| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is cya3 [H]
Identifier: 86747987
GI number: 86747987
Start: 985642
End: 987384
Strand: Direct
Name: cya3 [H]
Synonym: RPB_0861
Alternate gene names: 86747987
Gene position: 985642-987384 (Clockwise)
Preceding gene: 86747985
Following gene: 86747988
Centisome position: 18.49
GC content: 66.95
Gene sequence:
>1743_bases TTGCGCTTTTCGGTCAGATTGCTGGGGCCATTCCAGCTGTCGACGCCGGACGGTCGACGCGTCGAGATTTCCAGCAAGAA GGGGACGGCCGTCATCGCCATGCTGGCGATGTCGCGCGACGGTGAGCACACCCGTGGCTGGCTGCAGGATCGACTGTGGG GCAGTCGCGGCCATGCCGAAGCGGCGGGAAGTCTGCGCCGCGAATTGTCGAATCTGCGAAAGCTTCTGAATGGCGCCGGC ATCGAATTGCTGGTCAGCGATCGTGACCGCGTCCGCCTGCGGCTCGACCGGATCGTCGTCGACGCCCGCGATCCGAGCGC CGATCCGGCCATCGCCGGCGAATTTCTCGAAGGCTTCGATATTCCCGGCGAGGCCAGCTTCCGCGATTGGCTGCGCGAGC AGCGCGCGCGGCTGATGCGCGGACCGCGCCCACCGGCGCCCGCCGCGCCGGTGCCGGGCGGGCTGCCCAGCCACATCCTC GACACCAGCCAGCCGCCCGTCGGCTTCACCGGCAATCAGGCGATCGCGGTGCTGCCGTTCACCAACGTCACCGGCGACGA GACGCTGGACTATCTGGCCGAGGGCATCAGCGAAGAGCTGATCGTCGGCCTGTCGCGGATTCGCTGGCTGCCGGTGATCG CGCGCAGTTCGAGCTTTTCCTTCGCCGACACGATCGACCGCAAGGTGATAGGCCAGCGGCTCGGCGCGCATTATCTGATC GAGGGGCATCTGTATCGCGCCTACGATTCGTTCGGAGTCTCCGCCAGCCTGTCGGAGGCGGCGACCGGCTACGCGATCTG GTCGCGGCGTTTCACGCTGCAATCGCCGGCGCTCCGCGACGAACTCGAGCAGTTCGTCAACGAACTGGTGGCGCAGCTCG AGATCAGGATCGAGCACGCCGAGCAGATCCGCATCCGCAACAAGCGCCAGGACGCGCTCGGCGTCAGCGACCTGATCTGG CGCGGCCGCTGGCACCTCAACCGGCTGACCCGCGCCGATTCCGACATGGCGCAGAAGCTGTTCGCCGACGCGTTGGCGCT CGATCCGGACTCGGCGGAGGCGCTGATCCAGGTCACCTCGGCGCTCGGCTGGTCGATCTGGGCCGGCCGCCAGCCGCAGG AGCAGATCCTGCGGATGCGCAAGCTGGCGAAGCAGGCCAGTCTCGCCGACCCCGACGACGGCCGCGGCTTCATGCTCGCC GGCATCGCCGAGATGTGGCTGCGCCATCCGCACGAGGCCAAGACCCTGCTGCAGCACGCGATCGCGCTCAATCCGAGCCT CGCGCTGGCGCACGCCCAGCTCGGCGGCTGCTACAATCTCGCCGGCGAGCCGGCCAAAGCGATCGATCACCTCAAGGCGT CGCTGCGGCTGAGCTCGAACGATCCGAACATCTTCTATGCGCTGGGCGAACTGGCGATGTCGCACACCATGTGCGGCCGC TGGGCCGACGCGGCCGAGCACGCCTCGCTGTCGCTGGCCCGCCGCCCGGCCTATTGGTACGCGCACGTTCTCAAGATCAA CGCGCTGGCGCGCGGCGGTCATCTCGCCGCGGCGCGGCTCGCGACCGATGAATTACTTGCTGTCAAGCCGAATTTTTCGC GGCGTTACATCGAATGGTTGCCGTTCGTCGATAGAACATGGATTGACCATTTCGTCGAAGGCCTGAAAATGGTGCCGGGC CGCGACGCGGACTGGCTGGAGCGCGACAGTCAAGAAAGCCCCGCGCATTTTGAGCCGAATTGA
Upstream 100 bases:
>100_bases TCTTATCGAACTGTTTCCGGCGTGAAATTCACGTGATAGACGCGTGAAAAATGCTATTCTGAGTTGAATCCGGATGATCG AAGTTATGTCGGAGACGTCG
Downstream 100 bases:
>100_bases TCGGCGAGACCGATTTTGATGTGTTTTTTTGAGGTGGCCGATGTTCACGCTCAAGTACTACGACGCGATCAAGAAAGCCC AGTCCGACACCGCTTCCGCC
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 3; Adenylyl cyclase 3 [H]
Number of amino acids: Translated: 580; Mature: 580
Protein sequence:
>580_residues MRFSVRLLGPFQLSTPDGRRVEISSKKGTAVIAMLAMSRDGEHTRGWLQDRLWGSRGHAEAAGSLRRELSNLRKLLNGAG IELLVSDRDRVRLRLDRIVVDARDPSADPAIAGEFLEGFDIPGEASFRDWLREQRARLMRGPRPPAPAAPVPGGLPSHIL DTSQPPVGFTGNQAIAVLPFTNVTGDETLDYLAEGISEELIVGLSRIRWLPVIARSSSFSFADTIDRKVIGQRLGAHYLI EGHLYRAYDSFGVSASLSEAATGYAIWSRRFTLQSPALRDELEQFVNELVAQLEIRIEHAEQIRIRNKRQDALGVSDLIW RGRWHLNRLTRADSDMAQKLFADALALDPDSAEALIQVTSALGWSIWAGRQPQEQILRMRKLAKQASLADPDDGRGFMLA GIAEMWLRHPHEAKTLLQHAIALNPSLALAHAQLGGCYNLAGEPAKAIDHLKASLRLSSNDPNIFYALGELAMSHTMCGR WADAAEHASLSLARRPAYWYAHVLKINALARGGHLAAARLATDELLAVKPNFSRRYIEWLPFVDRTWIDHFVEGLKMVPG RDADWLERDSQESPAHFEPN
Sequences:
>Translated_580_residues MRFSVRLLGPFQLSTPDGRRVEISSKKGTAVIAMLAMSRDGEHTRGWLQDRLWGSRGHAEAAGSLRRELSNLRKLLNGAG IELLVSDRDRVRLRLDRIVVDARDPSADPAIAGEFLEGFDIPGEASFRDWLREQRARLMRGPRPPAPAAPVPGGLPSHIL DTSQPPVGFTGNQAIAVLPFTNVTGDETLDYLAEGISEELIVGLSRIRWLPVIARSSSFSFADTIDRKVIGQRLGAHYLI EGHLYRAYDSFGVSASLSEAATGYAIWSRRFTLQSPALRDELEQFVNELVAQLEIRIEHAEQIRIRNKRQDALGVSDLIW RGRWHLNRLTRADSDMAQKLFADALALDPDSAEALIQVTSALGWSIWAGRQPQEQILRMRKLAKQASLADPDDGRGFMLA GIAEMWLRHPHEAKTLLQHAIALNPSLALAHAQLGGCYNLAGEPAKAIDHLKASLRLSSNDPNIFYALGELAMSHTMCGR WADAAEHASLSLARRPAYWYAHVLKINALARGGHLAAARLATDELLAVKPNFSRRYIEWLPFVDRTWIDHFVEGLKMVPG RDADWLERDSQESPAHFEPN >Mature_580_residues MRFSVRLLGPFQLSTPDGRRVEISSKKGTAVIAMLAMSRDGEHTRGWLQDRLWGSRGHAEAAGSLRRELSNLRKLLNGAG IELLVSDRDRVRLRLDRIVVDARDPSADPAIAGEFLEGFDIPGEASFRDWLREQRARLMRGPRPPAPAAPVPGGLPSHIL DTSQPPVGFTGNQAIAVLPFTNVTGDETLDYLAEGISEELIVGLSRIRWLPVIARSSSFSFADTIDRKVIGQRLGAHYLI EGHLYRAYDSFGVSASLSEAATGYAIWSRRFTLQSPALRDELEQFVNELVAQLEIRIEHAEQIRIRNKRQDALGVSDLIW RGRWHLNRLTRADSDMAQKLFADALALDPDSAEALIQVTSALGWSIWAGRQPQEQILRMRKLAKQASLADPDDGRGFMLA GIAEMWLRHPHEAKTLLQHAIALNPSLALAHAQLGGCYNLAGEPAKAIDHLKASLRLSSNDPNIFYALGELAMSHTMCGR WADAAEHASLSLARRPAYWYAHVLKINALARGGHLAAARLATDELLAVKPNFSRRYIEWLPFVDRTWIDHFVEGLKMVPG RDADWLERDSQESPAHFEPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00515 TPR_1 [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 64529; Mature: 64529
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFSVRLLGPFQLSTPDGRRVEISSKKGTAVIAMLAMSRDGEHTRGWLQDRLWGSRGHAE CCEEEEEECCEEECCCCCCEEEEECCCCCEEEEEEHHCCCCCHHHHHHHHHHCCCCCCHH AAGSLRRELSNLRKLLNGAGIELLVSDRDRVRLRLDRIVVDARDPSADPAIAGEFLEGFD HHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHEEEEEEEEECCCCCCCCHHHHHHHHCCC IPGEASFRDWLREQRARLMRGPRPPAPAAPVPGGLPSHILDTSQPPVGFTGNQAIAVLPF CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEEEE TNVTGDETLDYLAEGISEELIVGLSRIRWLPVIARSSSFSFADTIDRKVIGQRLGAHYLI CCCCCHHHHHHHHHCCHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHCCEEEE EGHLYRAYDSFGVSASLSEAATGYAIWSRRFTLQSPALRDELEQFVNELVAQLEIRIEHA ECEEEEHHHHCCCCCCHHHHHCCHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH EQIRIRNKRQDALGVSDLIWRGRWHLNRLTRADSDMAQKLFADALALDPDSAEALIQVTS HHHHHHCCHHHHCCHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHH ALGWSIWAGRQPQEQILRMRKLAKQASLADPDDGRGFMLAGIAEMWLRHPHEAKTLLQHA HHCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHH IALNPSLALAHAQLGGCYNLAGEPAKAIDHLKASLRLSSNDPNIFYALGELAMSHTMCGR HHCCCCHHHHHHHHCCEECCCCCHHHHHHHHHHHEEECCCCCCEEEHHHHHHHHHHHHHH WADAAEHASLSLARRPAYWYAHVLKINALARGGHLAAARLATDELLAVKPNFSRRYIEWL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEECCCCCHHHHHHC PFVDRTWIDHFVEGLKMVPGRDADWLERDSQESPAHFEPN CCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCC >Mature Secondary Structure MRFSVRLLGPFQLSTPDGRRVEISSKKGTAVIAMLAMSRDGEHTRGWLQDRLWGSRGHAE CCEEEEEECCEEECCCCCCEEEEECCCCCEEEEEEHHCCCCCHHHHHHHHHHCCCCCCHH AAGSLRRELSNLRKLLNGAGIELLVSDRDRVRLRLDRIVVDARDPSADPAIAGEFLEGFD HHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHEEEEEEEEECCCCCCCCHHHHHHHHCCC IPGEASFRDWLREQRARLMRGPRPPAPAAPVPGGLPSHILDTSQPPVGFTGNQAIAVLPF CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEEEE TNVTGDETLDYLAEGISEELIVGLSRIRWLPVIARSSSFSFADTIDRKVIGQRLGAHYLI CCCCCHHHHHHHHHCCHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHCCEEEE EGHLYRAYDSFGVSASLSEAATGYAIWSRRFTLQSPALRDELEQFVNELVAQLEIRIEHA ECEEEEHHHHCCCCCCHHHHHCCHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH EQIRIRNKRQDALGVSDLIWRGRWHLNRLTRADSDMAQKLFADALALDPDSAEALIQVTS HHHHHHCCHHHHCCHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHH ALGWSIWAGRQPQEQILRMRKLAKQASLADPDDGRGFMLAGIAEMWLRHPHEAKTLLQHA HHCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHH IALNPSLALAHAQLGGCYNLAGEPAKAIDHLKASLRLSSNDPNIFYALGELAMSHTMCGR HHCCCCHHHHHHHHCCEECCCCCHHHHHHHHHHHEEECCCCCCEEEHHHHHHHHHHHHHH WADAAEHASLSLARRPAYWYAHVLKINALARGGHLAAARLATDELLAVKPNFSRRYIEWL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEECCCCCHHHHHHC PFVDRTWIDHFVEGLKMVPGRDADWLERDSQESPAHFEPN CCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10485295; 11481432 [H]