Definition Frankia sp. CcI3 chromosome, complete genome.
Accession NC_007777
Length 5,433,628

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 86740132

GI number:

Start: 1719111

End: 1720052

Strand: Direct

Name: Not Available

Synonym: Francci3_1426

Alternate gene names: NA

Gene position: NA

Preceding gene: 86740131

Following gene: 86740133

Centisome position: NA

GC content: NA

Gene sequence:

>942_bases
GTGACCATCACGGGCGGTGACCTGCGGTCCCTGCCGGTCCCGGACGGGCTCGACGGCGTCCGTCTCGACGCGGCGATCGC
GAGGATGTTCGGGCTGTCGCGGACCGTGGCCGCCGCGCTCGTCGACGACGGCCAGGCGAGCCTCGACGGGAAGGTCCGGG
GCCGGTCCGACCGGGTCAGCGGCGGTGCCTGGCTGGAGGTCCGGCTGCCCGCTCCGCCGCGTCCGGTGGCGGTGGAACCC
ACGCCGGTCGAGGCTCTCGGCATTCTCTACGACGACGACGACATCATCGTGGTGGACAAGCCGGTCGGGGTCGCCGTCCA
TCCGGCGCCCGGCTTCACCGGACCGACCGTGATCGGGGCGTTGGCCGCCGCGGGATACCGCATTTCCACCTCGGGCGCGG
CCGAGCGTCAGGGGGTGGTGCACCGTCTCGACGTCGGTACCACCGGGGTGATGGTGGTCGCCAAGAGCGAGCGCGCATAT
ACCCTGCTGAAACGGGCGTTTCGTGACCGTACGGTGGACAAGCGCTACCGGGCCGTGGTGCAGGGCCATCCCGATCCGCT
GCGGGGCACCGTGGACGCCCCGATCGACCGGCATCCGCGCCGGCCGGGGCTGTTCGCCGTCGTCGCGGACGGCAAGCCGA
GTATCACCCACTACGACCTCCAGGAGGCGTTCCGGGCCGCCTCCCTGCTGTCCGTGCGATTGGAGACCGGGCGCACCCAC
CAGATCCGGGTGCACATGTCCGCCCTGCGGCACCCGTGTGTCGGGGATCTCGCCTACGGGGCCGATCCCACGCTCGCCGA
GCGGCTCGGCCTGACCCGCCAGTGGCTGCACGCGGCGCGGCTGTCCTTCGATCATCCCGGTCACGGCGGACGGGTCGAGT
TCACCAGTCCGGACCCGGCTGACCTGGCCGAGGCGGTGGAACGGCTGCGGGACCAGCCATGA

Upstream 100 bases:

>100_bases
GCGATCGTCTGCGGCGGCGTGCTCGCGGTCATCCTGTCCCTGCGCGGCGTGGGTCTGGACGGCACGCGCTACGCCGAGCA
TCATCCCCCCGGCGGGGGCA

Downstream 100 bases:

>100_bases
CGGAGCCGGCGACGCTCGGGGAGGCGACCTCGGCGCCGGTGCCCGCTCCCGCGGCACCCGGGGGAGCGGTGCCGGCCCCG
GCCCCCGCCTGCCGGGGGTG

Product: ribosomal large subunit pseudouridine synthase D

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>313_residues
MTITGGDLRSLPVPDGLDGVRLDAAIARMFGLSRTVAAALVDDGQASLDGKVRGRSDRVSGGAWLEVRLPAPPRPVAVEP
TPVEALGILYDDDDIIVVDKPVGVAVHPAPGFTGPTVIGALAAAGYRISTSGAAERQGVVHRLDVGTTGVMVVAKSERAY
TLLKRAFRDRTVDKRYRAVVQGHPDPLRGTVDAPIDRHPRRPGLFAVVADGKPSITHYDLQEAFRAASLLSVRLETGRTH
QIRVHMSALRHPCVGDLAYGADPTLAERLGLTRQWLHAARLSFDHPGHGGRVEFTSPDPADLAEAVERLRDQP

Sequences:
NA

Specific function: NA

COG id: COG0564

COG function: function code J; Pseudouridylate synthases, 23S RNA-specific

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA