| Definition | Frankia sp. CcI3 chromosome, complete genome. |
|---|---|
| Accession | NC_007777 |
| Length | 5,433,628 |
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Identifier: 86742209
GI number:
Start: 4211793
End: 4216496
Strand: Direct
Name: Not Available
Synonym: Francci3_3527
Alternate gene names: NA
Gene position: NA
Preceding gene: 86742204
Following gene: 86742211
Centisome position: NA
GC content: NA
Gene sequence:
>4704_bases ATGAACCACACCGGCGGAAGGTTGTCGGTCCCTCGACGCAGACTGGTCAACGTGCCCAGCTTCGCTTCCCCCGATCCGCC GGATCCGCTCACGGCGTTCTCCGCCCCGACCCGGAGCTGGTTCGGCGCGGCCTTCACCGCCGCGACCCCCGCCCAGCGGG GCGCGTGGGAGGCGATTCGCACCGGCGGCAACGCGCTGGTCGTCGCACCCACGGGTTCGGGGAAGACACTGGCCGCCTTC CTGTGGTCGCTGGACACCCTGGCCCGCTCGGCGCCGCCGGCCGAGCCCACCCGGCGCTGCCGGGTGCTGTACGTCAGCCC ACTCAAGGCGCTGGCCGTCGACGTCGAACGGAACCTGCGGGCACCGCTCGCGGGGATACGCTCCGCCGCGCAACGGCTCG GTCTGCCCCAGCCGGACGTGACCGTGGGTCTGCGGTCGGGCGACACCCCCGCCGCCGAACGACGCGGTTTCGGCACCCGG CCCCCCGACGTCCTGATCACCACCCCGGAGTCGCTCTTCCTCATCCTCACCAGTGCCGCGCGGGAGTCGCTGCGCGGCGT CCGGACAGTGATCGTCGACGAGGTCCACGCGGTGGCGGGCACCAAGCGCGGCGCCCACCTCGCGCTGAGCCTGGAGCGTC TGGACGCCCTGCTGGACACCCCGGCCCAGCGGATCGGCCTGTCCGCCACGGTGCGGCCGGTCGAGGAGGCCGCCCGATTC CTGGGCGGAACGGCCCCGGTGGCGGTAGTCCGCCCGCCCGCGGCCAAGACCCTCCAGATCGACGTCGTGGTGCCGGTCGA GGACATGACCCAGCTCGGCGGACAGCTCCTCGACGGGTCCCCGGACGGCTCGGCGGCCTCCGCCCCGCACCGAGCGTCGA TCTGGCCGGCGGTCGAGCAGCGTGTCCTCGACCTCGTGTTGGCTCATTCCGCCAGCATCGTCTTCGCCAACTCGCGCCGG CTCGCGGAGCGACTCTGCGCCCGGCTGAACGAGCTGTACGCCGAGCGGCTCGCCGCGGCCACCGCCGCGGACGAATCCGT GGCCGGGGACGGGCCGGGGGAAGCCGGCCGGACGTCCCCCGCGGCGCTGATGGGCGCCTCGGGCCAAGGCGGCGGCACGG CGGGCTGGCCGGAGATCGCGCGGGCCCACCACGGCAGCGTGAGCCGCGAGCAACGGGCCGGAATCGAGGAGGATCTCAAG GCTGGCCGGCTGCCCGCGGTCGTCGCGACCTCCAGCCTGGAACTCGGCATCGACATGGGAGCCGTCGACCTGGTCGTGCA GATCGGGTCCCCGCCGAGCGTCGCCGCCGGGATGCAGCGCACCGGCCGCGCGGGCCACCAGGTCGGCGCCGCCAGTCGCG GCGTCATCATCCCGAAGCATCGCAGCGACCTGCTCGAATGTGCCGTGGTCGCCGAGCGGATGCGCTCGGGGGCGATCGAG CGGCTGCGGTACCCGCGCAACCCCCTCGACGTGCTGGCGCAGCAGATCGTGGCAATGACGGCGATGGAGGACTGGCACGT TGACGAGCTCGGCGCGCTGGTCCGGCGCACCGCGACGTTCGCGACGCTGCCGACCTCCGCCTTCGAGGCGGTCCTGGACA TGCTCGCCGGCCGCTACCCCTCCGACACGTTCGCCGAGCTGCGCCCCCGCATCACCTGGGACCGCGTCACCGGGATCCTC ACCGCCCGCCCGGGCGCCCAGCGGCTCGCCGTGACCAGCGGAGGCACCATTCCCGACCGGGGCATGTTCGGCGTCTTCCT CGTCGGGGAGCGCTCCAGCCGGGTCGGGGAACTCGACGAGGAGATGGTCTACGAGTCGCGGGTCGGCGACGTGGTGCTCC TCGGCTCATCCAGCTGGCGCATCGAGGAGATCACCGCCGACCGGGTCCTGGTGACGCCGGCTCCGGGACGGCCCGGCCGG CTCCCCTTCTGGCATGGCGACGCCCCAGGCCGACCCGCCGAACTCGGCCGCGCGCTCGGCGCGTTCCTGCGCGAGATCAC CAGGTTGCCGGCGCAGGCGGCGGCCGACCGCGTCCGGGCCGCCGGCCTCGACGATCGGGCCACCGCCAACCTGCTGCGCT ACCTCGACGAGCAGAAGGCTGCCGTCGGCCGTCTCCACGACGATCGGACGATCGTCGTGGAGCGTTTCCGGGACGAGATC GGCGACTGGCGCCTGGCGGTGCACTCCCCGTTCGGTGCTCCGGTGAACGCGCCCTGGGCGCTCGCCCTGGGCGCCCGGCT GCGCGAGCGGTACGGGGTCGACGTCCAGATCATGCACACCGACGACGGCATCGTCGCCCGGATCCCGGATGCCGCCGAGC CGCCCGGCGCCGATCTCGCGCTGTTCGAGCCGGACGAGATCGACGCGATCGTACGGGCGGAGATCGGGAGCAGCGCCCTG TTCGCCAGCCGGTTCCGCGAGTGCGCCGGGCGGGCCCTGCTGCTGCCCCGCCGGACCCCGGGGCGGCGGACCCCGCTGTG GCAGCAGCGCCAGCGCAGCGCAGCGCTGCTGTCCGTCGCCGCGACGTTCGCCAGCTTCCCCGTCGTGCTGGAGACCATGC GAGAGTGCCTGCAGGACGTGTTCGACGTTCCGGCGCTCGCGGAGCTGATGCGCGAGGTGTCGGCCCGCACGCTGCGGGTG GTGGAGGTGGAGACGCCGTCCCCGTCTCCGTTCGCCTCCGCCCTGCTGTTCGGCTACGTCGCCGCCTTCATGTACGACGG GGACGTACCGTTGGCCGAACGCCGGGCGCAGGTGCTGTCGCTGGACAGCTCCCTGCTGGCCGAGCTCCTCGGCGAGGCGG ACCTGCGGGAGCTGATCGATCCAGCGGCGCTCGCGCAGGTCGCCGCCCAGCTCACGCGGCTCGCCCCGGACCGCCACGCC CGCGATGTCGAGGGAGTGGCCGACCTGCTGCGAATGCTCGGTGACCTCACGACCGAGGAGGCGGTCGCCCGGGGTGCCAC CCCGGGCTGGCTCGCCGAGCTCGAACAGACCCGCCGGGCCCTGCGGGTCCGTATCGCCGGCGAGGAGCGGTGGGTCGCGA TCGAGGACGCCGGCCGGCTGCGCGACGCCCTGGGCGTACCGCTGCCGGTGGGAGTTCCCGACGCCTTCACCGAACCGGTG CGTGACCCTCTCGGCGACCTGATCTCCCGCTATGCCCGTACCCACGGACCGTTCGACACCGAGGAACCGGCCGCCCGGCT GGGGCTGGGCACGGCGGTGGTCGCCGGTGTCCTGGACGGGCTGGTCCGCAGCGGCCGCCTCGTCCGCGGTGAGCTGCATC CCGACCGCGGCGGTGAGCAGTGGTGCGACGCGGGCGTGCTGCGGGCGCTGCGACGACGCAGCCTTGCCGCCCTGCGCAAG GAGGTCGAGGCGGTGCCGCCCCGGACCCTCGGTGCCTTCCTGCCGGCCTGGCAGTCGGTCACCAGCGGACGTGGCCGGGG GGTGGACGGTGTGCTGCGCGCCGTCGAGCAGCTGCAGGGCGCGCTGATCCCGGCGAGCGCATGGGAACAGCTCGTCCTCC CGGCCCGCGTCGCCGACTACTCACCGACGATGCTCGACGAGCTGTGCTCCGCCGGCGAGGTGCACTGGGCTGGCGCCGGC GGGCTGCCCGGGGACGACGGCTGGTTGACCCTGGTCCTCGCCGACACCGCGCCCCTGCTGCTGCCTCCGCCCGACCCGGA GATCGCCTCGGGTCCGCTGCACACCGCGATTCTCGACGCGCTCACCGGCGGGGCGGCCCTGTTCTTCCGGGCGCTGTCCG ACCGGATGGGCTCGCTCGACGACACGGCGCTCGCTACCGCGCTCTGGGATCTCGTCTGGGCGGGGCGGGTAACCAACGAC ACCCTCGCCCCGCTGCGTGCCCTGCTGGGTTCCGCCGGCCGTCCGTACCGTGCCCCCCGTCCCCGGGCGGCACGGTACGG ACGGCCGGCGATGCCGCGGCGGGCCGGCCCCCCGACGGCCGCCGGCCGCTGGTCGCTGCTGCCCGAGCGGGACACCGACC CGACCCGGCGCGCCCACGCGCTGGCCGAGGCGCTGCTCGAGCGCCACGGCATCGTCACCCGCGGCGCGGTGACCGGCGAG CGGCACCCGGGCGGGTTCGCCGGGGTCTACCGGGTCCTCAGCGCCTTCGAGGACGCCGGCCGCGCCCGCCGGGGCTACTT CGTCGAGTCCCTGGGCGCGGCCCAGTTCGCCGTCCCGGGAGCGGTCGATCGGCTGCGCTCCATCGCCGCGGCACAGCGGG ACGCCGAGGCGGCCCCGGCCTGGGCGCAGCCGGCGGCCGGCCCACCGAGCTCATCGTCCGCGCAGGCCGTCGTCCTGGCC GCGGCCGATCCGGCCAACCCGTTCGGTGCCGCGCTGCCCTGGCCGACCCGACCGGGGGATGACGCGGACGGCGCCGCCGG CCACCGGCCGGGGCGCAAGGCGGGCGCGATGGTCGTCATCATCGACGGGGAACTCATCCTCTACGTGGAACGCGGGGGCC GTTCCCTGCTGTCATGGACCGAGGACGACCATCGGGTGGCCCCGGCGGTGGAGGCGTTGGCCCGCGCCGTGCGGGACGGC CTGCTCGGCAGGCTCACGGTGGAGAAGGCGGACGGCCAGACGATCGTCGGCAGCACCCTGGGTGCCGCCCTGGAGCGCGC CGGTTTCCACCCGACCCCGCGGGGCCTGCGGCTGCGGAGCATCAGTTCCGAGAGAAGGAAATAA
Upstream 100 bases:
>100_bases GATCCCCACCGGGGGTCCCCACCGGCGGAACCGCGGCCACGGGAAGCACGACCGCGGGAAGCACGACCGGGTCGAGGCCG GGCCCCACGGCGGGCCCGTC
Downstream 100 bases:
>100_bases GACGGGCACGTCCGCGGGTGAACGCTCCCTCGGCCGCCTTGAGACTGATCTCCAGATCCGCGGCCGCCTCCCGGGTACTC TTCCCGGCCGCCCGAGCCAT
Product: DEAD/DEAH box helicase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1567_residues MNHTGGRLSVPRRRLVNVPSFASPDPPDPLTAFSAPTRSWFGAAFTAATPAQRGAWEAIRTGGNALVVAPTGSGKTLAAF LWSLDTLARSAPPAEPTRRCRVLYVSPLKALAVDVERNLRAPLAGIRSAAQRLGLPQPDVTVGLRSGDTPAAERRGFGTR PPDVLITTPESLFLILTSAARESLRGVRTVIVDEVHAVAGTKRGAHLALSLERLDALLDTPAQRIGLSATVRPVEEAARF LGGTAPVAVVRPPAAKTLQIDVVVPVEDMTQLGGQLLDGSPDGSAASAPHRASIWPAVEQRVLDLVLAHSASIVFANSRR LAERLCARLNELYAERLAAATAADESVAGDGPGEAGRTSPAALMGASGQGGGTAGWPEIARAHHGSVSREQRAGIEEDLK AGRLPAVVATSSLELGIDMGAVDLVVQIGSPPSVAAGMQRTGRAGHQVGAASRGVIIPKHRSDLLECAVVAERMRSGAIE RLRYPRNPLDVLAQQIVAMTAMEDWHVDELGALVRRTATFATLPTSAFEAVLDMLAGRYPSDTFAELRPRITWDRVTGIL TARPGAQRLAVTSGGTIPDRGMFGVFLVGERSSRVGELDEEMVYESRVGDVVLLGSSSWRIEEITADRVLVTPAPGRPGR LPFWHGDAPGRPAELGRALGAFLREITRLPAQAAADRVRAAGLDDRATANLLRYLDEQKAAVGRLHDDRTIVVERFRDEI GDWRLAVHSPFGAPVNAPWALALGARLRERYGVDVQIMHTDDGIVARIPDAAEPPGADLALFEPDEIDAIVRAEIGSSAL FASRFRECAGRALLLPRRTPGRRTPLWQQRQRSAALLSVAATFASFPVVLETMRECLQDVFDVPALAELMREVSARTLRV VEVETPSPSPFASALLFGYVAAFMYDGDVPLAERRAQVLSLDSSLLAELLGEADLRELIDPAALAQVAAQLTRLAPDRHA RDVEGVADLLRMLGDLTTEEAVARGATPGWLAELEQTRRALRVRIAGEERWVAIEDAGRLRDALGVPLPVGVPDAFTEPV RDPLGDLISRYARTHGPFDTEEPAARLGLGTAVVAGVLDGLVRSGRLVRGELHPDRGGEQWCDAGVLRALRRRSLAALRK EVEAVPPRTLGAFLPAWQSVTSGRGRGVDGVLRAVEQLQGALIPASAWEQLVLPARVADYSPTMLDELCSAGEVHWAGAG GLPGDDGWLTLVLADTAPLLLPPPDPEIASGPLHTAILDALTGGAALFFRALSDRMGSLDDTALATALWDLVWAGRVTND TLAPLRALLGSAGRPYRAPRPRAARYGRPAMPRRAGPPTAAGRWSLLPERDTDPTRRAHALAEALLERHGIVTRGAVTGE RHPGGFAGVYRVLSAFEDAGRARRGYFVESLGAAQFAVPGAVDRLRSIAAAQRDAEAAPAWAQPAAGPPSSSSAQAVVLA AADPANPFGAALPWPTRPGDDADGAAGHRPGRKAGAMVVIIDGELILYVERGGRSLLSWTEDDHRVAPAVEALARAVRDG LLGRLTVEKADGQTIVGSTLGAALERAGFHPTPRGLRLRSISSERRK
Sequences:
NA
Specific function: NA
COG id: COG1201
COG function: function code R; Lhr-like helicases
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA