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The map label for this gene is 86748423

Identifier: 86748423

GI number: 86748423

Start: 1480514

End: 1481038

Strand: Direct

Name: 86748423

Synonym: RPB_1298

Alternate gene names: NA

Gene position: 1480514-1481038 (Clockwise)

Preceding gene: 86748422

Following gene: 86748424

Centisome position: 27.77

GC content: 69.71

Gene sequence:

>525_bases
ATGTCCATCACCAGACTGTTCGGTGTCACGGCTGTCGCGCTGGTCGCGTCGTTCGCGAGCGCGAGTGCGCAAGAGCGACT
GCAGGTCGGCGTGCTCGAATGCGCCGGTGGCCCGAACGTCGGCTACGTCGTCGGCTCCACCACCGAACTCGAATGCGTGT
TCAACACCGCCGGCCGCCGGCCGGAGCCGTATGTCGCGCGCCTGCAGCGCATCGGGCTCGATCTCGGCTTCACCCAGAAC
ACGGGCATCGCCTGGGCGGTCTATGCGCCGACCCGTCGGCTCGGCCGCGGCGACCTGTCCGGCAGCTATGGCGGCGTCGG
GGCCAACGCGTCGTTCGGCGTCGGCGTCGGCGGCAATCTGCTGGTCGGCGGTTCGTCGAACGCCTACGCGTTGCAGCCGC
TCAGCCTGCAGGGCCAGACCGGCCTGAACGCCACCGCCGGCATCGTCGACGTGCAGCTCCGCCCGGCCGATCTGCCGCAG
CGCAAGTACCGCAAGCACAAGCGCAAGCATCGCCATCACCGCTGA

Upstream 100 bases:

>100_bases
TTAGATTTATTCCGGCATCGTGGAAGCGCCTTGTTTTGGACAAGACGCTTCCTTCTTGTCGCCTCCGCAATCCAAATCCT
GAAATGCGGAGTTTCTTTCA

Downstream 100 bases:

>100_bases
TCGCGCCGACGCGCCATCGCTTCGACGGAAGGGCCCGCATTGCGGGCCCTTTTTTTTGGCGACGAGCGTCCGGTTCGACG
ACGCGTGTCGCGATCGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MSITRLFGVTAVALVASFASASAQERLQVGVLECAGGPNVGYVVGSTTELECVFNTAGRRPEPYVARLQRIGLDLGFTQN
TGIAWAVYAPTRRLGRGDLSGSYGGVGANASFGVGVGGNLLVGGSSNAYALQPLSLQGQTGLNATAGIVDVQLRPADLPQ
RKYRKHKRKHRHHR

Sequences:

>Translated_174_residues
MSITRLFGVTAVALVASFASASAQERLQVGVLECAGGPNVGYVVGSTTELECVFNTAGRRPEPYVARLQRIGLDLGFTQN
TGIAWAVYAPTRRLGRGDLSGSYGGVGANASFGVGVGGNLLVGGSSNAYALQPLSLQGQTGLNATAGIVDVQLRPADLPQ
RKYRKHKRKHRHHR
>Mature_173_residues
SITRLFGVTAVALVASFASASAQERLQVGVLECAGGPNVGYVVGSTTELECVFNTAGRRPEPYVARLQRIGLDLGFTQNT
GIAWAVYAPTRRLGRGDLSGSYGGVGANASFGVGVGGNLLVGGSSNAYALQPLSLQGQTGLNATAGIVDVQLRPADLPQR
KYRKHKRKHRHHR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18319; Mature: 18188

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSITRLFGVTAVALVASFASASAQERLQVGVLECAGGPNVGYVVGSTTELECVFNTAGRR
CCCHHHHHHHHHHHHHHHHHHCHHHHHEEEEEEECCCCCEEEEEECCEEEEEEEECCCCC
PEPYVARLQRIGLDLGFTQNTGIAWAVYAPTRRLGRGDLSGSYGGVGANASFGVGVGGNL
CCHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCE
LVGGSSNAYALQPLSLQGQTGLNATAGIVDVQLRPADLPQRKYRKHKRKHRHHR
EEECCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SITRLFGVTAVALVASFASASAQERLQVGVLECAGGPNVGYVVGSTTELECVFNTAGRR
CCHHHHHHHHHHHHHHHHHHCHHHHHEEEEEEECCCCCEEEEEECCEEEEEEEECCCCC
PEPYVARLQRIGLDLGFTQNTGIAWAVYAPTRRLGRGDLSGSYGGVGANASFGVGVGGNL
CCHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCE
LVGGSSNAYALQPLSLQGQTGLNATAGIVDVQLRPADLPQRKYRKHKRKHRHHR
EEECCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA