCCACAATGTCGAGATCGTCTGCCCGAACGACGCCACCGCCAAGGTCAACGCCATCCTGT CGGGACGACGCGGCCAGATCCTCGGCTTCGATACCCGCGAGGGCTGGCCGGGCTGGGACGTGGTCCGCGCCACCCTGCCG GAGGCGGAGATCGGCGATCTGATCGTCGAACTGCGCTCCGCCACCGCCGGCGCCGGCAGTTTCACCCGCAGCTTCGACCA TATGGCCGAAGTCAACGGCCGCACCGCGGATCAGATCGTCGCCGCGCGCCGGCAGGTCGCGGCGTGA
Upstream 100 bases:
>100_bases GCAAGCTTCGTAATTTTTCGCGCTTGCCAAGCGGCGAGGCTGCTGAAAGCATTGCCTCGCCGACCCAATCAAGGGCCGAG CTCCAGACAAGGAGGCGGCG
Downstream 100 bases:
>100_bases GCTGACCGGCGGGGTCGCAGACGCAGAGTCGAAAACGGCTTCAATGATGTTTCAAGCATCATTGAAGCCGTTTTATATTT GCGCTAGCCGATAGGGCGGA
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: NA
Number of amino acids: Translated: 688; Mature: 687
Protein sequence:
>688_residues MGQDLRSPPNTKESGPRCIALVGPFQSGKTTLLEAILARTGAVPRAGSVDAGTSYGDSSPEARQHKMGLGLTAATTQFMG ETYTFLDCPGSVEFAHDMRAALPAVDAAVVVCEADERKLPQLQIILRELEDLGIPRFLFLNKIDRATKRIREVLDSLQPA SRIPLVLRQIPIWNGDLIAGYVDLALERAFVYREHKPSEVIALEGGDLDREKEARFSMLEKLADHDDALMEQLLEDIPPP RDTVFDDLARELREGVICPVLLGSALRENGVMRLLKALRHEAPDVEETASRLGVAASKDAVGYVLKTTHLQHGGKLSLAR VFAGTLADGDTVHAPSGEAARVSGIHTANGGADSKRSSAVAGEVVALGKLDAIKTGDTFGNGKTAPSALVEIAPAPPVLA MALAAADRKDDVKLGQSLQRLSEEDPSLTVIHDPQTHDIVLWGQGEMHLRVALERLKERYGVSVKSHPPTIGYRETIRKS ATQRGRHKKQSGGHGQFGDVVLEVKPLPRGEGFVFAETVVGGAVPRNYIGAVEEGAVDGLRAGPLGFPVVDVHVTLTDGS YHSVDSSDQAFRTAARIGITEALPQCQPVLLEPIHNVEIVCPNDATAKVNAILSGRRGQILGFDTREGWPGWDVVRATLP EAEIGDLIVELRSATAGAGSFTRSFDHMAEVNGRTADQIVAARRQVAA
Sequences:
>Translated_688_residues MGQDLRSPPNTKESGPRCIALVGPFQSGKTTLLEAILARTGAVPRAGSVDAGTSYGDSSPEARQHKMGLGLTAATTQFMG ETYTFLDCPGSVEFAHDMRAALPAVDAAVVVCEADERKLPQLQIILRELEDLGIPRFLFLNKIDRATKRIREVLDSLQPA SRIPLVLRQIPIWNGDLIAGYVDLALERAFVYREHKPSEVIALEGGDLDREKEARFSMLEKLADHDDALMEQLLEDIPPP RDTVFDDLARELREGVICPVLLGSALRENGVMRLLKALRHEAPDVEETASRLGVAASKDAVGYVLKTTHLQHGGKLSLAR VFAGTLADGDTVHAPSGEAARVSGIHTANGGADSKRSSAVAGEVVALGKLDAIKTGDTFGNGKTAPSALVEIAPAPPVLA MALAAADRKDDVKLGQSLQRLSEEDPSLTVIHDPQTHDIVLWGQGEMHLRVALERLKERYGVSVKSHPPTIGYRETIRKS ATQRGRHKKQSGGHGQFGDVVLEVKPLPRGEGFVFAETVVGGAVPRNYIGAVEEGAVDGLRAGPLGFPVVDVHVTLTDGS YHSVDSSDQAFRTAARIGITEALPQCQPVLLEPIHNVEIVCPNDATAKVNAILSGRRGQILGFDTREGWPGWDVVRATLP EAEIGDLIVELRSATAGAGSFTRSFDHMAEVNGRTADQIVAARRQVAA >Mature_687_residues GQDLRSPPNTKESGPRCIALVGPFQSGKTTLLEAILARTGAVPRAGSVDAGTSYGDSSPEARQHKMGLGLTAATTQFMGE TYTFLDCPGSVEFAHDMRAALPAVDAAVVVCEADERKLPQLQIILRELEDLGIPRFLFLNKIDRATKRIREVLDSLQPAS RIPLVLRQIPIWNGDLIAGYVDLALERAFVYREHKPSEVIALEGGDLDREKEARFSMLEKLADHDDALMEQLLEDIPPPR DTVFDDLARELREGVICPVLLGSALRENGVMRLLKALRHEAPDVEETASRLGVAASKDAVGYVLKTTHLQHGGKLSLARV FAGTLADGDTVHAPSGEAARVSGIHTANGGADSKRSSAVAGEVVALGKLDAIKTGDTFGNGKTAPSALVEIAPAPPVLAM ALAAADRKDDVKLGQSLQRLSEEDPSLTVIHDPQTHDIVLWGQGEMHLRVALERLKERYGVSVKSHPPTIGYRETIRKSA TQRGRHKKQSGGHGQFGDVVLEVKPLPRGEGFVFAETVVGGAVPRNYIGAVEEGAVDGLRAGPLGFPVVDVHVTLTDGSY HSVDSSDQAFRTAARIGITEALPQCQPVLLEPIHNVEIVCPNDATAKVNAILSGRRGQILGFDTREGWPGWDVVRATLPE AEIGDLIVELRSATAGAGSFTRSFDHMAEVNGRTADQIVAARRQVAA
Specific function: This Protein Promotes The GTP-Dependent Translocation Of The Nascent Protein Chain From The A-Site To The P-Site Of The Ribosome. [C]
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=687, Percent_Identity=28.3842794759825, Blast_Score=253, Evalue=4e-67, Organism=Homo sapiens, GI19923640, Length=740, Percent_Identity=26.3513513513513, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI25306287, Length=718, Percent_Identity=26.1838440111421, Blast_Score=171, Evalue=2e-42, Organism=Homo sapiens, GI25306283, Length=407, Percent_Identity=27.027027027027, Blast_Score=115, Evalue=2e-25, Organism=Escherichia coli, GI1789738, Length=708, Percent_Identity=31.3559322033898, Blast_Score=283, Evalue=2e-77, Organism=Escherichia coli, GI1790835, Length=473, Percent_Identity=25.369978858351, Blast_Score=100, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17533571, Length=704, Percent_Identity=28.125, Blast_Score=255, Evalue=4e-68, Organism=Caenorhabditis elegans, GI17556745, Length=704, Percent_Identity=22.8693181818182, Blast_Score=127, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6323098, Length=682, Percent_Identity=29.1788856304985, Blast_Score=268, Evalue=3e-72, Organism=Saccharomyces cerevisiae, GI6322359, Length=686, Percent_Identity=23.6151603498542, Blast_Score=146, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6324707, Length=473, Percent_Identity=24.5243128964059, Blast_Score=97, Evalue=9e-21, Organism=Saccharomyces cerevisiae, GI6320593, Length=473, Percent_Identity=24.5243128964059, Blast_Score=97, Evalue=9e-21, Organism=Drosophila melanogaster, GI24582462, Length=692, Percent_Identity=29.3352601156069, Blast_Score=256, Evalue=4e-68, Organism=Drosophila melanogaster, GI221458488, Length=725, Percent_Identity=24.8275862068966, Blast_Score=157, Evalue=2e-38,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 73780; Mature: 73648
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQDLRSPPNTKESGPRCIALVGPFQSGKTTLLEAILARTGAVPRAGSVDAGTSYGDSSP CCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC EARQHKMGLGLTAATTQFMGETYTFLDCPGSVEFAHDMRAALPAVDAAVVVCEADERKLP HHHHHHHCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCH QLQIILRELEDLGIPRFLFLNKIDRATKRIREVLDSLQPASRIPLVLRQIPIWNGDLIAG HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHCCCCCCCHHHH YVDLALERAFVYREHKPSEVIALEGGDLDREKEARFSMLEKLADHDDALMEQLLEDIPPP HHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC RDTVFDDLARELREGVICPVLLGSALRENGVMRLLKALRHEAPDVEETASRLGVAASKDA CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCH VGYVLKTTHLQHGGKLSLARVFAGTLADGDTVHAPSGEAARVSGIHTANGGADSKRSSAV HEEEEEEHHHCCCCCCHHHHHHHHHCCCCCEEECCCCCCEEEECEEECCCCCCCCHHHHH AGEVVALGKLDAIKTGDTFGNGKTAPSALVEIAPAPPVLAMALAAADRKDDVKLGQSLQR HHHEEEECCCCCEECCCCCCCCCCCCHHHEEECCCCHHHHHHHHHCCCCCHHHHHHHHHH LSEEDPSLTVIHDPQTHDIVLWGQGEMHLRVALERLKERYGVSVKSHPPTIGYRETIRKS HHCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH ATQRGRHKKQSGGHGQFGDVVLEVKPLPRGEGFVFAETVVGGAVPRNYIGAVEEGAVDGL HHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCEEEEHHHHCCCCCHHHHCCHHHCCCCCC RAGPLGFPVVDVHVTLTDGSYHSVDSSDQAFRTAARIGITEALPQCQPVLLEPIHNVEIV CCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEE CPNDATAKVNAILSGRRGQILGFDTREGWPGWDVVRATLPEAEIGDLIVELRSATAGAGS ECCCCCCEEHHEECCCCCCEEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCH FTRSFDHMAEVNGRTADQIVAARRQVAA HHHHHHHHHHCCCCCHHHHHHHHHHHCC >Mature Secondary Structure GQDLRSPPNTKESGPRCIALVGPFQSGKTTLLEAILARTGAVPRAGSVDAGTSYGDSSP CCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC EARQHKMGLGLTAATTQFMGETYTFLDCPGSVEFAHDMRAALPAVDAAVVVCEADERKLP HHHHHHHCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCH QLQIILRELEDLGIPRFLFLNKIDRATKRIREVLDSLQPASRIPLVLRQIPIWNGDLIAG HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHCCCCCCCHHHH YVDLALERAFVYREHKPSEVIALEGGDLDREKEARFSMLEKLADHDDALMEQLLEDIPPP HHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC RDTVFDDLARELREGVICPVLLGSALRENGVMRLLKALRHEAPDVEETASRLGVAASKDA CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCH VGYVLKTTHLQHGGKLSLARVFAGTLADGDTVHAPSGEAARVSGIHTANGGADSKRSSAV HEEEEEEHHHCCCCCCHHHHHHHHHCCCCCEEECCCCCCEEEECEEECCCCCCCCHHHHH AGEVVALGKLDAIKTGDTFGNGKTAPSALVEIAPAPPVLAMALAAADRKDDVKLGQSLQR HHHEEEECCCCCEECCCCCCCCCCCCHHHEEECCCCHHHHHHHHHCCCCCHHHHHHHHHH LSEEDPSLTVIHDPQTHDIVLWGQGEMHLRVALERLKERYGVSVKSHPPTIGYRETIRKS HHCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH ATQRGRHKKQSGGHGQFGDVVLEVKPLPRGEGFVFAETVVGGAVPRNYIGAVEEGAVDGL HHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCEEEEHHHHCCCCCHHHHCCHHHCCCCCC RAGPLGFPVVDVHVTLTDGSYHSVDSSDQAFRTAARIGITEALPQCQPVLLEPIHNVEIV CCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEE CPNDATAKVNAILSGRRGQILGFDTREGWPGWDVVRATLPEAEIGDLIVELRSATAGAGS ECCCCCCEEHHEECCCCCCEEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCH FTRSFDHMAEVNGRTADQIVAARRQVAA HHHHHHHHHHCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]