| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86747284
Identifier: 86747284
GI number: 86747284
Start: 170344
End: 170826
Strand: Direct
Name: 86747284
Synonym: RPB_0157
Alternate gene names: NA
Gene position: 170344-170826 (Clockwise)
Preceding gene: 86747280
Following gene: 86747292
Centisome position: 3.19
GC content: 67.29
Gene sequence:
>483_bases ATGCCGAAGACGATTCTCGAAGAAGTCCGCGCTTACGACACCAATTCGATCGTGGCCCTCGCCGGCCATCCGATCCACGC CATGATGGTCTCGTTTCCGATCGCGCTGGTGATCGCGACGCTCGGCTGCGACATCTTCTACTGGTGGGGCGGCGATCCGT TCTGGGCGCGCGCCGGGCTGTGGGCCAGCGGCTTCGCGTTCTGGCTCGGCGTCGCCGCCAGTCTCGCCGGCACCGCGGAA CTGCTGCTGGTCGAGGGCATACGCAAGCGCGCGGCGAGCTGGATGCACGCCATCGCCGGGGTGATGCTGGTGTCGATCGC CGGCGCCAATTGGGGTCTGCGGCTGGTCGACCACGAGAACGTGCTGCCGGTCGGCCTGATGGTGTCGGCGCTGGGCTCGG TGTTCGTCGGCATCGCCGGCTGGCACGGCGGCAAGCTGGTGTTCGATCACGGCATCGGCCTGATGGTCTCGACGAAGGAC TGA
Upstream 100 bases:
>100_bases GCGGCCCCCCGCAGCCGGCCAGCGGCAATCCCGACGCCGCGACGATGCCGGCGGTGAACCAAGCGCGGCATCGGCGCATT AGGTCGGGGCGAGGTGCAAG
Downstream 100 bases:
>100_bases AGTCCCCCGGGCTGCCGCATCCATGGCGGAAAGGCCGCGGTTTCGATCGCAGGCTTGTCGAGGATCAGCACCAGGATGAC GCCGATCACCGCGACCGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MPKTILEEVRAYDTNSIVALAGHPIHAMMVSFPIALVIATLGCDIFYWWGGDPFWARAGLWASGFAFWLGVAASLAGTAE LLLVEGIRKRAASWMHAIAGVMLVSIAGANWGLRLVDHENVLPVGLMVSALGSVFVGIAGWHGGKLVFDHGIGLMVSTKD
Sequences:
>Translated_160_residues MPKTILEEVRAYDTNSIVALAGHPIHAMMVSFPIALVIATLGCDIFYWWGGDPFWARAGLWASGFAFWLGVAASLAGTAE LLLVEGIRKRAASWMHAIAGVMLVSIAGANWGLRLVDHENVLPVGLMVSALGSVFVGIAGWHGGKLVFDHGIGLMVSTKD >Mature_159_residues PKTILEEVRAYDTNSIVALAGHPIHAMMVSFPIALVIATLGCDIFYWWGGDPFWARAGLWASGFAFWLGVAASLAGTAEL LLVEGIRKRAASWMHAIAGVMLVSIAGANWGLRLVDHENVLPVGLMVSALGSVFVGIAGWHGGKLVFDHGIGLMVSTKD
Specific function: Unknown
COG id: COG4244
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17028; Mature: 16897
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKTILEEVRAYDTNSIVALAGHPIHAMMVSFPIALVIATLGCDIFYWWGGDPFWARAGL CCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHCCC WASGFAFWLGVAASLAGTAELLLVEGIRKRAASWMHAIAGVMLVSIAGANWGLRLVDHEN HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC VLPVGLMVSALGSVFVGIAGWHGGKLVFDHGIGLMVSTKD CCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEECC >Mature Secondary Structure PKTILEEVRAYDTNSIVALAGHPIHAMMVSFPIALVIATLGCDIFYWWGGDPFWARAGL CHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHCCC WASGFAFWLGVAASLAGTAELLLVEGIRKRAASWMHAIAGVMLVSIAGANWGLRLVDHEN HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC VLPVGLMVSALGSVFVGIAGWHGGKLVFDHGIGLMVSTKD CCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA