Definition Frankia sp. CcI3 chromosome, complete genome.
Accession NC_007777
Length 5,433,628

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Identifier: 86741288

GI number:

Start: 3064426

End: 3066210

Strand: Reverse

Name: Not Available

Synonym: Francci3_2597

Alternate gene names: NA

Gene position: NA

Preceding gene: 86741289

Following gene: 86741285

Centisome position: NA

GC content: NA

Gene sequence:

>1785_bases
ATGAACCCGACGCCGCAGCCCGATGGTCAGGTACGCAGCGACATCTGCGGGCCTCGGCCCGGCCTGCCGGACCCGCGGGC
ACTCGCCCGGTGGGAAGAGGCGCTGCTGTGTCTGCGGGTGTTCGACACGGCGCCGATCATATTCGCGGTCTTCGACCGCG
GCCTGCGCTACCGGGCGGTGAACCAGGCGGCTGCCAGGGCCTCCGGCCTGTCCGCCGAGGAGATGATCGGTGGGTATGGC
CCGGAGGTGCTCCCGGGCATAGACCCTCTCGGCTGGGAGCGGCCCCGCCGGGTGTTGGCGACCGGTGAGGCGATCCTCGA
CGAGGAGATCATCGGAGCGACCCCGGCGGACCCGTCGAATCCGCGCATCTGGCGGGCCTCCTACTATCCCCTGCATGACT
CGACCGGGGCCAGAATCGCGGTCGGCGTGACGGCGGTGGACGTGACCGACGAGCGTCGCGCGCAGGCCGAACGTGACCTG
GTACTGCGGCGGTTGCGGCTGCTGAGCCGGGCGAGCGGGCTGCTCGGCGCGTCGCTGGACCTGTCGGCCACCTTGCGGGA
GATGGTCACGCTGGTCGTCCCGGAATTCGCCGACGCCTGCGAGCTGTACCTCGCCGACGAGCCCTGCCCCCCGGGGGCCG
AACCCGACCCGCCGCTGCTTCGCCGAGCCGTGTGGGCACACTCCCCCGACCTGCCCCGACCATCCCCCGACCTGCCCCTC
CCCCCACCAGACACAAGAAGCAACCTGACCGGACGCCAGGTCGGACGGGTATTCCTCACCCGCCAACCGGTCCGCCTCGA
CCTGGACGAACGGCTCCCCGACGCACCCGACGCACCCGACGCACCCGCGAGCAGCGTGGCCGCCCTGTTCCGGCATTCCC
ACCTTCGATCCGCGATCATCGTCCCGCTGCTGGTCGGCCCGCACTGCCTGGGAACCGTCGGGTTCGCCGTCACCGCGGCC
CGCCCCTACCGCGAGCAGGACACCCAGACCGCCACCGAACTGGGCAGCCGGATCGCAACCGCGATCGCGAACGCCCACGC
CTTCGACCACCAGCGGACCGCCGCCCTGACCCTGCAACGCGCCCTGCTGCCCCGCGACATCCCCACCCTGGACGACCTCG
ACCTGGCCTGGCGCTACCAGCCCGGCACCAGCGGCACCGAGGTCGGCGGCGACTGGTTCGACGTCATCCCCCTGCCGGCC
GGACGGGTCGCGCTGGTCATCGGCGACGTCATGGGCCGCGGCCTGAACGCCGCCGCCGCCATGGGCCAGCTACGCACCGC
CGCCCGCACCCTCGCCCGCCTCGACCTGCCCCCCGCCGCCCTGCTGACCGAACTCGACGCCGTCACCCGCAGCATCGACA
CCATCGCCAGCGTCGCCTACGTCATCCAGGACCCGGCCACCAGCACCCTGACCGTGGCCAACGGCGGCCACCTCCCCCCC
GCCCTGCGCCACCCCGACGGCACCGCCGACCTCCTCGACGACCCCCACGGGATCATCCTCGGCGTCACCGAACAGACCTT
CACCGAAACCCGCCACCGCTTCCCCCCCGGCTCCACCCTCGCCCTCTACACCGACGGCCTCGTCGAATCCCCCACCGTCG
ACATCGGCGAGGGCTGCCGACGCCTGCTGCGCATCCTCACCGAAACAGCCGACCTGCCCACCACCGCGGACCGGCTACTG
ACCCTCCTCAACCGCAACGACGGCAACGACGGCTACGACGACGACGTCACCCTCCTCCTCGCCCACGCCCGGCGGGGTCG
GTGCGGCCGGTTCAGGGGGCGGTGA

Upstream 100 bases:

>100_bases
AGCGCAGGTGGTGGGATTGTCCCACACTTGGATGCGTCTCTACCCGCCCGAGTCTCCGACGGTGACCGGCGGCTCCGGCC
CCGGCAGGACTGGTCCCGAG

Downstream 100 bases:

>100_bases
ATGCCAGGGAGACGTTGTGCCCACCGAAGCCGAAGGCGTTGGCCACGGCGGCGCGGACGGTCTCGTGGCGGGCCGGTCCG
GACACGACGTCGAGCTTGAT

Product: putative PAS/PAC sensor protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>594_residues
MNPTPQPDGQVRSDICGPRPGLPDPRALARWEEALLCLRVFDTAPIIFAVFDRGLRYRAVNQAAARASGLSAEEMIGGYG
PEVLPGIDPLGWERPRRVLATGEAILDEEIIGATPADPSNPRIWRASYYPLHDSTGARIAVGVTAVDVTDERRAQAERDL
VLRRLRLLSRASGLLGASLDLSATLREMVTLVVPEFADACELYLADEPCPPGAEPDPPLLRRAVWAHSPDLPRPSPDLPL
PPPDTRSNLTGRQVGRVFLTRQPVRLDLDERLPDAPDAPDAPASSVAALFRHSHLRSAIIVPLLVGPHCLGTVGFAVTAA
RPYREQDTQTATELGSRIATAIANAHAFDHQRTAALTLQRALLPRDIPTLDDLDLAWRYQPGTSGTEVGGDWFDVIPLPA
GRVALVIGDVMGRGLNAAAAMGQLRTAARTLARLDLPPAALLTELDAVTRSIDTIASVAYVIQDPATSTLTVANGGHLPP
ALRHPDGTADLLDDPHGIILGVTEQTFTETRHRFPPGSTLALYTDGLVESPTVDIGEGCRRLLRILTETADLPTTADRLL
TLLNRNDGNDGYDDDVTLLLAHARRGRCGRFRGR

Sequences:
NA

Specific function: NA

COG id: COG2208

COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA