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The map label for this gene is glcD [H]

Identifier: 86748395

GI number: 86748395

Start: 1455791

End: 1457389

Strand: Direct

Name: glcD [H]

Synonym: RPB_1270

Alternate gene names: 86748395

Gene position: 1455791-1457389 (Clockwise)

Preceding gene: 86748394

Following gene: 86748396

Centisome position: 27.3

GC content: 68.36

Gene sequence:

>1599_bases
ATGGGCAGCGCGCGGCTGAAGCATTACGGCTGGGGACGGGAAGGCGAGGGCATGAGCGGGGCCGAGCAGGCCTTCGTGCT
CGGCCGCTACCGGCAGAAATTCGGTCGCGACAGCTTCGACACCATCGCGGTGCCGAAGCTCGACGATCTGAAGCTGCGCG
AGCCGCGAATCGTGCCGCCGCGCGCGCTGGCGGAGATCTGTTCGATCGACGTCTACAATCGCGCCGCCCACGCCTATGGC
AAATCCTATCCCGACTACGTCCGCGGCATGATCGGCGATTATGACGCCGCGCCCGATATCGTCGCCTATCCGCGCAATGA
AGCGGAGATCGCCGCGGTGATGGACTGGGCCGGCGGTGCCGGCGCGGCGCTGACGCCGTTCGGCGGCGGTTCGTCGGTGT
GCGGCGGCGTCGAGTGTCGCGTCGACGGCAGTCGTTACAAGGCCGCGGTGGCGCTCGACATGCGCCATCTCGGTCGGGTG
GTCGAGGTCGACAAGACCTCGCGCGCCGCGCTGATCGAAGGCGGCGCCTATGGTCCGGCGCTGGAGGCGCAGCTCAAGCC
GCACGGCATGACGCTGCGGCATTTTCCGCAGAGCTTCGAATATTCCACGCTCGGCGGCTGGATCGCGACCCGCTCCGGCG
GTCACTTCGCCAGCCTCTATACCCACATCGACGATTTCGTCGAAAGCATCCGCGTGGTGACGCCGCGCGGCGTCGTGGAA
ACGCGACGGTTGCCGGGATCGGGGGCGGGGCCGAGCCCGGACCGGATGTTCATCGGCTCCGAGGGCATTCTCGGCGTGAT
CTCGCAGGCCTGGATGCGGCTGCAGGCGCGGCCGACGTTCCGTGCCGGCGCATCGGTGCGCTTTGCGGATTTCTTCGCCG
CGGCCCGCGCCGTGCGCGCGGTGGCGCAGGCCGGCCTGTATCCGTCGAACTGCCGCATCCTCGATCCGCAGGAAGCGTTC
AACACCGGCGCCGCCGACGGCAGCGTCGCGATCATGGTGCTCGGCTTCGAATCCGGTGACCATCCGGTCGAGGCGTGGAT
GGCGCGCGCGCTCGAATGCTGCGCCGACCATGGCGGCACGCCGGAGAAGGCCGATGCCGCCGCGGCGCATCTCGAGGGCG
CCGCCGGCCTGTGGCGCAACGCTTTCATCCGCATGCCCTATGCGCGCGAATTTCTCACGCCGGCGGCGCTGATCAACGAC
ACCTTCGAGACCGCGATCACCTGGGATCGCTTCGAATCGTTCCACGACAGCGTGAAGGCCGCGACCGAACGCGCGATCCT
CGAGGCGACTGGTATCAAGGGTGAAGTCACCTGCCGTTTCACCCACGTCTACCCGGACGGGCCGGCGCCGTATTTCTCGT
TTCATGCGCTCGGCCGCCACGGCGCGCTGCTCGAACAATGGCAGGCGATCAAGGACGCCGCGAGCGACGCGCTGATCGAC
GCCGGCGGCACCATCACGCATCACCACGCGGTCGGCCGGGATCACCGGAAGTGGTACGACCGCCAGCGCCCCGAATTGTT
CGCCGCCGCGCTACGCGCCGCCAAGCGCGAACTCGATCCGCAGGCGATGCTCAATCCGGGCGTGTTGATCGATCCGTAG

Upstream 100 bases:

>100_bases
GCAGCACGCAAACGCGCTTGCGGGTGTCGCCGTCCCGTTTCAGACTGAGCGTTGCAATCGGCGCGCCGTCAATCGTCGCC
GAACCGAACGGGAGGTCATG

Downstream 100 bases:

>100_bases
AGCGGTTCTGCTTTTGATGGAATCGAAGCTCCCGATCCGGCTGCCGCCGTCATCCTGAGGTGCCCATTGGGCCGCGCTGT
GCGCGGCCCAACGGGCCTCG

Product: FAD linked oxidase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 532; Mature: 531

Protein sequence:

>532_residues
MGSARLKHYGWGREGEGMSGAEQAFVLGRYRQKFGRDSFDTIAVPKLDDLKLREPRIVPPRALAEICSIDVYNRAAHAYG
KSYPDYVRGMIGDYDAAPDIVAYPRNEAEIAAVMDWAGGAGAALTPFGGGSSVCGGVECRVDGSRYKAAVALDMRHLGRV
VEVDKTSRAALIEGGAYGPALEAQLKPHGMTLRHFPQSFEYSTLGGWIATRSGGHFASLYTHIDDFVESIRVVTPRGVVE
TRRLPGSGAGPSPDRMFIGSEGILGVISQAWMRLQARPTFRAGASVRFADFFAAARAVRAVAQAGLYPSNCRILDPQEAF
NTGAADGSVAIMVLGFESGDHPVEAWMARALECCADHGGTPEKADAAAAHLEGAAGLWRNAFIRMPYAREFLTPAALIND
TFETAITWDRFESFHDSVKAATERAILEATGIKGEVTCRFTHVYPDGPAPYFSFHALGRHGALLEQWQAIKDAASDALID
AGGTITHHHAVGRDHRKWYDRQRPELFAAALRAAKRELDPQAMLNPGVLIDP

Sequences:

>Translated_532_residues
MGSARLKHYGWGREGEGMSGAEQAFVLGRYRQKFGRDSFDTIAVPKLDDLKLREPRIVPPRALAEICSIDVYNRAAHAYG
KSYPDYVRGMIGDYDAAPDIVAYPRNEAEIAAVMDWAGGAGAALTPFGGGSSVCGGVECRVDGSRYKAAVALDMRHLGRV
VEVDKTSRAALIEGGAYGPALEAQLKPHGMTLRHFPQSFEYSTLGGWIATRSGGHFASLYTHIDDFVESIRVVTPRGVVE
TRRLPGSGAGPSPDRMFIGSEGILGVISQAWMRLQARPTFRAGASVRFADFFAAARAVRAVAQAGLYPSNCRILDPQEAF
NTGAADGSVAIMVLGFESGDHPVEAWMARALECCADHGGTPEKADAAAAHLEGAAGLWRNAFIRMPYAREFLTPAALIND
TFETAITWDRFESFHDSVKAATERAILEATGIKGEVTCRFTHVYPDGPAPYFSFHALGRHGALLEQWQAIKDAASDALID
AGGTITHHHAVGRDHRKWYDRQRPELFAAALRAAKRELDPQAMLNPGVLIDP
>Mature_531_residues
GSARLKHYGWGREGEGMSGAEQAFVLGRYRQKFGRDSFDTIAVPKLDDLKLREPRIVPPRALAEICSIDVYNRAAHAYGK
SYPDYVRGMIGDYDAAPDIVAYPRNEAEIAAVMDWAGGAGAALTPFGGGSSVCGGVECRVDGSRYKAAVALDMRHLGRVV
EVDKTSRAALIEGGAYGPALEAQLKPHGMTLRHFPQSFEYSTLGGWIATRSGGHFASLYTHIDDFVESIRVVTPRGVVET
RRLPGSGAGPSPDRMFIGSEGILGVISQAWMRLQARPTFRAGASVRFADFFAAARAVRAVAQAGLYPSNCRILDPQEAFN
TGAADGSVAIMVLGFESGDHPVEAWMARALECCADHGGTPEKADAAAAHLEGAAGLWRNAFIRMPYAREFLTPAALINDT
FETAITWDRFESFHDSVKAATERAILEATGIKGEVTCRFTHVYPDGPAPYFSFHALGRHGALLEQWQAIKDAASDALIDA
GGTITHHHAVGRDHRKWYDRQRPELFAAALRAAKRELDPQAMLNPGVLIDP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI4501993, Length=487, Percent_Identity=27.9260780287474, Blast_Score=198, Evalue=8e-51,
Organism=Homo sapiens, GI37595756, Length=447, Percent_Identity=24.3847874720358, Blast_Score=95, Evalue=1e-19,
Organism=Escherichia coli, GI48994907, Length=442, Percent_Identity=23.3031674208145, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI1787977, Length=157, Percent_Identity=28.0254777070064, Blast_Score=62, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17556096, Length=487, Percent_Identity=29.1581108829569, Blast_Score=207, Evalue=1e-53,
Organism=Saccharomyces cerevisiae, GI6320027, Length=454, Percent_Identity=22.4669603524229, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24653753, Length=486, Percent_Identity=28.6008230452675, Blast_Score=211, Evalue=1e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 57616; Mature: 57484

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSARLKHYGWGREGEGMSGAEQAFVLGRYRQKFGRDSFDTIAVPKLDDLKLREPRIVPP
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCH
RALAEICSIDVYNRAAHAYGKSYPDYVRGMIGDYDAAPDIVAYPRNEAEIAAVMDWAGGA
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEECCCCCCCEEEEEECCCCC
GAALTPFGGGSSVCGGVECRVDGSRYKAAVALDMRHLGRVVEVDKTSRAALIEGGAYGPA
CCEECCCCCCCCCCCCEEEEECCCCEEEEEEEEHHHCCCEEEECCCCCEEEEECCCCCCC
LEAQLKPHGMTLRHFPQSFEYSTLGGWIATRSGGHFASLYTHIDDFVESIRVVTPRGVVE
CCCEECCCCCCHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHEECCCCCCHH
TRRLPGSGAGPSPDRMFIGSEGILGVISQAWMRLQARPTFRAGASVRFADFFAAARAVRA
HCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
VAQAGLYPSNCRILDPQEAFNTGAADGSVAIMVLGFESGDHPVEAWMARALECCADHGGT
HHHHCCCCCCCEEECHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCC
PEKADAAAAHLEGAAGLWRNAFIRMPYAREFLTPAALINDTFETAITWDRFESFHDSVKA
CCHHHHHHHHHHHHHHHHHHHHEECCHHHHHHCHHHHHHHHHHHHEEHHHHHHHHHHHHH
ATERAILEATGIKGEVTCRFTHVYPDGPAPYFSFHALGRHGALLEQWQAIKDAASDALID
HHHHHHHHHCCCCCEEEEEEEEECCCCCCCCEEHHHHCCCCHHHHHHHHHHHHHHHHEEC
AGGTITHHHAVGRDHRKWYDRQRPELFAAALRAAKRELDPQAMLNPGVLIDP
CCCCEEECHHCCCHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHCCCCCEECC
>Mature Secondary Structure 
GSARLKHYGWGREGEGMSGAEQAFVLGRYRQKFGRDSFDTIAVPKLDDLKLREPRIVPP
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCH
RALAEICSIDVYNRAAHAYGKSYPDYVRGMIGDYDAAPDIVAYPRNEAEIAAVMDWAGGA
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEECCCCCCCEEEEEECCCCC
GAALTPFGGGSSVCGGVECRVDGSRYKAAVALDMRHLGRVVEVDKTSRAALIEGGAYGPA
CCEECCCCCCCCCCCCEEEEECCCCEEEEEEEEHHHCCCEEEECCCCCEEEEECCCCCCC
LEAQLKPHGMTLRHFPQSFEYSTLGGWIATRSGGHFASLYTHIDDFVESIRVVTPRGVVE
CCCEECCCCCCHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHEECCCCCCHH
TRRLPGSGAGPSPDRMFIGSEGILGVISQAWMRLQARPTFRAGASVRFADFFAAARAVRA
HCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
VAQAGLYPSNCRILDPQEAFNTGAADGSVAIMVLGFESGDHPVEAWMARALECCADHGGT
HHHHCCCCCCCEEECHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCC
PEKADAAAAHLEGAAGLWRNAFIRMPYAREFLTPAALINDTFETAITWDRFESFHDSVKA
CCHHHHHHHHHHHHHHHHHHHHEECCHHHHHHCHHHHHHHHHHHHEEHHHHHHHHHHHHH
ATERAILEATGIKGEVTCRFTHVYPDGPAPYFSFHALGRHGALLEQWQAIKDAASDALID
HHHHHHHHHCCCCCEEEEEEEEECCCCCCCCEEHHHHCCCCHHHHHHHHHHHHHHHHEEC
AGGTITHHHAVGRDHRKWYDRQRPELFAAALRAAKRELDPQAMLNPGVLIDP
CCCCEEECHHCCCHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]