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The map label for this gene is 86747227

Identifier: 86747227

GI number: 86747227

Start: 107004

End: 108446

Strand: Direct

Name: 86747227

Synonym: RPB_0100

Alternate gene names: NA

Gene position: 107004-108446 (Clockwise)

Preceding gene: 86747224

Following gene: 86747230

Centisome position: 2.01

GC content: 68.75

Gene sequence:

>1443_bases
ATGGATTTCAAGCGACTATTCGCCCGGTCGATGGACGAGCCCGAGCCGGTGGACCCTTTGCTGCATATGTCTGCGCGCCC
GGTGCGACGCAAGACGACGCTGATTTCGCTGGCCGCGATCCTGGCGCTGGTCGGCGCCATCAGTGCTGCGTATTATTTCG
CGATGCGGCCGACGACGCTGAAGATCGCCGTCGGTCCGCAGGCCAGCGACGATCTGCGGCTGATCCAGGCGCTGGCGCAG
GCGTTCTCGCGCGAGCGCAACATCGTCCGGATGCGGCCCATCGTCACCGACGGCCCGGCCGCCAGCGCCGCGGCGCTGAA
ATCAGACACCACCGATCTTGCGGTGATCCGCGGCGATCTGCCGGTGCCGCGCAACGCCCGCTCGGTCGCGGTGCTGCACA
AGAACGTCGCCGTGCTGTGGGCGCCCGGCCGGCCCGCGAGCGGCAAACGCAGGAAAGCCGCTGTCGCCGGGGTCACTACC
ATCACCCAGCTGGTCGGCAAGCGCGTCGGCGTGATCGGCCGCACCGAAGCCAATGCGGGGCTGCTCGCGGTGATCCTGCG
CCAATACGGCATCGACCCCGCCAAGGTCGAGAGCGTGCAGCTCACCGCGGCCGACGTCGCAGAGGCGGTGCGGACCGGCA
AGGCCGACGCGTTTCTCGCGGCCGGACCGCTCAACAGCAAGGTGATCGGCGAGGCTTTGGCGGCCACTGCGAGTTCCGGC
CGGGAGCCGGTGTTCCTCGGCATCGATTCGTCCGAAGCGCTGGCCGCCAACCATCCGTCGTATGAATCGGCGTCGATCCC
CGCCGGCGCCTTCGGCGGCGCCCCGGCGCGGCCGGGCGACGACGTCAAGACCATCAGCTTCTCGCATTACATCGTGGCGC
GCGACGGCGTCTCCGACGCCACCATCGCGAGTTTCACCCAACAATTGTTCACGGCGCGCCAGACCGTGATGACGGAGAAT
CCGCTGGCCGCGAAGATCGAGACGCCCGACACCGACAAGGACGCGGTGATCCCGGTGCAGGCGGGTGCCGCTGCCTATGT
CGACGGCGAGCAGCGCAGCTTTCTCGACCGCTACAGTGACCTGATCTGGTTTTCGCTGATGGGGCTGTCGGCGACCGGCT
CGCTCGGCGCCTGGTTCGCGAGCTATCTGCGGAAAGACGAACGCAACACCAACGCCTCGCAGCGCGACCGGCTGCTCGAC
ATGCTGGCGGCGGCGCGGCGCTGCGACGCGCAGGACGAACTCGACGCGATGCAGACCGAGGCCGATGCGATCCTGCGCGA
CGCGCTGAACTGCTACGAGAACGGCGCGATCGACAGCGCGGCGCTGACCGCCTTCAGCATCGCGCTGGAGCAGTTCCACA
ACGCCGTGGTCGATCGCAAGATGCTGCTGGCGGCGATCCCGCCGGCGCCACCGATCCGCCCGGCGCGGCCGCAGGTGGTG
TGA

Upstream 100 bases:

>100_bases
GGCCCAATGCGTCGCCAGCGCCGATTCACCATATCGGCGCGGGGCGGCGAAACGAAAGGTCGCACGGCGATGGAACTGCT
ATGATGGGGCTCTGACCGGG

Downstream 100 bases:

>100_bases
GCCCCGCCGTGATCACGCGCGGCGCAGCCGCCGCCAGCCGAGCAGGATGCCGCTGACCGAAATCACCAGCCCCGCCAGCG
ACAATACAATCACCACGATG

Product: TRAP transporter solute receptor TAXI family protein

Products: NA

Alternate protein names: TRAP Transporter Solute Receptor TAXI Family; TAXI Family TRAP Transporter Solute Receptor; Transmembrane Component; Transport System Periplasmic Component; Signal Peptide; Trap Transporter Solute Receptor Taxi Family; TRAP-Type Transport System

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MDFKRLFARSMDEPEPVDPLLHMSARPVRRKTTLISLAAILALVGAISAAYYFAMRPTTLKIAVGPQASDDLRLIQALAQ
AFSRERNIVRMRPIVTDGPAASAAALKSDTTDLAVIRGDLPVPRNARSVAVLHKNVAVLWAPGRPASGKRRKAAVAGVTT
ITQLVGKRVGVIGRTEANAGLLAVILRQYGIDPAKVESVQLTAADVAEAVRTGKADAFLAAGPLNSKVIGEALAATASSG
REPVFLGIDSSEALAANHPSYESASIPAGAFGGAPARPGDDVKTISFSHYIVARDGVSDATIASFTQQLFTARQTVMTEN
PLAAKIETPDTDKDAVIPVQAGAAAYVDGEQRSFLDRYSDLIWFSLMGLSATGSLGAWFASYLRKDERNTNASQRDRLLD
MLAAARRCDAQDELDAMQTEADAILRDALNCYENGAIDSAALTAFSIALEQFHNAVVDRKMLLAAIPPAPPIRPARPQVV

Sequences:

>Translated_480_residues
MDFKRLFARSMDEPEPVDPLLHMSARPVRRKTTLISLAAILALVGAISAAYYFAMRPTTLKIAVGPQASDDLRLIQALAQ
AFSRERNIVRMRPIVTDGPAASAAALKSDTTDLAVIRGDLPVPRNARSVAVLHKNVAVLWAPGRPASGKRRKAAVAGVTT
ITQLVGKRVGVIGRTEANAGLLAVILRQYGIDPAKVESVQLTAADVAEAVRTGKADAFLAAGPLNSKVIGEALAATASSG
REPVFLGIDSSEALAANHPSYESASIPAGAFGGAPARPGDDVKTISFSHYIVARDGVSDATIASFTQQLFTARQTVMTEN
PLAAKIETPDTDKDAVIPVQAGAAAYVDGEQRSFLDRYSDLIWFSLMGLSATGSLGAWFASYLRKDERNTNASQRDRLLD
MLAAARRCDAQDELDAMQTEADAILRDALNCYENGAIDSAALTAFSIALEQFHNAVVDRKMLLAAIPPAPPIRPARPQVV
>Mature_480_residues
MDFKRLFARSMDEPEPVDPLLHMSARPVRRKTTLISLAAILALVGAISAAYYFAMRPTTLKIAVGPQASDDLRLIQALAQ
AFSRERNIVRMRPIVTDGPAASAAALKSDTTDLAVIRGDLPVPRNARSVAVLHKNVAVLWAPGRPASGKRRKAAVAGVTT
ITQLVGKRVGVIGRTEANAGLLAVILRQYGIDPAKVESVQLTAADVAEAVRTGKADAFLAAGPLNSKVIGEALAATASSG
REPVFLGIDSSEALAANHPSYESASIPAGAFGGAPARPGDDVKTISFSHYIVARDGVSDATIASFTQQLFTARQTVMTEN
PLAAKIETPDTDKDAVIPVQAGAAAYVDGEQRSFLDRYSDLIWFSLMGLSATGSLGAWFASYLRKDERNTNASQRDRLLD
MLAAARRCDAQDELDAMQTEADAILRDALNCYENGAIDSAALTAFSIALEQFHNAVVDRKMLLAAIPPAPPIRPARPQVV

Specific function: Unknown

COG id: COG2358

COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50993; Mature: 50993

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFKRLFARSMDEPEPVDPLLHMSARPVRRKTTLISLAAILALVGAISAAYYFAMRPTTL
CCHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCEEE
KIAVGPQASDDLRLIQALAQAFSRERNIVRMRPIVTDGPAASAAALKSDTTDLAVIRGDL
EEEECCCCCHHHHHHHHHHHHHHHCCCEEEECCEECCCCCCHHHHHCCCCCCEEEEECCC
PVPRNARSVAVLHKNVAVLWAPGRPASGKRRKAAVAGVTTITQLVGKRVGVIGRTEANAG
CCCCCCCEEEEEECCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEECCCCCCH
LLAVILRQYGIDPAKVESVQLTAADVAEAVRTGKADAFLAAGPLNSKVIGEALAATASSG
HHHHHHHHHCCCHHHCCEEEEEHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCC
REPVFLGIDSSEALAANHPSYESASIPAGAFGGAPARPGDDVKTISFSHYIVARDGVSDA
CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCHH
TIASFTQQLFTARQTVMTENPLAAKIETPDTDKDAVIPVQAGAAAYVDGEQRSFLDRYSD
HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCEEEECCHHHHHHHHHHH
LIWFSLMGLSATGSLGAWFASYLRKDERNTNASQRDRLLDMLAAARRCDAQDELDAMQTE
HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
ADAILRDALNCYENGAIDSAALTAFSIALEQFHNAVVDRKMLLAAIPPAPPIRPARPQVV
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MDFKRLFARSMDEPEPVDPLLHMSARPVRRKTTLISLAAILALVGAISAAYYFAMRPTTL
CCHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCEEE
KIAVGPQASDDLRLIQALAQAFSRERNIVRMRPIVTDGPAASAAALKSDTTDLAVIRGDL
EEEECCCCCHHHHHHHHHHHHHHHCCCEEEECCEECCCCCCHHHHHCCCCCCEEEEECCC
PVPRNARSVAVLHKNVAVLWAPGRPASGKRRKAAVAGVTTITQLVGKRVGVIGRTEANAG
CCCCCCCEEEEEECCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEECCCCCCH
LLAVILRQYGIDPAKVESVQLTAADVAEAVRTGKADAFLAAGPLNSKVIGEALAATASSG
HHHHHHHHHCCCHHHCCEEEEEHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCC
REPVFLGIDSSEALAANHPSYESASIPAGAFGGAPARPGDDVKTISFSHYIVARDGVSDA
CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCHH
TIASFTQQLFTARQTVMTENPLAAKIETPDTDKDAVIPVQAGAAAYVDGEQRSFLDRYSD
HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCEEEECCHHHHHHHHHHH
LIWFSLMGLSATGSLGAWFASYLRKDERNTNASQRDRLLDMLAAARRCDAQDELDAMQTE
HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
ADAILRDALNCYENGAIDSAALTAFSIALEQFHNAVVDRKMLLAAIPPAPPIRPARPQVV
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA