| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is pgl [H]
Identifier: 86610305
GI number: 86610305
Start: 2984791
End: 2985522
Strand: Direct
Name: pgl [H]
Synonym: CYB_2885
Alternate gene names: 86610305
Gene position: 2984791-2985522 (Clockwise)
Preceding gene: 86610304
Following gene: 86610310
Centisome position: 97.97
GC content: 61.89
Gene sequence:
>732_bases ATGCAGGGATTCCAGTTGGAGATCTTTCCGGAGGGCCCCGTCTTAATCCAACGGGCCATCGAGATTTGGCAAGCTCGGTC AGCCGCTGCCATTCGCGAGCGGGGACGCTTTACGGTGGCCTTGGCGGGAGGGAGCACCCCCAAGAAGCTGTATGCTGCCC TGGCCCAAACCCCAGGGATCCCTTGGCAACAAACCTGGCTGTTCTGGGGGGATGAGCGCTATGTTCCCCCGGATCACCCT GAAAGCAACTACCGCATGGTACGAGAAACCCTGCTGCAGCAGATCGGGATCCCGGCAGCTCAAGTTTTCCCCATGCCTAC CCAAGCGGGGGATCCCCTTCGCGATGCTGCCGAATACGAGGCCACCCTACGGCAGATTTTCGGTGCAGAGTGCCCTTCTC TCGACCTGGTATGGCTGGGGGTGGGGGAAGACGGCCACACAGCTTCTCTATTTCCCGACACCGCCGCTCTGCAGGTGCAG CACCGCTGGGTGACGGTGGGGCAAAAAGGGCAGGAGCCGCGTCTAACCTTGACCTATCCTGTTCTGAACCAAGCAGCCCA GGTGGTGTTCCTGGTAACCGGAGCGAACAAAGCCCCCATCGTGAAAGAGGCGCTGACCACCGAGGCCCACCTACCCTGCC AGCGCGTAAACCCCAGAGGACGGCTGCTGTGGTTGCTGGATGCGGCGGCAGCAGCTCAACTGCCCCTGCCCTGTGTCCCG CTGCTCAGCTAA
Upstream 100 bases:
>100_bases CGGTGGCTTCCTAGTGTTTGCCCCGCTTAGGGGATCCCTTCGGTAAAGTGTTGGTGCAGGTCGGCTGACCCAGCATAGGT CGGCAGTAGGGCTTCGGTGT
Downstream 100 bases:
>100_bases ACAACAGGCGGGCTAACTGCCGATGGGATAGGATCCCCAGGCCCACCGCCCCCAAAATCATCCCAGCCCATTCCAGTGGC CACAGGTTTGATAGCCCCAG
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MQGFQLEIFPEGPVLIQRAIEIWQARSAAAIRERGRFTVALAGGSTPKKLYAALAQTPGIPWQQTWLFWGDERYVPPDHP ESNYRMVRETLLQQIGIPAAQVFPMPTQAGDPLRDAAEYEATLRQIFGAECPSLDLVWLGVGEDGHTASLFPDTAALQVQ HRWVTVGQKGQEPRLTLTYPVLNQAAQVVFLVTGANKAPIVKEALTTEAHLPCQRVNPRGRLLWLLDAAAAAQLPLPCVP LLS
Sequences:
>Translated_243_residues MQGFQLEIFPEGPVLIQRAIEIWQARSAAAIRERGRFTVALAGGSTPKKLYAALAQTPGIPWQQTWLFWGDERYVPPDHP ESNYRMVRETLLQQIGIPAAQVFPMPTQAGDPLRDAAEYEATLRQIFGAECPSLDLVWLGVGEDGHTASLFPDTAALQVQ HRWVTVGQKGQEPRLTLTYPVLNQAAQVVFLVTGANKAPIVKEALTTEAHLPCQRVNPRGRLLWLLDAAAAAQLPLPCVP LLS >Mature_243_residues MQGFQLEIFPEGPVLIQRAIEIWQARSAAAIRERGRFTVALAGGSTPKKLYAALAQTPGIPWQQTWLFWGDERYVPPDHP ESNYRMVRETLLQQIGIPAAQVFPMPTQAGDPLRDAAEYEATLRQIFGAECPSLDLVWLGVGEDGHTASLFPDTAALQVQ HRWVTVGQKGQEPRLTLTYPVLNQAAQVVFLVTGANKAPIVKEALTTEAHLPCQRVNPRGRLLWLLDAAAAAQLPLPCVP LLS
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
Organism=Homo sapiens, GI6912586, Length=216, Percent_Identity=41.2037037037037, Blast_Score=125, Evalue=4e-29, Organism=Homo sapiens, GI52145310, Length=229, Percent_Identity=36.2445414847162, Blast_Score=110, Evalue=8e-25, Organism=Caenorhabditis elegans, GI115533058, Length=217, Percent_Identity=31.3364055299539, Blast_Score=94, Evalue=8e-20, Organism=Caenorhabditis elegans, GI115533060, Length=217, Percent_Identity=31.3364055299539, Blast_Score=94, Evalue=9e-20, Organism=Saccharomyces cerevisiae, GI6321687, Length=253, Percent_Identity=31.2252964426877, Blast_Score=102, Evalue=5e-23, Organism=Saccharomyces cerevisiae, GI6319918, Length=212, Percent_Identity=33.9622641509434, Blast_Score=97, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6324362, Length=211, Percent_Identity=32.2274881516588, Blast_Score=96, Evalue=4e-21, Organism=Saccharomyces cerevisiae, GI6321957, Length=227, Percent_Identity=29.0748898678414, Blast_Score=89, Evalue=7e-19, Organism=Drosophila melanogaster, GI24641119, Length=227, Percent_Identity=34.3612334801762, Blast_Score=104, Evalue=5e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 - InterPro: IPR006148 [H]
Pfam domain/function: PF01182 Glucosamine_iso [H]
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 26745; Mature: 26745
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGFQLEIFPEGPVLIQRAIEIWQARSAAAIRERGRFTVALAGGSTPKKLYAALAQTPGI CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCC PWQQTWLFWGDERYVPPDHPESNYRMVRETLLQQIGIPAAQVFPMPTQAGDPLRDAAEYE CCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHEECCCCCCCCCHHHHHHHH ATLRQIFGAECPSLDLVWLGVGEDGHTASLFPDTAALQVQHRWVTVGQKGQEPRLTLTYP HHHHHHHCCCCCCCEEEEEEECCCCCEEEECCCCEEEEEEEEEEEECCCCCCCEEEEEHH VLNQAAQVVFLVTGANKAPIVKEALTTEAHLPCQRVNPRGRLLWLLDAAAAAQLPLPCVP HHHCCCEEEEEEECCCCCCHHHHHHHHHHCCCHHHCCCCCCEEEEEECHHHHCCCCCCCC LLS CCC >Mature Secondary Structure MQGFQLEIFPEGPVLIQRAIEIWQARSAAAIRERGRFTVALAGGSTPKKLYAALAQTPGI CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCC PWQQTWLFWGDERYVPPDHPESNYRMVRETLLQQIGIPAAQVFPMPTQAGDPLRDAAEYE CCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHEECCCCCCCCCHHHHHHHH ATLRQIFGAECPSLDLVWLGVGEDGHTASLFPDTAALQVQHRWVTVGQKGQEPRLTLTYP HHHHHHHCCCCCCCEEEEEEECCCCCEEEECCCCEEEEEEEEEEEECCCCCCCEEEEEHH VLNQAAQVVFLVTGANKAPIVKEALTTEAHLPCQRVNPRGRLLWLLDAAAAAQLPLPCVP HHHCCCEEEEEEECCCCCCHHHHHHHHHHCCCHHHCCCCCCEEEEEECHHHHCCCCCCCC LLS CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]