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The map label for this gene is cpcS2 [H]

Identifier: 86610265

GI number: 86610265

Start: 2938414

End: 2938983

Strand: Direct

Name: cpcS2 [H]

Synonym: CYB_2841

Alternate gene names: 86610265

Gene position: 2938414-2938983 (Clockwise)

Preceding gene: 86610263

Following gene: 90296805

Centisome position: 96.45

GC content: 60.35

Gene sequence:

>570_bases
ATGACCGTAATGGAGTTTTTCGCCCTCAGTGCTGGGGAGTGGATGTGCCAACGCACCAGCCATCACTTGGCTTTTCGCCG
CTCTGAGGGTGGGAGGTCGCGGCTACAAATTGCCACCCTTGCGGCAACCGATCCAGCAGTCATCCGGGTTTGCGAGTTGT
TCAGGGTGGATCCCCGACGAGCTGTGGGAGCAGCGCGGGTGCGGTGGGATGGCGAGCAGGAGTGGGACAACGAAGAGTAC
AAGGGAGACGTGGTGCTGGTACCTATCCCCGATGAGACCGATCCCATGCGCGGGCAGTTGCTGCGGGATCAGGGCTACGC
TGAGAAAGTACCGGTGGCCGGTACCTATGTCATGGGATCCGATGGCGCCCTTACCCTTTACACCCAGTATGAGATGACTG
AGTCGGAAGAGCGCATTTGGTTTGCCAGCCCCAACTTGCGCCTGCGGGCCAGCACTGTCAAGCGGTTCGGTGGCTTCAGC
ATGGCTTCTTTCTGCTCCGAGGTGCGTAAACTCTCCGTCGGCCCTTCTCCCACCCCTACGGTGGCCGAATCCAGCTCTTT
CCGCAGCTAG

Upstream 100 bases:

>100_bases
ACTGATTGCCCCCGCACCACCGTTAGCTAAATCGTTGAGTTGCTCTGCAAGCTAAGATCGGCAAACCCTGTTCCATCGAT
GAGGATCCGCGTCGGCCATG

Downstream 100 bases:

>100_bases
AGCGTTTTCTCCTCAACCGCAACACGGGTTGTGCCATGCACCAAGTCTTGGATCTGGGGATTAACCTGCTCCACGCCAAT
CAACACCAGGCCGACCACAA

Product: CpeS-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MTVMEFFALSAGEWMCQRTSHHLAFRRSEGGRSRLQIATLAATDPAVIRVCELFRVDPRRAVGAARVRWDGEQEWDNEEY
KGDVVLVPIPDETDPMRGQLLRDQGYAEKVPVAGTYVMGSDGALTLYTQYEMTESEERIWFASPNLRLRASTVKRFGGFS
MASFCSEVRKLSVGPSPTPTVAESSSFRS

Sequences:

>Translated_189_residues
MTVMEFFALSAGEWMCQRTSHHLAFRRSEGGRSRLQIATLAATDPAVIRVCELFRVDPRRAVGAARVRWDGEQEWDNEEY
KGDVVLVPIPDETDPMRGQLLRDQGYAEKVPVAGTYVMGSDGALTLYTQYEMTESEERIWFASPNLRLRASTVKRFGGFS
MASFCSEVRKLSVGPSPTPTVAESSSFRS
>Mature_188_residues
TVMEFFALSAGEWMCQRTSHHLAFRRSEGGRSRLQIATLAATDPAVIRVCELFRVDPRRAVGAARVRWDGEQEWDNEEYK
GDVVLVPIPDETDPMRGQLLRDQGYAEKVPVAGTYVMGSDGALTLYTQYEMTESEERIWFASPNLRLRASTVKRFGGFSM
ASFCSEVRKLSVGPSPTPTVAESSSFRS

Specific function: Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpcS/CpeS biliprotein lyase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR018536 [H]

Pfam domain/function: PF09367 CpeS [H]

EC number: NA

Molecular weight: Translated: 21166; Mature: 21035

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVMEFFALSAGEWMCQRTSHHLAFRRSEGGRSRLQIATLAATDPAVIRVCELFRVDPRR
CCHHHEEHHCCCHHHHHHCCCCEEEEECCCCCCEEEEEEEECCCHHHHHHHHHHCCCCHH
AVGAARVRWDGEQEWDNEEYKGDVVLVPIPDETDPMRGQLLRDQGYAEKVPVAGTYVMGS
HCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCHHHEECCCCCCCCCCCCEEEEECC
DGALTLYTQYEMTESEERIWFASPNLRLRASTVKRFGGFSMASFCSEVRKLSVGPSPTPT
CCEEEEEEEEECCCCCCEEEEECCCCEEEHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC
VAESSSFRS
CCCCCCCCC
>Mature Secondary Structure 
TVMEFFALSAGEWMCQRTSHHLAFRRSEGGRSRLQIATLAATDPAVIRVCELFRVDPRR
CHHHEEHHCCCHHHHHHCCCCEEEEECCCCCCEEEEEEEECCCHHHHHHHHHHCCCCHH
AVGAARVRWDGEQEWDNEEYKGDVVLVPIPDETDPMRGQLLRDQGYAEKVPVAGTYVMGS
HCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCHHHEECCCCCCCCCCCCEEEEECC
DGALTLYTQYEMTESEERIWFASPNLRLRASTVKRFGGFSMASFCSEVRKLSVGPSPTPT
CCEEEEEEEEECCCCCCEEEEECCCCEEEHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC
VAESSSFRS
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA