BacMap

Definition	Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession	NC_007776
Length	3,046,682

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The map label for this gene is hflB [C]

Identifier: 86610266

GI number: 86610266

Start: 2940111

End: 2941997

Strand: Direct

Name: hflB [C]

Synonym: CYB_2845

Alternate gene names: 86610266

Gene position: 2940111-2941997 (Clockwise)

Preceding gene: 90296806

Following gene: 86610268

Centisome position: 96.5

GC content: 64.97

Gene sequence:

>1887_bases
ATGGCCAATTTAAGTGACTTTGTACAGGGCATTGAGCAGTTGATCGAGCTGGCTCAGAAGCTGGACGAGAAAAAGCAAAG
TGGAGAGCTGCGAACCGAAGTCCGCATCCAGGCCCGTCCTCTGGGCAGTTCTATTCCCCCTTCCGGCTCCATCCCCCGCC
GCCGCAGCCCTGCCCAAACGGGGGATCCCCCCTGGAGCAGCGAGCCCCAAGTGATGTCTGCGGTTCGCTTCCAGGAACCG
TCCAAGGCCGCTGTGCCCGACCCGCCAGCAACTTCTGCCGACCGCCCAGAGTCTTGGGCTGGGCCACGCCTCAAGGATGT
GGGGGGACTGAGGGAACAGCTCCAAGCGCTGCGGGAGATGGTGGAGATCCCCCTCAAGCGGCCCGATCTGCTGGCCAAGC
TGGGGTTGGATCCGCCCCGCGGCGTGTTGTTGGTAGGCCCCCCCGGCACCGGCAAAACCCTGACGGCCCGCGCCCTGGCC
GAGAGCCTGGGGGTGAACTACATCGCCATTGTCGGCCCGGAGCTGATCGGCAAGTACTACGGCGAGGCGGAGGCGCGCCT
GCGGCAACTGTTTGAAAAGGCAGCCAAATCGGCTCCCTGTCTGGTGTTTATTGACGAAATCGATGCCCTAGTGCCCAACC
GCGCCACCGTCGAGGGGGAGGTGGAAAAACGCCTGGTGGCCCAGATGCTGGGGCTGATGGACGGGTTTGTGGCCCAAAAG
GGGATCGTGGTGCTGGCAGCCACCAACCGGCCCGAGGCTCTGGATCCGGCTCTGCGGCGACCGGGGCGCTTTGATCGGGA
GGTGATCTTCAAGGTGCCGGACCGGGAGGGGCGGCGGGAGATCCTGGCCATCCACACCCGCGGCATGCCCTTGGCGGAGG
ATGTGGATCTGGACAGCCTGGCGGATCAGACGCTGGGCTTTGTGGGGGCAGATCTGCGGGGCCTGTGCCAGGCAGCAGCC
TATGCGGCTTTGCGGCGGCAGGTGCCCGATTTGGGATCCCCCATCCCCGAGTCCCTGACGGTAACCGCAGCGGATTTTCA
ACAGGCTCTGCAACAGGTGAAGCCGGCGGTGCTGCGCTCGGTGGAGATTGAATCCCCGCAGGTGAGCTGGGATCAAATTG
GCGGCCTGGAGCACGCCAAGCAGATTTTGCAAGAGGCCATCGAGGGATCCCTGCTGCACCCTGAGTTGTACGAGCAGGCT
CAGGCCCAAGCGCCCAAGGGCATCCTCCTCAGCGGCCCCCCTGGCACTGGCAAAACCCTGTTGGCCAAAGCCATCGCTTC
CCAGGCCAAGGCTAACTTCATTGCCGTCTCCGGCCCGGAGCTCTTGAGCAAATGGGTGGGATCCTCCGAGCAGGCGGTAC
GGGAACTTTTTGCCCGCGCCCGCCAATGCGCCCCCTGTGTCATCTTCATCGACGAGATCGACACCCTTGCCCCGGCGCGG
GGAAGCTACTCCGGGGATAGTGGGGTCAGCGACCGCGTTCTGGGGCAGCTGCTGGCAGAGCTGGATGGGATCCGCCCCAG
CCAAGGGGTATTGGTGGTGGCCGCCACCAACCGCAAGGCCAGTTTGGATCCCGCCCTCACCCGGGCCGGCAGGTTGGAGC
TGCACCTGAGCGTGGAGCTGCCGGATCGCAGCGGGCGACGGGAAATTTTGGCCGTTCACAACCGCAAGCGTCCCCTGGGG
CCTGATGTGGACTTACAGGGGTGGGCCGAGCAGACCGAAGGTTGGAGTGGTGCCGACCTGGCCCTGCTCAGCAACCGCGC
CGCCATTGCCGCCATCCGCCGCCACCGCGCCACTTCCGAGACGGTGGATGCCAAAACCCTGGTCATCCAACAGGAAGACT
TCTGTCGAGCCTTTGCCGAGCTGCAGCAGCAACGCCAAGCCGGCTGA

Upstream 100 bases:

>100_bases
CCGTGGAACTCTCCTCACCTGAGCTGGCCAGGCAGGGGATGAGTTAGCACCTCTGGCGGGTCAATTTGCAGATAACTTGT
GTGGATGGAAAATCCCGGCT

Downstream 100 bases:

>100_bases
TCCCAGCCTGAGGGCTATTCCCATCACGCCAGCGGTTCGGAGCACCTTCAAACTTTCAAAATCAAAAGACTGGGATCCCT
TGCCATTCTGGTTGGCTGTG

Product: AAA family ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 628; Mature: 627

Protein sequence:

>628_residues
MANLSDFVQGIEQLIELAQKLDEKKQSGELRTEVRIQARPLGSSIPPSGSIPRRRSPAQTGDPPWSSEPQVMSAVRFQEP
SKAAVPDPPATSADRPESWAGPRLKDVGGLREQLQALREMVEIPLKRPDLLAKLGLDPPRGVLLVGPPGTGKTLTARALA
ESLGVNYIAIVGPELIGKYYGEAEARLRQLFEKAAKSAPCLVFIDEIDALVPNRATVEGEVEKRLVAQMLGLMDGFVAQK
GIVVLAATNRPEALDPALRRPGRFDREVIFKVPDREGRREILAIHTRGMPLAEDVDLDSLADQTLGFVGADLRGLCQAAA
YAALRRQVPDLGSPIPESLTVTAADFQQALQQVKPAVLRSVEIESPQVSWDQIGGLEHAKQILQEAIEGSLLHPELYEQA
QAQAPKGILLSGPPGTGKTLLAKAIASQAKANFIAVSGPELLSKWVGSSEQAVRELFARARQCAPCVIFIDEIDTLAPAR
GSYSGDSGVSDRVLGQLLAELDGIRPSQGVLVVAATNRKASLDPALTRAGRLELHLSVELPDRSGRREILAVHNRKRPLG
PDVDLQGWAEQTEGWSGADLALLSNRAAIAAIRRHRATSETVDAKTLVIQQEDFCRAFAELQQQRQAG

Sequences:

>Translated_628_residues
MANLSDFVQGIEQLIELAQKLDEKKQSGELRTEVRIQARPLGSSIPPSGSIPRRRSPAQTGDPPWSSEPQVMSAVRFQEP
SKAAVPDPPATSADRPESWAGPRLKDVGGLREQLQALREMVEIPLKRPDLLAKLGLDPPRGVLLVGPPGTGKTLTARALA
ESLGVNYIAIVGPELIGKYYGEAEARLRQLFEKAAKSAPCLVFIDEIDALVPNRATVEGEVEKRLVAQMLGLMDGFVAQK
GIVVLAATNRPEALDPALRRPGRFDREVIFKVPDREGRREILAIHTRGMPLAEDVDLDSLADQTLGFVGADLRGLCQAAA
YAALRRQVPDLGSPIPESLTVTAADFQQALQQVKPAVLRSVEIESPQVSWDQIGGLEHAKQILQEAIEGSLLHPELYEQA
QAQAPKGILLSGPPGTGKTLLAKAIASQAKANFIAVSGPELLSKWVGSSEQAVRELFARARQCAPCVIFIDEIDTLAPAR
GSYSGDSGVSDRVLGQLLAELDGIRPSQGVLVVAATNRKASLDPALTRAGRLELHLSVELPDRSGRREILAVHNRKRPLG
PDVDLQGWAEQTEGWSGADLALLSNRAAIAAIRRHRATSETVDAKTLVIQQEDFCRAFAELQQQRQAG
>Mature_627_residues
ANLSDFVQGIEQLIELAQKLDEKKQSGELRTEVRIQARPLGSSIPPSGSIPRRRSPAQTGDPPWSSEPQVMSAVRFQEPS
KAAVPDPPATSADRPESWAGPRLKDVGGLREQLQALREMVEIPLKRPDLLAKLGLDPPRGVLLVGPPGTGKTLTARALAE
SLGVNYIAIVGPELIGKYYGEAEARLRQLFEKAAKSAPCLVFIDEIDALVPNRATVEGEVEKRLVAQMLGLMDGFVAQKG
IVVLAATNRPEALDPALRRPGRFDREVIFKVPDREGRREILAIHTRGMPLAEDVDLDSLADQTLGFVGADLRGLCQAAAY
AALRRQVPDLGSPIPESLTVTAADFQQALQQVKPAVLRSVEIESPQVSWDQIGGLEHAKQILQEAIEGSLLHPELYEQAQ
AQAPKGILLSGPPGTGKTLLAKAIASQAKANFIAVSGPELLSKWVGSSEQAVRELFARARQCAPCVIFIDEIDTLAPARG
SYSGDSGVSDRVLGQLLAELDGIRPSQGVLVVAATNRKASLDPALTRAGRLELHLSVELPDRSGRREILAVHNRKRPLGP
DVDLQGWAEQTEGWSGADLALLSNRAAIAAIRRHRATSETVDAKTLVIQQEDFCRAFAELQQQRQAG

Specific function: Seems To Act As An ATP-Dependent Zinc Metallopeptidase. Involved In The Degradation Of Sigma-32. Degrades Carboxy- Terminal-Tagged Cytoplasmic Proteins. These Proteins Are Tagged With An 11-Amino-Acid Nonpolar Destabilizing Tail VIa A Mechanism Involving

COG id: COG0464

COG function: function code O; ATPases of the AAA+ class

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AAA ATPase family. CDC48 subfamily [H]

Homologues:

Organism=Homo sapiens, GI6005942, Length=538, Percent_Identity=47.2118959107807, Blast_Score=493, Evalue=1e-139,
Organism=Homo sapiens, GI157671927, Length=523, Percent_Identity=45.8891013384321, Blast_Score=455, Evalue=1e-128,
Organism=Homo sapiens, GI45643123, Length=577, Percent_Identity=39.5147313691508, Blast_Score=387, Evalue=1e-107,
Organism=Homo sapiens, GI45643125, Length=577, Percent_Identity=39.6880415944541, Blast_Score=387, Evalue=1e-107,
Organism=Homo sapiens, GI229577436, Length=560, Percent_Identity=40.3571428571429, Blast_Score=364, Evalue=1e-100,
Organism=Homo sapiens, GI4505725, Length=473, Percent_Identity=37.6321353065539, Blast_Score=273, Evalue=3e-73,
Organism=Homo sapiens, GI194018488, Length=500, Percent_Identity=36.2, Blast_Score=249, Evalue=6e-66,
Organism=Homo sapiens, GI24497618, Length=271, Percent_Identity=43.5424354243542, Blast_Score=236, Evalue=6e-62,
Organism=Homo sapiens, GI153792536, Length=271, Percent_Identity=42.8044280442804, Blast_Score=231, Evalue=2e-60,
Organism=Homo sapiens, GI4506209, Length=224, Percent_Identity=45.9821428571429, Blast_Score=202, Evalue=7e-52,
Organism=Homo sapiens, GI24430151, Length=251, Percent_Identity=42.2310756972112, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI195539395, Length=252, Percent_Identity=38.4920634920635, Blast_Score=194, Evalue=3e-49,
Organism=Homo sapiens, GI89064750, Length=266, Percent_Identity=38.3458646616541, Blast_Score=191, Evalue=2e-48,
Organism=Homo sapiens, GI5729991, Length=266, Percent_Identity=38.3458646616541, Blast_Score=191, Evalue=2e-48,
Organism=Homo sapiens, GI24430155, Length=266, Percent_Identity=38.3458646616541, Blast_Score=191, Evalue=2e-48,
Organism=Homo sapiens, GI24497435, Length=253, Percent_Identity=41.1067193675889, Blast_Score=190, Evalue=4e-48,
Organism=Homo sapiens, GI21361144, Length=274, Percent_Identity=38.6861313868613, Blast_Score=187, Evalue=3e-47,
Organism=Homo sapiens, GI156564401, Length=374, Percent_Identity=34.2245989304813, Blast_Score=186, Evalue=6e-47,
Organism=Homo sapiens, GI5901990, Length=266, Percent_Identity=40.6015037593985, Blast_Score=179, Evalue=8e-45,
Organism=Homo sapiens, GI300192933, Length=302, Percent_Identity=37.4172185430464, Blast_Score=178, Evalue=2e-44,
Organism=Homo sapiens, GI14149767, Length=351, Percent_Identity=35.6125356125356, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI62177112, Length=351, Percent_Identity=35.6125356125356, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI21327685, Length=250, Percent_Identity=41.2, Blast_Score=175, Evalue=9e-44,
Organism=Homo sapiens, GI7657689, Length=250, Percent_Identity=41.2, Blast_Score=175, Evalue=1e-43,
Organism=Homo sapiens, GI4507173, Length=303, Percent_Identity=35.973597359736, Blast_Score=170, Evalue=4e-42,
Organism=Homo sapiens, GI310125280, Length=261, Percent_Identity=38.6973180076628, Blast_Score=165, Evalue=1e-40,
Organism=Homo sapiens, GI310125282, Length=261, Percent_Identity=38.6973180076628, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI226371754, Length=253, Percent_Identity=36.7588932806324, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI31742536, Length=271, Percent_Identity=38.0073800738007, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI112789543, Length=271, Percent_Identity=38.0073800738007, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI7019569, Length=247, Percent_Identity=35.2226720647773, Blast_Score=157, Evalue=3e-38,
Organism=Homo sapiens, GI17865802, Length=239, Percent_Identity=35.9832635983264, Blast_Score=147, Evalue=4e-35,
Organism=Homo sapiens, GI11875211, Length=253, Percent_Identity=38.3399209486166, Blast_Score=144, Evalue=2e-34,
Organism=Homo sapiens, GI40806170, Length=253, Percent_Identity=38.3399209486166, Blast_Score=144, Evalue=2e-34,
Organism=Homo sapiens, GI31377644, Length=229, Percent_Identity=36.6812227074236, Blast_Score=144, Evalue=3e-34,
Organism=Homo sapiens, GI64084766, Length=276, Percent_Identity=31.5217391304348, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI40806173, Length=170, Percent_Identity=41.1764705882353, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI116292174, Length=288, Percent_Identity=34.375, Blast_Score=99, Evalue=2e-20,
Organism=Homo sapiens, GI75677353, Length=149, Percent_Identity=35.5704697986577, Blast_Score=74, Evalue=6e-13,
Organism=Homo sapiens, GI283436220, Length=149, Percent_Identity=32.8859060402685, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI283436222, Length=149, Percent_Identity=32.8859060402685, Blast_Score=70, Evalue=7e-12,
Organism=Homo sapiens, GI283436224, Length=149, Percent_Identity=32.8859060402685, Blast_Score=69, Evalue=9e-12,
Organism=Escherichia coli, GI1789568, Length=238, Percent_Identity=43.2773109243698, Blast_Score=196, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI17532375, Length=496, Percent_Identity=47.9838709677419, Blast_Score=486, Evalue=1e-137,
Organism=Caenorhabditis elegans, GI17531535, Length=544, Percent_Identity=45.2205882352941, Blast_Score=473, Evalue=1e-133,
Organism=Caenorhabditis elegans, GI17537217, Length=567, Percent_Identity=37.037037037037, Blast_Score=330, Evalue=2e-90,
Organism=Caenorhabditis elegans, GI17508053, Length=527, Percent_Identity=35.8633776091082, Blast_Score=261, Evalue=8e-70,
Organism=Caenorhabditis elegans, GI193206116, Length=274, Percent_Identity=40.8759124087591, Blast_Score=211, Evalue=8e-55,
Organism=Caenorhabditis elegans, GI133931034, Length=274, Percent_Identity=40.8759124087591, Blast_Score=211, Evalue=9e-55,
Organism=Caenorhabditis elegans, GI193206114, Length=274, Percent_Identity=40.8759124087591, Blast_Score=211, Evalue=9e-55,
Organism=Caenorhabditis elegans, GI25153574, Length=494, Percent_Identity=31.3765182186235, Blast_Score=204, Evalue=9e-53,
Organism=Caenorhabditis elegans, GI71987364, Length=255, Percent_Identity=40.3921568627451, Blast_Score=199, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI71987372, Length=255, Percent_Identity=40.3921568627451, Blast_Score=199, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI17563250, Length=268, Percent_Identity=40.6716417910448, Blast_Score=198, Evalue=8e-51,
Organism=Caenorhabditis elegans, GI17554786, Length=253, Percent_Identity=41.897233201581, Blast_Score=197, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI17563248, Length=254, Percent_Identity=43.3070866141732, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI25144278, Length=253, Percent_Identity=41.897233201581, Blast_Score=194, Evalue=1e-49,
Organism=Caenorhabditis elegans, GI25144281, Length=253, Percent_Identity=41.897233201581, Blast_Score=194, Evalue=1e-49,
Organism=Caenorhabditis elegans, GI17562804, Length=461, Percent_Identity=32.1041214750542, Blast_Score=193, Evalue=3e-49,
Organism=Caenorhabditis elegans, GI193209502, Length=226, Percent_Identity=43.8053097345133, Blast_Score=191, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI17505546, Length=253, Percent_Identity=37.9446640316205, Blast_Score=182, Evalue=7e-46,
Organism=Caenorhabditis elegans, GI133901662, Length=440, Percent_Identity=33.4090909090909, Blast_Score=181, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI133901658, Length=440, Percent_Identity=33.4090909090909, Blast_Score=181, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI17554784, Length=241, Percent_Identity=41.0788381742739, Blast_Score=180, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI17508701, Length=274, Percent_Identity=35.4014598540146, Blast_Score=179, Evalue=4e-45,
Organism=Caenorhabditis elegans, GI71994521, Length=278, Percent_Identity=39.2086330935252, Blast_Score=159, Evalue=3e-39,
Organism=Caenorhabditis elegans, GI86561515, Length=244, Percent_Identity=36.8852459016393, Blast_Score=159, Evalue=5e-39,
Organism=Caenorhabditis elegans, GI17554264, Length=216, Percent_Identity=40.2777777777778, Blast_Score=158, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI17508421, Length=235, Percent_Identity=42.9787234042553, Blast_Score=154, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI32563584, Length=231, Percent_Identity=43.2900432900433, Blast_Score=154, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI115534323, Length=306, Percent_Identity=35.2941176470588, Blast_Score=152, Evalue=6e-37,
Organism=Caenorhabditis elegans, GI25146157, Length=236, Percent_Identity=38.9830508474576, Blast_Score=151, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI17560432, Length=257, Percent_Identity=38.5214007782101, Blast_Score=142, Evalue=4e-34,
Organism=Caenorhabditis elegans, GI17541226, Length=263, Percent_Identity=33.0798479087452, Blast_Score=139, Evalue=4e-33,
Organism=Caenorhabditis elegans, GI17541224, Length=263, Percent_Identity=33.0798479087452, Blast_Score=139, Evalue=4e-33,
Organism=Caenorhabditis elegans, GI71990294, Length=207, Percent_Identity=31.4009661835749, Blast_Score=79, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17533043, Length=136, Percent_Identity=35.2941176470588, Blast_Score=71, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6320077, Length=528, Percent_Identity=47.9166666666667, Blast_Score=504, Evalue=1e-143,
Organism=Saccharomyces cerevisiae, GI6323429, Length=504, Percent_Identity=44.8412698412698, Blast_Score=420, Evalue=1e-118,
Organism=Saccharomyces cerevisiae, GI6322994, Length=584, Percent_Identity=37.5, Blast_Score=386, Evalue=1e-108,
Organism=Saccharomyces cerevisiae, GI6321709, Length=430, Percent_Identity=35.1162790697674, Blast_Score=234, Evalue=3e-62,
Organism=Saccharomyces cerevisiae, GI6324000, Length=480, Percent_Identity=32.2916666666667, Blast_Score=215, Evalue=2e-56,
Organism=Saccharomyces cerevisiae, GI6320197, Length=268, Percent_Identity=41.4179104477612, Blast_Score=209, Evalue=2e-54,
Organism=Saccharomyces cerevisiae, GI6322651, Length=425, Percent_Identity=33.4117647058824, Blast_Score=206, Evalue=6e-54,
Organism=Saccharomyces cerevisiae, GI6321390, Length=263, Percent_Identity=40.6844106463878, Blast_Score=197, Evalue=4e-51,
Organism=Saccharomyces cerevisiae, GI6322704, Length=254, Percent_Identity=42.1259842519685, Blast_Score=195, Evalue=2e-50,
Organism=Saccharomyces cerevisiae, GI6324833, Length=223, Percent_Identity=41.2556053811659, Blast_Score=189, Evalue=1e-48,
Organism=Saccharomyces cerevisiae, GI6320602, Length=260, Percent_Identity=40.3846153846154, Blast_Score=187, Evalue=6e-48,
Organism=Saccharomyces cerevisiae, GI6325281, Length=237, Percent_Identity=41.7721518987342, Blast_Score=181, Evalue=4e-46,
Organism=Saccharomyces cerevisiae, GI6323736, Length=271, Percent_Identity=41.3284132841328, Blast_Score=178, Evalue=2e-45,
Organism=Saccharomyces cerevisiae, GI6320854, Length=238, Percent_Identity=42.0168067226891, Blast_Score=175, Evalue=2e-44,
Organism=Saccharomyces cerevisiae, GI6324691, Length=224, Percent_Identity=41.0714285714286, Blast_Score=173, Evalue=7e-44,
Organism=Saccharomyces cerevisiae, GI6325431, Length=258, Percent_Identity=37.984496124031, Blast_Score=172, Evalue=1e-43,
Organism=Saccharomyces cerevisiae, GI6319554, Length=402, Percent_Identity=32.8358208955224, Blast_Score=170, Evalue=7e-43,
Organism=Saccharomyces cerevisiae, GI6321465, Length=240, Percent_Identity=37.5, Blast_Score=156, Evalue=8e-39,
Organism=Saccharomyces cerevisiae, GI6325183, Length=273, Percent_Identity=34.7985347985348, Blast_Score=149, Evalue=1e-36,
Organism=Saccharomyces cerevisiae, GI6320887, Length=264, Percent_Identity=31.4393939393939, Blast_Score=134, Evalue=6e-32,
Organism=Drosophila melanogaster, GI161076486, Length=514, Percent_Identity=46.4980544747082, Blast_Score=486, Evalue=1e-137,
Organism=Drosophila melanogaster, GI17137560, Length=514, Percent_Identity=46.4980544747082, Blast_Score=486, Evalue=1e-137,
Organism=Drosophila melanogaster, GI161076488, Length=514, Percent_Identity=46.4980544747082, Blast_Score=485, Evalue=1e-137,
Organism=Drosophila melanogaster, GI19921202, Length=506, Percent_Identity=38.5375494071146, Blast_Score=303, Evalue=2e-82,
Organism=Drosophila melanogaster, GI281365776, Length=288, Percent_Identity=43.75, Blast_Score=236, Evalue=5e-62,
Organism=Drosophila melanogaster, GI45552965, Length=288, Percent_Identity=43.75, Blast_Score=235, Evalue=6e-62,
Organism=Drosophila melanogaster, GI24660075, Length=288, Percent_Identity=43.75, Blast_Score=235, Evalue=6e-62,
Organism=Drosophila melanogaster, GI21355121, Length=467, Percent_Identity=32.3340471092077, Blast_Score=228, Evalue=7e-60,
Organism=Drosophila melanogaster, GI24656825, Length=496, Percent_Identity=32.6612903225806, Blast_Score=222, Evalue=5e-58,
Organism=Drosophila melanogaster, GI24656820, Length=542, Percent_Identity=30.8118081180812, Blast_Score=215, Evalue=7e-56,
Organism=Drosophila melanogaster, GI281363136, Length=566, Percent_Identity=31.4487632508834, Blast_Score=212, Evalue=6e-55,
Organism=Drosophila melanogaster, GI78707192, Length=566, Percent_Identity=31.4487632508834, Blast_Score=212, Evalue=6e-55,
Organism=Drosophila melanogaster, GI17137738, Length=254, Percent_Identity=43.7007874015748, Blast_Score=205, Evalue=6e-53,
Organism=Drosophila melanogaster, GI24649446, Length=251, Percent_Identity=42.6294820717131, Blast_Score=202, Evalue=6e-52,
Organism=Drosophila melanogaster, GI24652279, Length=193, Percent_Identity=50.259067357513, Blast_Score=197, Evalue=2e-50,
Organism=Drosophila melanogaster, GI24651451, Length=250, Percent_Identity=42, Blast_Score=197, Evalue=2e-50,
Organism=Drosophila melanogaster, GI19920408, Length=251, Percent_Identity=41.4342629482072, Blast_Score=194, Evalue=2e-49,
Organism=Drosophila melanogaster, GI18860063, Length=250, Percent_Identity=39.2, Blast_Score=194, Evalue=2e-49,
Organism=Drosophila melanogaster, GI24640100, Length=251, Percent_Identity=38.6454183266932, Blast_Score=191, Evalue=2e-48,
Organism=Drosophila melanogaster, GI281361487, Length=249, Percent_Identity=39.3574297188755, Blast_Score=189, Evalue=4e-48,
Organism=Drosophila melanogaster, GI24663015, Length=224, Percent_Identity=40.625, Blast_Score=185, Evalue=9e-47,
Organism=Drosophila melanogaster, GI17738151, Length=252, Percent_Identity=39.6825396825397, Blast_Score=184, Evalue=1e-46,
Organism=Drosophila melanogaster, GI24658770, Length=248, Percent_Identity=43.1451612903226, Blast_Score=180, Evalue=2e-45,
Organism=Drosophila melanogaster, GI28573010, Length=487, Percent_Identity=30.1848049281314, Blast_Score=180, Evalue=3e-45,
Organism=Drosophila melanogaster, GI17864540, Length=435, Percent_Identity=31.7241379310345, Blast_Score=176, Evalue=4e-44,
Organism=Drosophila melanogaster, GI24665814, Length=229, Percent_Identity=43.6681222707424, Blast_Score=171, Evalue=2e-42,
Organism=Drosophila melanogaster, GI28574878, Length=229, Percent_Identity=43.6681222707424, Blast_Score=171, Evalue=2e-42,
Organism=Drosophila melanogaster, GI24639391, Length=246, Percent_Identity=41.4634146341463, Blast_Score=167, Evalue=2e-41,
Organism=Drosophila melanogaster, GI24581396, Length=292, Percent_Identity=36.6438356164384, Blast_Score=167, Evalue=2e-41,
Organism=Drosophila melanogaster, GI24644145, Length=273, Percent_Identity=35.5311355311355, Blast_Score=162, Evalue=1e-39,
Organism=Drosophila melanogaster, GI18859657, Length=239, Percent_Identity=38.9121338912134, Blast_Score=159, Evalue=6e-39,
Organism=Drosophila melanogaster, GI281360136, Length=267, Percent_Identity=36.3295880149813, Blast_Score=156, Evalue=4e-38,
Organism=Drosophila melanogaster, GI24644411, Length=267, Percent_Identity=36.3295880149813, Blast_Score=156, Evalue=4e-38,
Organism=Drosophila melanogaster, GI281360144, Length=267, Percent_Identity=36.3295880149813, Blast_Score=156, Evalue=4e-38,
Organism=Drosophila melanogaster, GI281360140, Length=267, Percent_Identity=36.3295880149813, Blast_Score=156, Evalue=4e-38,
Organism=Drosophila melanogaster, GI281360146, Length=267, Percent_Identity=36.3295880149813, Blast_Score=156, Evalue=5e-38,
Organism=Drosophila melanogaster, GI281360138, Length=267, Percent_Identity=36.3295880149813, Blast_Score=156, Evalue=5e-38,
Organism=Drosophila melanogaster, GI281360142, Length=267, Percent_Identity=36.3295880149813, Blast_Score=155, Evalue=6e-38,
Organism=Drosophila melanogaster, GI21357333, Length=267, Percent_Identity=36.3295880149813, Blast_Score=155, Evalue=6e-38,
Organism=Drosophila melanogaster, GI20129423, Length=241, Percent_Identity=36.5145228215768, Blast_Score=154, Evalue=2e-37,
Organism=Drosophila melanogaster, GI20129529, Length=234, Percent_Identity=37.6068376068376, Blast_Score=144, Evalue=1e-34,
Organism=Drosophila melanogaster, GI28571849, Length=232, Percent_Identity=41.3793103448276, Blast_Score=137, Evalue=2e-32,
Organism=Drosophila melanogaster, GI28571847, Length=232, Percent_Identity=41.3793103448276, Blast_Score=137, Evalue=2e-32,
Organism=Drosophila melanogaster, GI45554047, Length=160, Percent_Identity=43.75, Blast_Score=128, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24639486, Length=262, Percent_Identity=33.587786259542, Blast_Score=124, Evalue=2e-28,
Organism=Drosophila melanogaster, GI28573181, Length=158, Percent_Identity=34.1772151898734, Blast_Score=79, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR003593
- InterPro:   IPR005938
- InterPro:   IPR003959
- InterPro:   IPR003960
- InterPro:   IPR003338
- InterPro:   IPR004201
- InterPro:   IPR015415 [H]

Pfam domain/function: PF00004 AAA; PF02933 CDC48_2; PF02359 CDC48_N; PF09336 Vps4_C [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 67777; Mature: 67646

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: PS00674 AAA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANLSDFVQGIEQLIELAQKLDEKKQSGELRTEVRIQARPLGSSIPPSGSIPRRRSPAQT
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCC
GDPPWSSEPQVMSAVRFQEPSKAAVPDPPATSADRPESWAGPRLKDVGGLREQLQALREM
CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
VEIPLKRPDLLAKLGLDPPRGVLLVGPPGTGKTLTARALAESLGVNYIAIVGPELIGKYY
HHCCCCCCHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEECHHHHHHHH
GEAEARLRQLFEKAAKSAPCLVFIDEIDALVPNRATVEGEVEKRLVAQMLGLMDGFVAQK
CHHHHHHHHHHHHHHCCCCEEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
GIVVLAATNRPEALDPALRRPGRFDREVIFKVPDREGRREILAIHTRGMPLAEDVDLDSL
CEEEEEECCCCCCCCHHHHCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHH
ADQTLGFVGADLRGLCQAAAYAALRRQVPDLGSPIPESLTVTAADFQQALQQVKPAVLRS
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHH
VEIESPQVSWDQIGGLEHAKQILQEAIEGSLLHPELYEQAQAQAPKGILLSGPPGTGKTL
CCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEECCCCCCHHH
LAKAIASQAKANFIAVSGPELLSKWVGSSEQAVRELFARARQCAPCVIFIDEIDTLAPAR
HHHHHHHHHCCCEEEECCHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHCCCC
GSYSGDSGVSDRVLGQLLAELDGIRPSQGVLVVAATNRKASLDPALTRAGRLELHLSVEL
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHCCCEEEEEEEEEC
PDRSGRREILAVHNRKRPLGPDVDLQGWAEQTEGWSGADLALLSNRAAIAAIRRHRATSE
CCCCCCCHHHEECCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHCHHHHHHHHHHCCCCH
TVDAKTLVIQQEDFCRAFAELQQQRQAG
HCCCEEEEECCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ANLSDFVQGIEQLIELAQKLDEKKQSGELRTEVRIQARPLGSSIPPSGSIPRRRSPAQT
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCC
GDPPWSSEPQVMSAVRFQEPSKAAVPDPPATSADRPESWAGPRLKDVGGLREQLQALREM
CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
VEIPLKRPDLLAKLGLDPPRGVLLVGPPGTGKTLTARALAESLGVNYIAIVGPELIGKYY
HHCCCCCCHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEECHHHHHHHH
GEAEARLRQLFEKAAKSAPCLVFIDEIDALVPNRATVEGEVEKRLVAQMLGLMDGFVAQK
CHHHHHHHHHHHHHHCCCCEEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
GIVVLAATNRPEALDPALRRPGRFDREVIFKVPDREGRREILAIHTRGMPLAEDVDLDSL
CEEEEEECCCCCCCCHHHHCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHH
ADQTLGFVGADLRGLCQAAAYAALRRQVPDLGSPIPESLTVTAADFQQALQQVKPAVLRS
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHH
VEIESPQVSWDQIGGLEHAKQILQEAIEGSLLHPELYEQAQAQAPKGILLSGPPGTGKTL
CCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEECCCCCCHHH
LAKAIASQAKANFIAVSGPELLSKWVGSSEQAVRELFARARQCAPCVIFIDEIDTLAPAR
HHHHHHHHHCCCEEEECCHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHCCCC
GSYSGDSGVSDRVLGQLLAELDGIRPSQGVLVVAATNRKASLDPALTRAGRLELHLSVEL
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHCCCEEEEEEEEEC
PDRSGRREILAVHNRKRPLGPDVDLQGWAEQTEGWSGADLALLSNRAAIAAIRRHRATSE
CCCCCCCHHHEECCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHCHHHHHHHHHHCCCCH
TVDAKTLVIQQEDFCRAFAELQQQRQAG
HCCCEEEEECCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Metalloendopeptidases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]