| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is estA [H]
Identifier: 86748391
GI number: 86748391
Start: 1449066
End: 1451120
Strand: Direct
Name: estA [H]
Synonym: RPB_1266
Alternate gene names: 86748391
Gene position: 1449066-1451120 (Clockwise)
Preceding gene: 86748390
Following gene: 86748392
Centisome position: 27.18
GC content: 67.69
Gene sequence:
>2055_bases ATGTCCAGTATCTCAAGGGGTCATGCGCGGAATTGCGCGCCGATATTCGTTTCCCGCATTCGCACTGGACTCCTGACGAG CGCTGTCGTGACGACGGTCTTGGGCGCATCGCTGGCGCCCGCACAGGCGCAGTTCGCGAGGCTGTATGGCTTCGGCGACA GCTATGCCGATACCGGCGCCGCACCCGGCGGCGCGTACCGGCTGATCGGCGCGAACGGGACCGGCACGGTCACGATCCCA TACTTTCCGTTCACGCTGACCCCATCCGACTTCTGGCCTTGTCCAAGCCCGACCTATACGAGCTGCCGCTTCACCGGCAG CACCAATTTCGTCGATTCGCTGCAATCGATCTATGGGCTGTCGGGCCTGACGAACTACTCGATCGGCGGCGCGCGCACCG GCAACACCAACACCATGCCGTTTCTGTCGAGCGGCTACGGGCTGCCGTATGAATTGCAGCAATTCGCCGCCAGCGGGACG CGCTTCACCGAACGCGACCTGATCGCGCTGTCGATCGGTGGCAACGATCTGTCCGGCATCAATGTCGGCACCGGCGATGT CGCCTCGCAGAATGCGATCATCGTCGCGGGCGCGCTGCAGTCGGCCGCCGCCGCGGTGGGCGGCGTGCAGCAATTGGTGG CGGCCGGCGCGCGCAACATCGCCTGGCTCGGCACCGGTAGCTCGAAGTGGTTTCCGGAGGCGACGCTCGGCTCGCAGGGA GGGGCCATCGGGACCTTCAACTTCAGCGCGTCGCAGCGCGACGCCTGGGCCGACACCTATTACCAGCAGACGCAGCTGAT GCTGGCGCCGATGGCGCAGGCCGGCGTGCGCATCTTCCTGTTCAATTTCGGCATCCTGCAGCAGCGCGTCGCCGAGAACC CGGCGATGTACGGCTTCGCCGGCGTGCCGGCGGGCTTCACCGGCTGCGAGGCCGGACCGGGCACCGGCGCGACGCCGGGG ACGGTCGCGGTGAATGTCGCCGGCTGTTTCTATGAAAACTCGGTGCATCCGACCGGCGCGGCGATGGCGCTGATCGCCAA CTACATGGCCAACCAGATCGACGCGCCGACCACGGTGACGCCGCAGGCCGCCATCGCGACCGGCCTGCTCGGCAGTTTCT CGAATTCGGTGTTCGATCGCCTCGAGGCCGGCCGGCGCTTCCAGCCGTCCGGTGTCAATGCCGCAATGGCGGCGATGCCG AGCAAGGCCGTTGCGCTGACCGAGCCGGCGGACCGTTGGTCGGTCTATGGTGCGGCGAGCTATGCGGGCGGCAGCCGTGA CCGGCAGTTCTACGCCACCGGCTATGACTACGATGCGGCGGGCGGCTATCTCGGGCTGGAATATCGGCTCAATGCCAATT GGCGCGTCGGCGGCGTGTTCGGCTATTCGCAGCCCGACGTGAAGCTCGCGGTGCAGGATGCGCGCAACCGCATCGATGCG TTTCAGTTCGCCGGCTACAGCTCCTACACCGATGCGCACTGGTTCGCCGACGGCCTGGTCGCCTATGGCCGCCAGGACTT CACGCTGGAGCGTCGCGGCATCATCGACATCATCCGCGCCAGCACCAGCGCCGACGTGGTCACGGTCGCCGCGCGTGGGG GCTATCTGTTCGATGCCGGCCGGCTCCGCGTCGGGCCGATCGCCGGGCTGAACTACACCAACGCCACGATCCGGGGCTAC ACCGAAACCGGCGACGTGCTGCTCACCATGATGGTGGATCGCCAGACCCTCGACACCCTCACCGGCGATGCCGGCGTGCA GCTCCGCTATCCGCTGCAATTCGGCAACGGCCTCTACGCGCCGTTCCTGAACCTCACCGCCGCGCACGACTTCCTGCGCT CCGGCCACACTGTCACCACCACGCTGGTGTCGGCGCCGCTGCTGCCGATCCTGACGCCGGTGTCCGCCGATGGCGGCACC TATGGCCGGGTTGCGGCCGGCGTCTCGGCCCTGGTCGCCACCAACGTCACCGCGACGCTGACCGGCACCACCAGCTTCGC CCGCAAGGGCGGCGACGACGCCGGCGTCACCGGCGGCGTCAAGCTCGCGTTCTGA
Upstream 100 bases:
>100_bases AGCCGCGCGACTAATGACTGGTGTGTTCAGTATTTCTATCAGTTGCTGCTGCCCCTCGATCACCTCACCGATAGTCATTG GCGGGAAGGGGTGATTCGTG
Downstream 100 bases:
>100_bases TGGTGCGAAACGCGTCGTAGCGGCCAACGCGGAATCGCTCGGCGCGATCGACGATCGCGGGTTTCGAGCGGTTCCAAGGT CTGCTGCTGCCGTGTTCGGG
Product: Outer membrane autotransporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 684; Mature: 683
Protein sequence:
>684_residues MSSISRGHARNCAPIFVSRIRTGLLTSAVVTTVLGASLAPAQAQFARLYGFGDSYADTGAAPGGAYRLIGANGTGTVTIP YFPFTLTPSDFWPCPSPTYTSCRFTGSTNFVDSLQSIYGLSGLTNYSIGGARTGNTNTMPFLSSGYGLPYELQQFAASGT RFTERDLIALSIGGNDLSGINVGTGDVASQNAIIVAGALQSAAAAVGGVQQLVAAGARNIAWLGTGSSKWFPEATLGSQG GAIGTFNFSASQRDAWADTYYQQTQLMLAPMAQAGVRIFLFNFGILQQRVAENPAMYGFAGVPAGFTGCEAGPGTGATPG TVAVNVAGCFYENSVHPTGAAMALIANYMANQIDAPTTVTPQAAIATGLLGSFSNSVFDRLEAGRRFQPSGVNAAMAAMP SKAVALTEPADRWSVYGAASYAGGSRDRQFYATGYDYDAAGGYLGLEYRLNANWRVGGVFGYSQPDVKLAVQDARNRIDA FQFAGYSSYTDAHWFADGLVAYGRQDFTLERRGIIDIIRASTSADVVTVAARGGYLFDAGRLRVGPIAGLNYTNATIRGY TETGDVLLTMMVDRQTLDTLTGDAGVQLRYPLQFGNGLYAPFLNLTAAHDFLRSGHTVTTTLVSAPLLPILTPVSADGGT YGRVAAGVSALVATNVTATLTGTTSFARKGGDDAGVTGGVKLAF
Sequences:
>Translated_684_residues MSSISRGHARNCAPIFVSRIRTGLLTSAVVTTVLGASLAPAQAQFARLYGFGDSYADTGAAPGGAYRLIGANGTGTVTIP YFPFTLTPSDFWPCPSPTYTSCRFTGSTNFVDSLQSIYGLSGLTNYSIGGARTGNTNTMPFLSSGYGLPYELQQFAASGT RFTERDLIALSIGGNDLSGINVGTGDVASQNAIIVAGALQSAAAAVGGVQQLVAAGARNIAWLGTGSSKWFPEATLGSQG GAIGTFNFSASQRDAWADTYYQQTQLMLAPMAQAGVRIFLFNFGILQQRVAENPAMYGFAGVPAGFTGCEAGPGTGATPG TVAVNVAGCFYENSVHPTGAAMALIANYMANQIDAPTTVTPQAAIATGLLGSFSNSVFDRLEAGRRFQPSGVNAAMAAMP SKAVALTEPADRWSVYGAASYAGGSRDRQFYATGYDYDAAGGYLGLEYRLNANWRVGGVFGYSQPDVKLAVQDARNRIDA FQFAGYSSYTDAHWFADGLVAYGRQDFTLERRGIIDIIRASTSADVVTVAARGGYLFDAGRLRVGPIAGLNYTNATIRGY TETGDVLLTMMVDRQTLDTLTGDAGVQLRYPLQFGNGLYAPFLNLTAAHDFLRSGHTVTTTLVSAPLLPILTPVSADGGT YGRVAAGVSALVATNVTATLTGTTSFARKGGDDAGVTGGVKLAF >Mature_683_residues SSISRGHARNCAPIFVSRIRTGLLTSAVVTTVLGASLAPAQAQFARLYGFGDSYADTGAAPGGAYRLIGANGTGTVTIPY FPFTLTPSDFWPCPSPTYTSCRFTGSTNFVDSLQSIYGLSGLTNYSIGGARTGNTNTMPFLSSGYGLPYELQQFAASGTR FTERDLIALSIGGNDLSGINVGTGDVASQNAIIVAGALQSAAAAVGGVQQLVAAGARNIAWLGTGSSKWFPEATLGSQGG AIGTFNFSASQRDAWADTYYQQTQLMLAPMAQAGVRIFLFNFGILQQRVAENPAMYGFAGVPAGFTGCEAGPGTGATPGT VAVNVAGCFYENSVHPTGAAMALIANYMANQIDAPTTVTPQAAIATGLLGSFSNSVFDRLEAGRRFQPSGVNAAMAAMPS KAVALTEPADRWSVYGAASYAGGSRDRQFYATGYDYDAAGGYLGLEYRLNANWRVGGVFGYSQPDVKLAVQDARNRIDAF QFAGYSSYTDAHWFADGLVAYGRQDFTLERRGIIDIIRASTSADVVTVAARGGYLFDAGRLRVGPIAGLNYTNATIRGYT ETGDVLLTMMVDRQTLDTLTGDAGVQLRYPLQFGNGLYAPFLNLTAAHDFLRSGHTVTTTLVSAPLLPILTPVSADGGTY GRVAAGVSALVATNVTATLTGTTSFARKGGDDAGVTGGVKLAF
Specific function: Unknown
COG id: COG4625
COG function: function code S; Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005546 - InterPro: IPR013830 - InterPro: IPR013831 - InterPro: IPR017186 - InterPro: IPR001087 - InterPro: IPR008265 - InterPro: IPR006315 [H]
Pfam domain/function: PF03797 Autotransporter; PF00657 Lipase_GDSL [H]
EC number: =3.1.1.1 [H]
Molecular weight: Translated: 71255; Mature: 71123
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSISRGHARNCAPIFVSRIRTGLLTSAVVTTVLGASLAPAQAQFARLYGFGDSYADTGA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCC APGGAYRLIGANGTGTVTIPYFPFTLTPSDFWPCPSPTYTSCRFTGSTNFVDSLQSIYGL CCCCEEEEEECCCCEEEEEEEEEEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCC SGLTNYSIGGARTGNTNTMPFLSSGYGLPYELQQFAASGTRFTERDLIALSIGGNDLSGI CCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHCCCCCEECCCEEEEEECCCCCCCC NVGTGDVASQNAIIVAGALQSAAAAVGGVQQLVAAGARNIAWLGTGSSKWFPEATLGSQG CCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCC GAIGTFNFSASQRDAWADTYYQQTQLMLAPMAQAGVRIFLFNFGILQQRVAENPAMYGFA CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHCCCCCEEEC GVPAGFTGCEAGPGTGATPGTVAVNVAGCFYENSVHPTGAAMALIANYMANQIDAPTTVT CCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCC PQAAIATGLLGSFSNSVFDRLEAGRRFQPSGVNAAMAAMPSKAVALTEPADRWSVYGAAS CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCEEEECCCCHHEEEEEEHC YAGGSRDRQFYATGYDYDAAGGYLGLEYRLNANWRVGGVFGYSQPDVKLAVQDARNRIDA CCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCEEEEEHHHHHHHHH FQFAGYSSYTDAHWFADGLVAYGRQDFTLERRGIIDIIRASTSADVVTVAARGGYLFDAG HHCCCCCCCCCHHHHHHHHHHCCCCCCEECCCCCEEEEECCCCCCEEEEEECCCEEEECC RLRVGPIAGLNYTNATIRGYTETGDVLLTMMVDRQTLDTLTGDAGVQLRYPLQFGNGLYA CEEECCCCCCCCCCCEEEEECCCCCEEEEEEECHHHHHHHCCCCCEEEEEEHCCCCCEEH PFLNLTAAHDFLRSGHTVTTTLVSAPLLPILTPVSADGGTYGRVAAGVSALVATNVTATL HHHHHHHHHHHHHCCCEEEEHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCEEEEE TGTTSFARKGGDDAGVTGGVKLAF ECCHHHHHCCCCCCCCCCCEEEEC >Mature Secondary Structure SSISRGHARNCAPIFVSRIRTGLLTSAVVTTVLGASLAPAQAQFARLYGFGDSYADTGA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCC APGGAYRLIGANGTGTVTIPYFPFTLTPSDFWPCPSPTYTSCRFTGSTNFVDSLQSIYGL CCCCEEEEEECCCCEEEEEEEEEEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCC SGLTNYSIGGARTGNTNTMPFLSSGYGLPYELQQFAASGTRFTERDLIALSIGGNDLSGI CCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHCCCCCEECCCEEEEEECCCCCCCC NVGTGDVASQNAIIVAGALQSAAAAVGGVQQLVAAGARNIAWLGTGSSKWFPEATLGSQG CCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCC GAIGTFNFSASQRDAWADTYYQQTQLMLAPMAQAGVRIFLFNFGILQQRVAENPAMYGFA CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHCCCCCEEEC GVPAGFTGCEAGPGTGATPGTVAVNVAGCFYENSVHPTGAAMALIANYMANQIDAPTTVT CCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCC PQAAIATGLLGSFSNSVFDRLEAGRRFQPSGVNAAMAAMPSKAVALTEPADRWSVYGAAS CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCEEEECCCCHHEEEEEEHC YAGGSRDRQFYATGYDYDAAGGYLGLEYRLNANWRVGGVFGYSQPDVKLAVQDARNRIDA CCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCEEEEEHHHHHHHHH FQFAGYSSYTDAHWFADGLVAYGRQDFTLERRGIIDIIRASTSADVVTVAARGGYLFDAG HHCCCCCCCCCHHHHHHHHHHCCCCCCEECCCCCEEEEECCCCCCEEEEEECCCEEEECC RLRVGPIAGLNYTNATIRGYTETGDVLLTMMVDRQTLDTLTGDAGVQLRYPLQFGNGLYA CEEECCCCCCCCCCCEEEEECCCCCEEEEEEECHHHHHHHCCCCCEEEEEEHCCCCCEEH PFLNLTAAHDFLRSGHTVTTTLVSAPLLPILTPVSADGGTYGRVAAGVSALVATNVTATL HHHHHHHHHHHHHCCCEEEEHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCEEEEE TGTTSFARKGGDDAGVTGGVKLAF ECCHHHHHCCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10559163; 10984043 [H]