Click here to switch to the map view.

The map label for this gene is 86747954

Identifier: 86747954

GI number: 86747954

Start: 942521

End: 942772

Strand: Direct

Name: 86747954

Synonym: RPB_0828

Alternate gene names: NA

Gene position: 942521-942772 (Clockwise)

Preceding gene: 86747953

Following gene: 86747955

Centisome position: 17.68

GC content: 71.03

Gene sequence:

>252_bases
GTGAACCGCACTGCCGGCCCATCGCGATGGGCGCTTGTTGTGATTGCCGTAGCGACGCTGGCCCTCGCGGGCTGCGGCCG
CAAAGGCGGGCTGGATCTGCCGTCCGGCGCCGCCGAGACGCCGGCGTCGTCGGCCTCTTCGACGCCGGCCGCCAAGGGCG
ACGTGTTCGATTCGTCCTACGGCACCAACGCGCCGCCGGTCGCCGCCAAGGGCCAGAAGAAGCGCATCATCCTCGACCCG
CTGCTGGACTGA

Upstream 100 bases:

>100_bases
TGGGCTGAACCGGGAAGCCGCGGGATAATTCTCTGCCGCGCCGGGTCTCGCCAGACCGCGGCAATCTCTGTAGGATGCGG
CCGCAATTGGGGATTTCGAC

Downstream 100 bases:

>100_bases
TCCGCGATGCGTCATTTCGACTACCGCGACGGCGTGCTGCACGCCGAAGGCGTTGGCCTTGAAGTGCTCGCGCGCGAGGT
CGGCACGCCGTTTTATTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MNRTAGPSRWALVVIAVATLALAGCGRKGGLDLPSGAAETPASSASSTPAAKGDVFDSSYGTNAPPVAAKGQKKRIILDP
LLD

Sequences:

>Translated_83_residues
MNRTAGPSRWALVVIAVATLALAGCGRKGGLDLPSGAAETPASSASSTPAAKGDVFDSSYGTNAPPVAAKGQKKRIILDP
LLD
>Mature_83_residues
MNRTAGPSRWALVVIAVATLALAGCGRKGGLDLPSGAAETPASSASSTPAAKGDVFDSSYGTNAPPVAAKGQKKRIILDP
LLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8277; Mature: 8277

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRTAGPSRWALVVIAVATLALAGCGRKGGLDLPSGAAETPASSASSTPAAKGDVFDSSY
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GTNAPPVAAKGQKKRIILDPLLD
CCCCCCCCCCCCCCEEECCCCCC
>Mature Secondary Structure
MNRTAGPSRWALVVIAVATLALAGCGRKGGLDLPSGAAETPASSASSTPAAKGDVFDSSY
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GTNAPPVAAKGQKKRIILDPLLD
CCCCCCCCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA