Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86747882

Identifier: 86747882

GI number: 86747882

Start: 846974

End: 848293

Strand: Direct

Name: 86747882

Synonym: RPB_0756

Alternate gene names: NA

Gene position: 846974-848293 (Clockwise)

Preceding gene: 86747881

Following gene: 86747885

Centisome position: 15.89

GC content: 67.65

Gene sequence:

>1320_bases
ATGAGAGCGATATTCGGGCGACTGCACCGCTGGGCCGGACTACTCACCGCCGCCTTTCTGTTCTTCTCAGGCGTCACCGG
CGCGATCATCTCGTGGGACCACGAGATCGACGAGACGCTCAACGCCAAGTTCTACGATGTCTCGACGCCCGGGCCGGCGA
TGGCGTCGGTCGACCTCGTCAAGCAGATCGAGAGCCGCGATCCGCGCGCGCGCGTGATCTTCTTTCCGATGACGCCGGAG
CCCGGCCATTCGCTGGCGTTCTTCGTGCAGCCGCGGATCGATCCGTCGACCAGCAAGCGCTACCCGCTCGACTACAACCA
GATCTTCCTCGATCCCAACACCGGCGCCGAACTGGGGCGCCGCTATTGGGGCGCGGTGTGGCCGGTGACCAGCGAGAACT
TCGTCTCGTTTCTCTACAAGCTGCACTACACCATGCACATTCCCGAATTCTGGGGCAGCGACCGCTGGGGCGCGCGGCTG
CTCGGCATCATCGCGATCATCTGGACGATCGACTGCTTCGTCGGCTTCTACCTGACGCTGCCGGCGCGGCGGCTGCTACG
CGCCGGGCAGGCGCCGTCGGTGAAGCGCGAACTCGGCAAGGGCTTCTGGGCGCGCTGGGCGCCGGCCTGGAAGATCAAAA
CCTCGGGCAGCGCCTACCGGATCAATTTCGACATCCATCGCGCCTTCAGCCTGTGGACCTGGGCGGTGCTGTTCGTGGTC
GCCTTCACGGCGTTCTCGCTGAATTTGTATTTCGAGGTGTTCTCGCCGATCATGAAGACGGTGTCGAACTACACGCCGAC
GCCGTTCGAGCAGCGGCCGTATCGCAGCCTCGACGATCCGATCGAGCCGAAGATGAGTTTCGCGCAGATCGCCGCGCGCG
CGGAAGCCGACGGCAAGGCGCGCGGCTTCACCGCGCCGCTCGGCTCGTTGTTCTACGGCCCGGCGCACGGCGTATTCGCC
GCCCAGTTCTTCAAGCCGGGCGACGATCACGGCGCCGCCGGCGTCGGGCCGGCGCAATTGTATTACGACAGCGAGGACGG
CCGCCCGCTCGGCGAGCGGCTGCCCTGGGTCGGCACCGCGGCCGACATCTTCGTGCAGATGCAGTTCCCGCTGCATTCCG
GAAGAATCCTGGGCCTGCCCGGCCGCATCCTGATCTCGGCGATGGGGCTCGTGGTGGCGGCGCTGTCGGTCACCGGCGTG
GTGATCTGGTGGCGCAAGCGCCGCGCCCGGATCGCCTCGCGGCGCGGCGCTACGCGCGCGGGCGCCCGCCCGGCCGGATC
GCGCTGGCCTGTACCGGGCGAGCCCGAGCGCGCCGGCTGA

Upstream 100 bases:

>100_bases
ACTCGACAGCCCAACGCGGTAACTCCATCGGAGCTCGTCCTGCCTGGCGCCGGACGGCTTCGCGCCAGCGCGCAACGACA
ACGGATGGGGCCGGTTCGGC

Downstream 100 bases:

>100_bases
GGGTCGCGGCCATCGCGGCGCCGGGGCCCGCGCTGGATCAGCGTGGTCGGCGCGTCCGGCCGTCCACGCCCATGTCTTGC
CTCAGTGCCGCGTCATCGCA

Product: PepSY-associated TM helix

Products: NA

Alternate protein names: PepSY-Associated TM Helix; PepSY-Associated TM Helix Domain Protein; Iron-Regulated Membrane Protein; PepSY-Associated TM Helix Family; Transmembrane Protein; Peptidase; Pepsy-Associated Tm Helix Domain Protein

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MRAIFGRLHRWAGLLTAAFLFFSGVTGAIISWDHEIDETLNAKFYDVSTPGPAMASVDLVKQIESRDPRARVIFFPMTPE
PGHSLAFFVQPRIDPSTSKRYPLDYNQIFLDPNTGAELGRRYWGAVWPVTSENFVSFLYKLHYTMHIPEFWGSDRWGARL
LGIIAIIWTIDCFVGFYLTLPARRLLRAGQAPSVKRELGKGFWARWAPAWKIKTSGSAYRINFDIHRAFSLWTWAVLFVV
AFTAFSLNLYFEVFSPIMKTVSNYTPTPFEQRPYRSLDDPIEPKMSFAQIAARAEADGKARGFTAPLGSLFYGPAHGVFA
AQFFKPGDDHGAAGVGPAQLYYDSEDGRPLGERLPWVGTAADIFVQMQFPLHSGRILGLPGRILISAMGLVVAALSVTGV
VIWWRKRRARIASRRGATRAGARPAGSRWPVPGEPERAG

Sequences:

>Translated_439_residues
MRAIFGRLHRWAGLLTAAFLFFSGVTGAIISWDHEIDETLNAKFYDVSTPGPAMASVDLVKQIESRDPRARVIFFPMTPE
PGHSLAFFVQPRIDPSTSKRYPLDYNQIFLDPNTGAELGRRYWGAVWPVTSENFVSFLYKLHYTMHIPEFWGSDRWGARL
LGIIAIIWTIDCFVGFYLTLPARRLLRAGQAPSVKRELGKGFWARWAPAWKIKTSGSAYRINFDIHRAFSLWTWAVLFVV
AFTAFSLNLYFEVFSPIMKTVSNYTPTPFEQRPYRSLDDPIEPKMSFAQIAARAEADGKARGFTAPLGSLFYGPAHGVFA
AQFFKPGDDHGAAGVGPAQLYYDSEDGRPLGERLPWVGTAADIFVQMQFPLHSGRILGLPGRILISAMGLVVAALSVTGV
VIWWRKRRARIASRRGATRAGARPAGSRWPVPGEPERAG
>Mature_439_residues
MRAIFGRLHRWAGLLTAAFLFFSGVTGAIISWDHEIDETLNAKFYDVSTPGPAMASVDLVKQIESRDPRARVIFFPMTPE
PGHSLAFFVQPRIDPSTSKRYPLDYNQIFLDPNTGAELGRRYWGAVWPVTSENFVSFLYKLHYTMHIPEFWGSDRWGARL
LGIIAIIWTIDCFVGFYLTLPARRLLRAGQAPSVKRELGKGFWARWAPAWKIKTSGSAYRINFDIHRAFSLWTWAVLFVV
AFTAFSLNLYFEVFSPIMKTVSNYTPTPFEQRPYRSLDDPIEPKMSFAQIAARAEADGKARGFTAPLGSLFYGPAHGVFA
AQFFKPGDDHGAAGVGPAQLYYDSEDGRPLGERLPWVGTAADIFVQMQFPLHSGRILGLPGRILISAMGLVVAALSVTGV
VIWWRKRRARIASRRGATRAGARPAGSRWPVPGEPERAG

Specific function: Unknown

COG id: COG3182

COG function: function code S; Uncharacterized iron-regulated membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49095; Mature: 49095

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAIFGRLHRWAGLLTAAFLFFSGVTGAIISWDHEIDETLNAKFYDVSTPGPAMASVDLV
CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHCCCEEEECCCCCCHHHHHHHH
KQIESRDPRARVIFFPMTPEPGHSLAFFVQPRIDPSTSKRYPLDYNQIFLDPNTGAELGR
HHHHCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCCHHHHH
RYWGAVWPVTSENFVSFLYKLHYTMHIPEFWGSDRWGARLLGIIAIIWTIDCFVGFYLTL
HHCCEECCCCCHHHHHHHHHHHHHEECHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
PARRLLRAGQAPSVKRELGKGFWARWAPAWKIKTSGSAYRINFDIHRAFSLWTWAVLFVV
HHHHHHHCCCCCHHHHHHCCCHHHHCCCCEEEEECCCEEEEEEEHHHHHHHHHHHHHHHH
AFTAFSLNLYFEVFSPIMKTVSNYTPTPFEQRPYRSLDDPIEPKMSFAQIAARAEADGKA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
RGFTAPLGSLFYGPAHGVFAAQFFKPGDDHGAAGVGPAQLYYDSEDGRPLGERLPWVGTA
CCCCCCHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCHHEEEECCCCCCHHHCCCCCCCC
ADIFVQMQFPLHSGRILGLPGRILISAMGLVVAALSVTGVVIWWRKRRARIASRRGATRA
EEEEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHCCCCCC
GARPAGSRWPVPGEPERAG
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRAIFGRLHRWAGLLTAAFLFFSGVTGAIISWDHEIDETLNAKFYDVSTPGPAMASVDLV
CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHCCCEEEECCCCCCHHHHHHHH
KQIESRDPRARVIFFPMTPEPGHSLAFFVQPRIDPSTSKRYPLDYNQIFLDPNTGAELGR
HHHHCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCCHHHHH
RYWGAVWPVTSENFVSFLYKLHYTMHIPEFWGSDRWGARLLGIIAIIWTIDCFVGFYLTL
HHCCEECCCCCHHHHHHHHHHHHHEECHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
PARRLLRAGQAPSVKRELGKGFWARWAPAWKIKTSGSAYRINFDIHRAFSLWTWAVLFVV
HHHHHHHCCCCCHHHHHHCCCHHHHCCCCEEEEECCCEEEEEEEHHHHHHHHHHHHHHHH
AFTAFSLNLYFEVFSPIMKTVSNYTPTPFEQRPYRSLDDPIEPKMSFAQIAARAEADGKA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
RGFTAPLGSLFYGPAHGVFAAQFFKPGDDHGAAGVGPAQLYYDSEDGRPLGERLPWVGTA
CCCCCCHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCHHEEEECCCCCCHHHCCCCCCCC
ADIFVQMQFPLHSGRILGLPGRILISAMGLVVAALSVTGVVIWWRKRRARIASRRGATRA
EEEEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHCCCCCC
GARPAGSRWPVPGEPERAG
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA