Click here to switch to the map view.

The map label for this gene is 86747231

Identifier: 86747231

GI number: 86747231

Start: 114968

End: 116236

Strand: Direct

Name: 86747231

Synonym: RPB_0104

Alternate gene names: NA

Gene position: 114968-116236 (Clockwise)

Preceding gene: 86747230

Following gene: 86747232

Centisome position: 2.16

GC content: 68.56

Gene sequence:

>1269_bases
ATGTCTCAGCAACGCTTCCCCTCCTCCGTCGATATCGCCATCATCGGCGCGGGCGCGGCCGGCCTCGGCGCCGCCCGAAC
GCTGGAGAATTCCGGCCTGTCGGTGATCGTGCTGGAGGCGCGCGACCGGGTGGGCGGCCGCGCCTTTACAAGGATGGTGA
CGCCCGAGATCGCCTTCGACGTCGGCTGCGGCTGGCTGCATTCGGCCGACGAGAACTGCTTCGTCGGCATCGCCGGGCAA
CTCGGCATCGCGATCGACACTACCCACCCGCCGTGGAGCGAGCGAAGCTTCGGCGACGTGTTTCCGCCACGCCAGCGCGC
CGCCTTCGGCAAGGCGCTCGACGCCTTCTACGAGCGCGTCTGGCGCGCCGCCAAGCGCAAGACCGATGCGGCCGCCGCAA
CCCTGCTCGAGCCCGGCAACCGCTGGAATCCGATGATCGACGCGGTGTCGACCTACGTCAACGGCGCCGAACTCGACCGC
ATCTCGATCCACGACGTCGAGGCCTATCGCGACACCGGGGTCAACTGGCGGATTCGCGCCGGCTACGGCGCGCTGATCGC
CGCCTATGGCGCGCCGTGTCCGGTGGCGCTGAATTGCCCGGTCAGCGTGGTCGATCACTCCGGCCTGCAACTGAAGATCG
AAACATCGCAAGGCCCGCTCACCGCGGACAAAGTGATTATCACCGTGCCGACCAACCTGATCGCCGACGGGGCGATCCGG
TTTGTGCCCGAGCTTCCCGACAAGGTCGAAGCCGCGCGCGGATTGCCGCTCGGCGCCGACGACAAGGTGATGCTGAAGCT
GTCCGACCCGAACGGCTTTCCCGCAGACGGCAATCTGCGCGGCGCCACGATGCGGGCGGCGATGGGGAGCTATCATCTGC
GGCCGTTCGGCCTGGACTGCATCGAAGGATTCTTCGGCGGTCGCTTCGCGCGTGAGCTGGAAGACGCCGGCGACGGCGCG
TTCGCGGCACAGAGCATCGACGAGATCGCCGACCTGCTCGGCAACGACATTCGCCGCAAGCTCACGCCGCTGGCGGAATC
GCGCTGGTCGCGCGACCCGTTCACGCGCGGCTCCTACTCGCACGCCTTGCCCGGCCACGCCGGCGCCCGCGCCATCCTGG
CCGCGCCGGTCGACGACCGCCTGTTCTTCGCCGGTGAAGCCACCTCCCCGCACTTCTTCTCCACCGCCCACGGCGCAAGA
GATAGTGGCGAGCGGGCCGCCAGAGAGGTGATGGCGCGACGCGTAGTAGCGGTGGCGAAGCTTGTGTGA

Upstream 100 bases:

>100_bases
ATGCCCAGCCTCGCGCCGGGCATTGTCGTTTCGGGCACGCTCTGTCACATCCAATCGTGACATCGTAGCGCCGTCATCGG
CGTGGTAAGAGCGCTGAACC

Downstream 100 bases:

>100_bases
TCGCCCGGGGATCCGTTCAGCGCTGCGGTGCAGAAGGGATCGCCATCGCCGCTTCCGCCCACCCTGTCCGATTCCGGCAC
AATCCTGTCCGCGGTGATGC

Product: amine oxidase

Products: NA

Alternate protein names: Twin-Arginine Translocation Pathway Signal; Amine Oxidase Protein; FAD Dependent Oxidoreductase; Polyamine Oxidase; Monoamine Oxidase; Amine Oxidase Family Protein; Amine Oxidoreductase Domain-Containing Protein; Flavin Containing Amine Oxidoreductase

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MSQQRFPSSVDIAIIGAGAAGLGAARTLENSGLSVIVLEARDRVGGRAFTRMVTPEIAFDVGCGWLHSADENCFVGIAGQ
LGIAIDTTHPPWSERSFGDVFPPRQRAAFGKALDAFYERVWRAAKRKTDAAAATLLEPGNRWNPMIDAVSTYVNGAELDR
ISIHDVEAYRDTGVNWRIRAGYGALIAAYGAPCPVALNCPVSVVDHSGLQLKIETSQGPLTADKVIITVPTNLIADGAIR
FVPELPDKVEAARGLPLGADDKVMLKLSDPNGFPADGNLRGATMRAAMGSYHLRPFGLDCIEGFFGGRFARELEDAGDGA
FAAQSIDEIADLLGNDIRRKLTPLAESRWSRDPFTRGSYSHALPGHAGARAILAAPVDDRLFFAGEATSPHFFSTAHGAR
DSGERAAREVMARRVVAVAKLV

Sequences:

>Translated_422_residues
MSQQRFPSSVDIAIIGAGAAGLGAARTLENSGLSVIVLEARDRVGGRAFTRMVTPEIAFDVGCGWLHSADENCFVGIAGQ
LGIAIDTTHPPWSERSFGDVFPPRQRAAFGKALDAFYERVWRAAKRKTDAAAATLLEPGNRWNPMIDAVSTYVNGAELDR
ISIHDVEAYRDTGVNWRIRAGYGALIAAYGAPCPVALNCPVSVVDHSGLQLKIETSQGPLTADKVIITVPTNLIADGAIR
FVPELPDKVEAARGLPLGADDKVMLKLSDPNGFPADGNLRGATMRAAMGSYHLRPFGLDCIEGFFGGRFARELEDAGDGA
FAAQSIDEIADLLGNDIRRKLTPLAESRWSRDPFTRGSYSHALPGHAGARAILAAPVDDRLFFAGEATSPHFFSTAHGAR
DSGERAAREVMARRVVAVAKLV
>Mature_421_residues
SQQRFPSSVDIAIIGAGAAGLGAARTLENSGLSVIVLEARDRVGGRAFTRMVTPEIAFDVGCGWLHSADENCFVGIAGQL
GIAIDTTHPPWSERSFGDVFPPRQRAAFGKALDAFYERVWRAAKRKTDAAAATLLEPGNRWNPMIDAVSTYVNGAELDRI
SIHDVEAYRDTGVNWRIRAGYGALIAAYGAPCPVALNCPVSVVDHSGLQLKIETSQGPLTADKVIITVPTNLIADGAIRF
VPELPDKVEAARGLPLGADDKVMLKLSDPNGFPADGNLRGATMRAAMGSYHLRPFGLDCIEGFFGGRFARELEDAGDGAF
AAQSIDEIADLLGNDIRRKLTPLAESRWSRDPFTRGSYSHALPGHAGARAILAAPVDDRLFFAGEATSPHFFSTAHGARD
SGERAAREVMARRVVAVAKLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI23097272, Length=283, Percent_Identity=26.8551236749117, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI28559074, Length=218, Percent_Identity=28.4403669724771, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI58761546, Length=286, Percent_Identity=26.2237762237762, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI58761544, Length=290, Percent_Identity=26.2068965517241, Blast_Score=66, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45122; Mature: 44990

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQQRFPSSVDIAIIGAGAAGLGAARTLENSGLSVIVLEARDRVGGRAFTRMVTPEIAFD
CCCCCCCCCCCEEEEECCCCCCCHHHHHCCCCCEEEEEECCCCCCCHHHHHHCCCHHEEE
VGCGWLHSADENCFVGIAGQLGIAIDTTHPPWSERSFGDVFPPRQRAAFGKALDAFYERV
CCCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
WRAAKRKTDAAAATLLEPGNRWNPMIDAVSTYVNGAELDRISIHDVEAYRDTGVNWRIRA
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCEEEEEEHHHHHCCCCCEEEEC
GYGALIAAYGAPCPVALNCPVSVVDHSGLQLKIETSQGPLTADKVIITVPTNLIADGAIR
CCCEEEECCCCCCCEEECCCEEEEECCCCEEEEECCCCCCEECCEEEEECCHHHHCCHHE
FVPELPDKVEAARGLPLGADDKVMLKLSDPNGFPADGNLRGATMRAAMGSYHLRPFGLDC
ECCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHH
IEGFFGGRFARELEDAGDGAFAAQSIDEIADLLGNDIRRKLTPLAESRWSRDPFTRGSYS
HHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
HALPGHAGARAILAAPVDDRLFFAGEATSPHFFSTAHGARDSGERAAREVMARRVVAVAK
CCCCCCCCCCEEEECCCCCCEEEECCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHH
LV
CC
>Mature Secondary Structure 
SQQRFPSSVDIAIIGAGAAGLGAARTLENSGLSVIVLEARDRVGGRAFTRMVTPEIAFD
CCCCCCCCCCEEEEECCCCCCCHHHHHCCCCCEEEEEECCCCCCCHHHHHHCCCHHEEE
VGCGWLHSADENCFVGIAGQLGIAIDTTHPPWSERSFGDVFPPRQRAAFGKALDAFYERV
CCCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
WRAAKRKTDAAAATLLEPGNRWNPMIDAVSTYVNGAELDRISIHDVEAYRDTGVNWRIRA
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCEEEEEEHHHHHCCCCCEEEEC
GYGALIAAYGAPCPVALNCPVSVVDHSGLQLKIETSQGPLTADKVIITVPTNLIADGAIR
CCCEEEECCCCCCCEEECCCEEEEECCCCEEEEECCCCCCEECCEEEEECCHHHHCCHHE
FVPELPDKVEAARGLPLGADDKVMLKLSDPNGFPADGNLRGATMRAAMGSYHLRPFGLDC
ECCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHH
IEGFFGGRFARELEDAGDGAFAAQSIDEIADLLGNDIRRKLTPLAESRWSRDPFTRGSYS
HHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
HALPGHAGARAILAAPVDDRLFFAGEATSPHFFSTAHGARDSGERAAREVMARRVVAVAK
CCCCCCCCCCEEEECCCCCCEEEECCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHH
LV
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA