| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is phhB
Identifier: 86610294
GI number: 86610294
Start: 2970147
End: 2970437
Strand: Direct
Name: phhB
Synonym: CYB_2873
Alternate gene names: NA
Gene position: 2970147-2970437 (Clockwise)
Preceding gene: 86610293
Following gene: 86610295
Centisome position: 97.49
GC content: 58.08
Gene sequence:
>291_bases ATGTCCAGACCCGTCAAGCTAAGTGAAGCCGAGATCCAGGCCAAGCTGGAGAAACTGCCGGGCTGGTCTTTGCGGGAGGG AAAGCTGCATCGCCAATTTCAGTTTGGTTCCTTTGTCGAAGCCTTTGGCTGGATGAGCAGTGTGGCCTTGGTGGCCGAAA GCATGGGGCACCACCCCGAATGGAGCAATGTCTACAACCGCGTGCGGGTGGATCTCACCACCCACGATGCCGGGGGCATT ACAGAACTGGACTTTACCCTGGCGCAACGCATGAACGAGCTGGCCAGCTAG
Upstream 100 bases:
>100_bases CAAAGGTCATGAAGTTTTGTGAATAAGCCGGGATCCGCTCTCAGTTGCTCCTTTGATGAAAGCGTGATGAAAACGATGGC ATCGACCGGAGGGAACGCCC
Downstream 100 bases:
>100_bases ACGCTTCAGTACCCAACTTTGGGGATCCCTCAAAGCCGGCTTGGCAGAGGATCCCCATTGGTTTGTTGCTGCCTCTAAGG TTGTGTCGGGAGTTGCGCTG
Product: pterin-4-alpha-carbinolamine dehydratase
Products: NA
Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD [H]
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MSRPVKLSEAEIQAKLEKLPGWSLREGKLHRQFQFGSFVEAFGWMSSVALVAESMGHHPEWSNVYNRVRVDLTTHDAGGI TELDFTLAQRMNELAS
Sequences:
>Translated_96_residues MSRPVKLSEAEIQAKLEKLPGWSLREGKLHRQFQFGSFVEAFGWMSSVALVAESMGHHPEWSNVYNRVRVDLTTHDAGGI TELDFTLAQRMNELAS >Mature_95_residues SRPVKLSEAEIQAKLEKLPGWSLREGKLHRQFQFGSFVEAFGWMSSVALVAESMGHHPEWSNVYNRVRVDLTTHDAGGIT ELDFTLAQRMNELAS
Specific function: Unknown
COG id: COG2154
COG function: function code H; Pterin-4a-carbinolamine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI134133240, Length=92, Percent_Identity=47.8260869565217, Blast_Score=83, Evalue=6e-17, Organism=Homo sapiens, GI4557831, Length=77, Percent_Identity=46.7532467532467, Blast_Score=80, Evalue=3e-16, Organism=Caenorhabditis elegans, GI115533705, Length=86, Percent_Identity=48.8372093023256, Blast_Score=85, Evalue=6e-18, Organism=Drosophila melanogaster, GI45549100, Length=96, Percent_Identity=43.75, Blast_Score=86, Evalue=7e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001533 [H]
Pfam domain/function: PF01329 Pterin_4a [H]
EC number: =4.2.1.96 [H]
Molecular weight: Translated: 10860; Mature: 10729
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPVKLSEAEIQAKLEKLPGWSLREGKLHRQFQFGSFVEAFGWMSSVALVAESMGHHPE CCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC WSNVYNRVRVDLTTHDAGGITELDFTLAQRMNELAS HHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SRPVKLSEAEIQAKLEKLPGWSLREGKLHRQFQFGSFVEAFGWMSSVALVAESMGHHPE CCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC WSNVYNRVRVDLTTHDAGGITELDFTLAQRMNELAS HHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]