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The map label for this gene is korB [H]

Identifier: 86748360

GI number: 86748360

Start: 1413819

End: 1414631

Strand: Direct

Name: korB [H]

Synonym: RPB_1235

Alternate gene names: 86748360

Gene position: 1413819-1414631 (Clockwise)

Preceding gene: 86748359

Following gene: 86748361

Centisome position: 26.52

GC content: 67.16

Gene sequence:

>813_bases
ATGTTCCGCGATGCGCCGCATTTCGACGTCCGCGATTATCTCCGCCAGGAGATGATGCCGCATTTCCTGTGCCCCGGCTG
CGGCCACGGCATGGCGTTGCGCGCGCTGCTCTGGGCGCTGCACGAACTCAAGGTCGACCGCGACAAGCTCGCCGTCGTCT
CGGGCATCGGCTGCGCCGGGCGGCTGTCGGCCTATATCGACGCCAACACCTTCCACACCACCCACGGCCGGCCGCTGGCC
TATGCGACCGGGCTGGCGCTGGCGCGGCCGGACCTGCAAGTCGTGGTGATCACCGGCGACGGCGATTGCCTGGCGATCGG
CGGCAACCATCTGATCCACGCCTGCCGGCGCAATCTCAAGCTCACCTGCCTGATGCTCAACAACGAGATCTACGGCATGA
CCGGCGGCCAGGTGTCGCCGACGACGTCGGAGACAAGGCTGACCACCACGACGCCGCACGGCAACGCCGAGCCGAATTTC
GACGCCTGCGCGCTGGCGACCGCCGCCGGCGCCGGCTTCGTCGGCCGCGAAATGACGCGCCACGTGCCGAAGCTGAAGGA
ACTGATCAAGGACGGGCTGCAGCATCCGGGCTTCGCCTTCATCGAAGTGCTGTCGGATTGCACCGAAGTCTACGGCCGCA
AGAACGACATGGGCTCGTCGTCCGAAATGGTGCTGCGGCAGAAGAGCGAGATGCGCCCAAGCGCCTATCGCGACAGCGTC
GACGAGCCGTTCCGCTCGACGGACCTGCCGACCGGCATTTTGGCTCGCAACACCCGCCCGGAGTACGGCGCAGCGCTGCG
CGCCGCCAAGTAA

Upstream 100 bases:

>100_bases
CGCGATCGCCGCGTCGAGGGCCTGCATTTGATCAGCGGTGAGCCGATTACGCCGGCTGAGATCGCCGCCGCCGCCACCAA
GCTCGCTTCGGAGGTCTGAG

Downstream 100 bases:

>100_bases
CAGGAGCGAGACGATGCCGAAATCCCGGATCGAACTGCGCTTCGGCGGCACCGGCGGGCAGGGGCTGGTGCTCAGCGCCA
AGCTCTTGGCCGATGCGCTG

Product: 2-oxoglutarate ferredoxin oxidoreductase subunit beta

Products: NA

Alternate protein names: 2-ketoglutarate oxidoreductase beta chain; KOR; 2-oxoglutarate-ferredoxin oxidoreductase subunit beta [H]

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MFRDAPHFDVRDYLRQEMMPHFLCPGCGHGMALRALLWALHELKVDRDKLAVVSGIGCAGRLSAYIDANTFHTTHGRPLA
YATGLALARPDLQVVVITGDGDCLAIGGNHLIHACRRNLKLTCLMLNNEIYGMTGGQVSPTTSETRLTTTTPHGNAEPNF
DACALATAAGAGFVGREMTRHVPKLKELIKDGLQHPGFAFIEVLSDCTEVYGRKNDMGSSSEMVLRQKSEMRPSAYRDSV
DEPFRSTDLPTGILARNTRPEYGAALRAAK

Sequences:

>Translated_270_residues
MFRDAPHFDVRDYLRQEMMPHFLCPGCGHGMALRALLWALHELKVDRDKLAVVSGIGCAGRLSAYIDANTFHTTHGRPLA
YATGLALARPDLQVVVITGDGDCLAIGGNHLIHACRRNLKLTCLMLNNEIYGMTGGQVSPTTSETRLTTTTPHGNAEPNF
DACALATAAGAGFVGREMTRHVPKLKELIKDGLQHPGFAFIEVLSDCTEVYGRKNDMGSSSEMVLRQKSEMRPSAYRDSV
DEPFRSTDLPTGILARNTRPEYGAALRAAK
>Mature_270_residues
MFRDAPHFDVRDYLRQEMMPHFLCPGCGHGMALRALLWALHELKVDRDKLAVVSGIGCAGRLSAYIDANTFHTTHGRPLA
YATGLALARPDLQVVVITGDGDCLAIGGNHLIHACRRNLKLTCLMLNNEIYGMTGGQVSPTTSETRLTTTTPHGNAEPNF
DACALATAAGAGFVGREMTRHVPKLKELIKDGLQHPGFAFIEVLSDCTEVYGRKNDMGSSSEMVLRQKSEMRPSAYRDSV
DEPFRSTDLPTGILARNTRPEYGAALRAAK

Specific function: Unknown

COG id: COG1013

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011766 [H]

Pfam domain/function: PF02775 TPP_enzyme_C [H]

EC number: =1.2.7.3 [H]

Molecular weight: Translated: 29469; Mature: 29469

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRDAPHFDVRDYLRQEMMPHFLCPGCGHGMALRALLWALHELKVDRDKLAVVSGIGCAG
CCCCCCCCCHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHH
RLSAYIDANTFHTTHGRPLAYATGLALARPDLQVVVITGDGDCLAIGGNHLIHACRRNLK
HHHEEEECCEEECCCCCCHHHHHHHEEECCCEEEEEEECCCCEEEECCHHHHHHHHCCCE
LTCLMLNNEIYGMTGGQVSPTTSETRLTTTTPHGNAEPNFDACALATAAGAGFVGREMTR
EEEEEECCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHH
HVPKLKELIKDGLQHPGFAFIEVLSDCTEVYGRKNDMGSSSEMVLRQKSEMRPSAYRDSV
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHCCC
DEPFRSTDLPTGILARNTRPEYGAALRAAK
CCCHHHCCCCCCHHCCCCCCCHHHHHCCCC
>Mature Secondary Structure
MFRDAPHFDVRDYLRQEMMPHFLCPGCGHGMALRALLWALHELKVDRDKLAVVSGIGCAG
CCCCCCCCCHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHH
RLSAYIDANTFHTTHGRPLAYATGLALARPDLQVVVITGDGDCLAIGGNHLIHACRRNLK
HHHEEEECCEEECCCCCCHHHHHHHEEECCCEEEEEEECCCCEEEECCHHHHHHHHCCCE
LTCLMLNNEIYGMTGGQVSPTTSETRLTTTTPHGNAEPNFDACALATAAGAGFVGREMTR
EEEEEECCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHH
HVPKLKELIKDGLQHPGFAFIEVLSDCTEVYGRKNDMGSSSEMVLRQKSEMRPSAYRDSV
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHCCC
DEPFRSTDLPTGILARNTRPEYGAALRAAK
CCCHHHCCCCCCHHCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]