| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is braE [H]
Identifier: 86747270
GI number: 86747270
Start: 156383
End: 157318
Strand: Direct
Name: braE [H]
Synonym: RPB_0143
Alternate gene names: 86747270
Gene position: 156383-157318 (Clockwise)
Preceding gene: 86747269
Following gene: 86747271
Centisome position: 2.93
GC content: 67.31
Gene sequence:
>936_bases ATGAGCCGCAGCAATATCGCCCTTCTGGTCCTGATCGCCTGCGTCGCGGCTCTGCCGCTGTTCGGCGGCGCCTATGCGCT GCGGCTCGGCACCATCGCCTGCATGTATGCGGTGCTGGCGCTGTCGTGGAACGTGGTCGGCGGCTTCGCCGGCTATCCGT CCTTCGCCACCGCGGCGTTCTTCGGCTTCGGCGCCTATTGCGGCGGCGTGCTGATGGGCAAGGGCTTCCCGCTGTGGGCG GCGGCGGCGGTCGCCGGATTGCTGGCGCTGGTCTCCGCGGTGGCGCTCGGCGCGGTGCTGCTGCGGCTGCGCGGGCATTA TTTCGCGATCGCCAGCCTGTCGCTCGCCGAGGTGCTGCGCGAGGTCGTCAACAACGCCACCGACCTCACCGGCGGCGGCA TGGGGCTGAACATCCCGCTCGCCTCCGGCGCCGGCGTGATGGCGGAGGCGACGTTCTTCTTCTACGCGATGTGGGGCGTG ATGCTGATCACCGCGCTGATGGTGATCGTGGTGGCGAATTCCAAGCTCGGCTTCGCGCTGAACTGCATCCGCCAGAACGA GACCGCCTCCAGCATGGTCGGCCTCAACACCACGCTGGCCAAGAGCATCGCCTTCGGCCTGTCGGCCTGCTTCGTCAGCG TCGCCGGCGGCATCTACGCCGCCTGGGTGCACTACATCGATCCGTCCGATGTGTTCGACATCCTGTATTCGGTCAAGCCT ATCGTGATGGCGCTGATGGGCGGACTCGGCTCGCCGCTCGGCGTCGCCTGTGGCGCCTTCATGTATCTCGGCCTCGAGGA AGTGGTGTGGCGCAACTACACCCACATCCACACCGGCGTGCTCGGCGTGCTGATCGTGATGCTGCTGCTGTTCCTGCCGC ACGGCCTGAGCTCGCTGCGGTTCGACCGGCTGCGGCGGAGGACGAAGCATGTCTGA
Upstream 100 bases:
>100_bases CGTTCTTCGGCCCGGCGCACGCCACCACGCTGTCGTTCCTGCTGTTGATCATCTTCCTGATCCTGCGCCCGCAGGGCCTG GTCGGCCGAAAGGGCTTCGA
Downstream 100 bases:
>100_bases GCTGCTGCAACTCACCGGCGTCTCCCGGCACTTCTCCGGCCTGCAGGCGCTGCGCGACGTCTCGCTGTCGGTGTCGGGCG GCGAGGTGCTCGGCCTTATC
Product: inner-membrane translocator
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MSRSNIALLVLIACVAALPLFGGAYALRLGTIACMYAVLALSWNVVGGFAGYPSFATAAFFGFGAYCGGVLMGKGFPLWA AAAVAGLLALVSAVALGAVLLRLRGHYFAIASLSLAEVLREVVNNATDLTGGGMGLNIPLASGAGVMAEATFFFYAMWGV MLITALMVIVVANSKLGFALNCIRQNETASSMVGLNTTLAKSIAFGLSACFVSVAGGIYAAWVHYIDPSDVFDILYSVKP IVMALMGGLGSPLGVACGAFMYLGLEEVVWRNYTHIHTGVLGVLIVMLLLFLPHGLSSLRFDRLRRRTKHV
Sequences:
>Translated_311_residues MSRSNIALLVLIACVAALPLFGGAYALRLGTIACMYAVLALSWNVVGGFAGYPSFATAAFFGFGAYCGGVLMGKGFPLWA AAAVAGLLALVSAVALGAVLLRLRGHYFAIASLSLAEVLREVVNNATDLTGGGMGLNIPLASGAGVMAEATFFFYAMWGV MLITALMVIVVANSKLGFALNCIRQNETASSMVGLNTTLAKSIAFGLSACFVSVAGGIYAAWVHYIDPSDVFDILYSVKP IVMALMGGLGSPLGVACGAFMYLGLEEVVWRNYTHIHTGVLGVLIVMLLLFLPHGLSSLRFDRLRRRTKHV >Mature_310_residues SRSNIALLVLIACVAALPLFGGAYALRLGTIACMYAVLALSWNVVGGFAGYPSFATAAFFGFGAYCGGVLMGKGFPLWAA AAVAGLLALVSAVALGAVLLRLRGHYFAIASLSLAEVLREVVNNATDLTGGGMGLNIPLASGAGVMAEATFFFYAMWGVM LITALMVIVVANSKLGFALNCIRQNETASSMVGLNTTLAKSIAFGLSACFVSVAGGIYAAWVHYIDPSDVFDILYSVKPI VMALMGGLGSPLGVACGAFMYLGLEEVVWRNYTHIHTGVLGVLIVMLLLFLPHGLSSLRFDRLRRRTKHV
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG4177
COG function: function code E; ABC-type branched-chain amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789865, Length=308, Percent_Identity=27.9220779220779, Blast_Score=96, Evalue=4e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 - InterPro: IPR021807 [H]
Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]
EC number: NA
Molecular weight: Translated: 32647; Mature: 32516
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRSNIALLVLIACVAALPLFGGAYALRLGTIACMYAVLALSWNVVGGFAGYPSFATAAF CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH FGFGAYCGGVLMGKGFPLWAAAAVAGLLALVSAVALGAVLLRLRGHYFAIASLSLAEVLR HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH EVVNNATDLTGGGMGLNIPLASGAGVMAEATFFFYAMWGVMLITALMVIVVANSKLGFAL HHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH NCIRQNETASSMVGLNTTLAKSIAFGLSACFVSVAGGIYAAWVHYIDPSDVFDILYSVKP HHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH IVMALMGGLGSPLGVACGAFMYLGLEEVVWRNYTHIHTGVLGVLIVMLLLFLPHGLSSLR HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH FDRLRRRTKHV HHHHHHHHCCC >Mature Secondary Structure SRSNIALLVLIACVAALPLFGGAYALRLGTIACMYAVLALSWNVVGGFAGYPSFATAAF CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH FGFGAYCGGVLMGKGFPLWAAAAVAGLLALVSAVALGAVLLRLRGHYFAIASLSLAEVLR HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH EVVNNATDLTGGGMGLNIPLASGAGVMAEATFFFYAMWGVMLITALMVIVVANSKLGFAL HHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH NCIRQNETASSMVGLNTTLAKSIAFGLSACFVSVAGGIYAAWVHYIDPSDVFDILYSVKP HHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH IVMALMGGLGSPLGVACGAFMYLGLEEVVWRNYTHIHTGVLGVLIVMLLLFLPHGLSSLR HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH FDRLRRRTKHV HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043 [H]