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The map label for this gene is 86747165

Identifier: 86747165

GI number: 86747165

Start: 37966

End: 39186

Strand: Direct

Name: 86747165

Synonym: RPB_0038

Alternate gene names: NA

Gene position: 37966-39186 (Clockwise)

Preceding gene: 86747164

Following gene: 86747166

Centisome position: 0.71

GC content: 62.33

Gene sequence:

>1221_bases
ATGAAGAGCCTGATTCAGGCCGCCACGGCGGCTGTTGCTGCGATTGTGCTCACTGCCGCCCCGGCTGCGGCACAGAAGAA
ATACGACACCGGCGCCACCGATACCGAGATCAAGATCGGCCAGACCGTGCCGTTCTCCGGTCCCGCCTCGGCCTATGCGG
GCATCGGCAAGACCCAGGCGGCCTATATGCGGATGATCAACGATGCCGGCGGCATCAACGGCCGCAAGATCAACCTGATC
CAGTACGACGACGCCTATTCGCCGCCGAAAGCGGTCGAGCAGGTGCGCAAGCTGGTCGAAAGCGACGAGGTGCTGCTGAC
CTTCCAGATCATCGGCACCCCGTCCAACGCCGCGGTGCAGAAATATCTCAACCAGAAGAAGGTGCCGCAACTGCTCGCGG
CGACCGGCGCGACACGGTTCACCGATCCGAAGAATTTCCCCTGGACGATGGGCTACAACCCGAACTACCAGACCGAGGGT
CGGATCTACGCGCGCTACATCCTGAAGAACCACCCCGACGCCAAGATCGGCGTGCTGTTCCAGAACGACGATCTCGGCCG
CGACTACGTCACCGGCCTGCGGGCCGGCCTCGGCGACAAGGCCGACAAGATGATCGTGGCGGAGACGTCCTATGAACTCA
CCGACCCGACCGTCGACTCGCAGATCGTCAAGCTGAAATCCGCCGGCGCCACGCTGCTGTACGACGCATCGACGCCGCGC
TTCGCCGCGCAGGCGATCAAGAAAGTCGCCGATCTCGGCTGGAATCCGGTGCACATCCTCGACATCAACGCCAGCCCGGT
GTCGGCGACGCTGAAGCCCGCCGGCCTCGACATCTCCAAGGGCATCATCAGCGTCAATTACGGCAAGGACCCCGCCGACC
CGCAATGGGCCGACGACCCGGGCGTGAAGAAGTACTTCGCCTTCATGGACAAGTACTATCCCGAGGGCGACAAGATGAAC
ACCGTCAACAGCTACGGCTATTCCACCGCGGAGCTGCTGATCACCATCCTGAAGCAGTGCGGCGACAATCTCACCCGCGA
CAACATCATGAAGCAGGCCGCCAATCTGAAGAACGTCACGCTCGACCTGTCGCTGCCGGGCATGTCGATCAATACCTCGC
CGACCGACTTCCGCGTCAACAAGCAGTTGCGGATGATGAAGTTCAACGGCGAGCGCTGGGAGCTGTTCGGCCCGATCATT
GAGGACGACGCCGCGATGTGA

Upstream 100 bases:

>100_bases
CGACGGCGCCATTGCCAGCGCAGCGGTGCTGATCCACACTCCCTGCCAACGGCGGCTCGCAGAAGACCGCCGGTCACGAG
CCACAGGGAGTCGACGACCG

Downstream 100 bases:

>100_bases
GCCGGCGCGAATTCCGCACGAAGAAATCCCGGGCGCGGCGTCGCAGCCGATGCGCGCCGCAGCCCGGGACCGCCACGCGG
AGTTCCGGCCGCGACCCGGT

Product: extracellular ligand-binding receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MKSLIQAATAAVAAIVLTAAPAAAQKKYDTGATDTEIKIGQTVPFSGPASAYAGIGKTQAAYMRMINDAGGINGRKINLI
QYDDAYSPPKAVEQVRKLVESDEVLLTFQIIGTPSNAAVQKYLNQKKVPQLLAATGATRFTDPKNFPWTMGYNPNYQTEG
RIYARYILKNHPDAKIGVLFQNDDLGRDYVTGLRAGLGDKADKMIVAETSYELTDPTVDSQIVKLKSAGATLLYDASTPR
FAAQAIKKVADLGWNPVHILDINASPVSATLKPAGLDISKGIISVNYGKDPADPQWADDPGVKKYFAFMDKYYPEGDKMN
TVNSYGYSTAELLITILKQCGDNLTRDNIMKQAANLKNVTLDLSLPGMSINTSPTDFRVNKQLRMMKFNGERWELFGPII
EDDAAM

Sequences:

>Translated_406_residues
MKSLIQAATAAVAAIVLTAAPAAAQKKYDTGATDTEIKIGQTVPFSGPASAYAGIGKTQAAYMRMINDAGGINGRKINLI
QYDDAYSPPKAVEQVRKLVESDEVLLTFQIIGTPSNAAVQKYLNQKKVPQLLAATGATRFTDPKNFPWTMGYNPNYQTEG
RIYARYILKNHPDAKIGVLFQNDDLGRDYVTGLRAGLGDKADKMIVAETSYELTDPTVDSQIVKLKSAGATLLYDASTPR
FAAQAIKKVADLGWNPVHILDINASPVSATLKPAGLDISKGIISVNYGKDPADPQWADDPGVKKYFAFMDKYYPEGDKMN
TVNSYGYSTAELLITILKQCGDNLTRDNIMKQAANLKNVTLDLSLPGMSINTSPTDFRVNKQLRMMKFNGERWELFGPII
EDDAAM
>Mature_406_residues
MKSLIQAATAAVAAIVLTAAPAAAQKKYDTGATDTEIKIGQTVPFSGPASAYAGIGKTQAAYMRMINDAGGINGRKINLI
QYDDAYSPPKAVEQVRKLVESDEVLLTFQIIGTPSNAAVQKYLNQKKVPQLLAATGATRFTDPKNFPWTMGYNPNYQTEG
RIYARYILKNHPDAKIGVLFQNDDLGRDYVTGLRAGLGDKADKMIVAETSYELTDPTVDSQIVKLKSAGATLLYDASTPR
FAAQAIKKVADLGWNPVHILDINASPVSATLKPAGLDISKGIISVNYGKDPADPQWADDPGVKKYFAFMDKYYPEGDKMN
TVNSYGYSTAELLITILKQCGDNLTRDNIMKQAANLKNVTLDLSLPGMSINTSPTDFRVNKQLRMMKFNGERWELFGPII
EDDAAM

Specific function: Component of an amino-acid transport system (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 44256; Mature: 44256

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLIQAATAAVAAIVLTAAPAAAQKKYDTGATDTEIKIGQTVPFSGPASAYAGIGKTQA
CHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHCCCCHHH
AYMRMINDAGGINGRKINLIQYDDAYSPPKAVEQVRKLVESDEVLLTFQIIGTPSNAAVQ
HHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHH
KYLNQKKVPQLLAATGATRFTDPKNFPWTMGYNPNYQTEGRIYARYILKNHPDAKIGVLF
HHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEEECCCCCCEEEEEE
QNDDLGRDYVTGLRAGLGDKADKMIVAETSYELTDPTVDSQIVKLKSAGATLLYDASTPR
ECCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHEEEECCCCEEEEECCCCH
FAAQAIKKVADLGWNPVHILDINASPVSATLKPAGLDISKGIISVNYGKDPADPQWADDP
HHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCC
GVKKYFAFMDKYYPEGDKMNTVNSYGYSTAELLITILKQCGDNLTRDNIMKQAANLKNVT
CHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEE
LDLSLPGMSINTSPTDFRVNKQLRMMKFNGERWELFGPIIEDDAAM
EEEECCCCCCCCCCCCEEECCEEEEEEECCCEEEEECCCCCCCCCC
>Mature Secondary Structure
MKSLIQAATAAVAAIVLTAAPAAAQKKYDTGATDTEIKIGQTVPFSGPASAYAGIGKTQA
CHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHCCCCHHH
AYMRMINDAGGINGRKINLIQYDDAYSPPKAVEQVRKLVESDEVLLTFQIIGTPSNAAVQ
HHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHH
KYLNQKKVPQLLAATGATRFTDPKNFPWTMGYNPNYQTEGRIYARYILKNHPDAKIGVLF
HHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEEECCCCCCEEEEEE
QNDDLGRDYVTGLRAGLGDKADKMIVAETSYELTDPTVDSQIVKLKSAGATLLYDASTPR
ECCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHEEEECCCCEEEEECCCCH
FAAQAIKKVADLGWNPVHILDINASPVSATLKPAGLDISKGIISVNYGKDPADPQWADDP
HHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCC
GVKKYFAFMDKYYPEGDKMNTVNSYGYSTAELLITILKQCGDNLTRDNIMKQAANLKNVT
CHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEE
LDLSLPGMSINTSPTDFRVNKQLRMMKFNGERWELFGPIIEDDAAM
EEEECCCCCCCCCCCCEEECCEEEEEEECCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA