Click here to switch to the map view.

The map label for this gene is 86747501

Identifier: 86747501

GI number: 86747501

Start: 415238

End: 415639

Strand: Direct

Name: 86747501

Synonym: RPB_0375

Alternate gene names: NA

Gene position: 415238-415639 (Clockwise)

Preceding gene: 86747500

Following gene: 86747502

Centisome position: 7.79

GC content: 60.2

Gene sequence:

>402_bases
ATGCGTTCTGAGATCACAGATCTCGCACTCCGCGACATTCTGCATCACATCGATCTGGCGACTGAGTTCGTCGCCAACAC
CGACCTCGTGGTTTTCAAGAACGATCTGCGTACTCTGTATGCCGTAACGCGATGTCTCGAGATCATCTCGGAGGCGTCAC
GTCGCGTCGCGAACGACGTCAAGATACGCCATCCGTCGATCGGTTGGAGACAGATCGCAGCCGCGGGCAATGTCTATCGT
CACGACTACGAAGATGTCGCGGCCCAGATGGTATGGGACACGGTGCATCGCGCCTTGCCCGCACTGAGAGCGGCGGTGAG
CCGGGAGCTCGCAGACAAGCTTCAGTCTCCGGTTCCCCCGCACACGCATCGAGGCACGCCGCCGCCGCCCGTCGATGGTT
AA

Upstream 100 bases:

>100_bases
AAAGACTACATCGCGGGCCTGTTCGATCGCCCGGTCGACGTGGTGAACCGCGACCAGCTCAAGGCGCACGTCGCGCCGAG
CGCCGAAGCCGACGCGGTCT

Downstream 100 bases:

>100_bases
TCGCGTCTTAACCTCGCCGTATCTATGGTGGCTGATCTGTTGTCGCCCGCGCCGGAATGCGGCCGGGCGCCTTGCAAAAC
TGGCGTTTTCGAATGGCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MRSEITDLALRDILHHIDLATEFVANTDLVVFKNDLRTLYAVTRCLEIISEASRRVANDVKIRHPSIGWRQIAAAGNVYR
HDYEDVAAQMVWDTVHRALPALRAAVSRELADKLQSPVPPHTHRGTPPPPVDG

Sequences:

>Translated_133_residues
MRSEITDLALRDILHHIDLATEFVANTDLVVFKNDLRTLYAVTRCLEIISEASRRVANDVKIRHPSIGWRQIAAAGNVYR
HDYEDVAAQMVWDTVHRALPALRAAVSRELADKLQSPVPPHTHRGTPPPPVDG
>Mature_133_residues
MRSEITDLALRDILHHIDLATEFVANTDLVVFKNDLRTLYAVTRCLEIISEASRRVANDVKIRHPSIGWRQIAAAGNVYR
HDYEDVAAQMVWDTVHRALPALRAAVSRELADKLQSPVPPHTHRGTPPPPVDG

Specific function: Unknown

COG id: COG2361

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0331 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008201 [H]

Pfam domain/function: PF01934 DUF86 [H]

EC number: NA

Molecular weight: Translated: 14919; Mature: 14919

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSEITDLALRDILHHIDLATEFVANTDLVVFKNDLRTLYAVTRCLEIISEASRRVANDV
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KIRHPSIGWRQIAAAGNVYRHDYEDVAAQMVWDTVHRALPALRAAVSRELADKLQSPVPP
CCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
HTHRGTPPPPVDG
CCCCCCCCCCCCC
>Mature Secondary Structure
MRSEITDLALRDILHHIDLATEFVANTDLVVFKNDLRTLYAVTRCLEIISEASRRVANDV
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KIRHPSIGWRQIAAAGNVYRHDYEDVAAQMVWDTVHRALPALRAAVSRELADKLQSPVPP
CCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
HTHRGTPPPPVDG
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11932238 [H]