| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is fabZ [H]
Identifier: 86610211
GI number: 86610211
Start: 2882377
End: 2882877
Strand: Direct
Name: fabZ [H]
Synonym: CYB_2786
Alternate gene names: 86610211
Gene position: 2882377-2882877 (Clockwise)
Preceding gene: 86610210
Following gene: 86610212
Centisome position: 94.61
GC content: 59.88
Gene sequence:
>501_bases ATGTCCTCTGATGTCTCTCCTCCTCCCCTTCTCTCGGCTGAGGCAGCCGCTCAATTGGCAACCGCTCCCCCCGTCTTCAC AACGGAGCAGATTTTGGAGATCTTGCCCCATCGCTATCCTTTCTTGCTGGTGGATCGGGTTGTGGAGTATCAACCGGGGC AACGGGCGGTGGGCCTGAAAAACGTCACCTTCAACGAGCCTTTTTTTCAAGGGCATTTCCCCAACCGACCCATCATGCCC GGCGTCCTAATCGTCGAGGCCATGGCCCAGATAGGGGGGATCGTGTTGACCAAGTTGCCGGACGTGGCCGGGCGTTTGGC CCTGTTTGCCGGGATCGATGGCGTTCGCTTTCGCCGCCCGGTACTGCCGGGGGATCAACTGCTGCTCTCCGCCGATTTGC TCACCATTCGCCAGAGGCGCATTGGCAAGATGTTCTGCCGCGCTCAGGTGGGAGGGCAACTGGTAACCGAGGGGGAGCTG ATGTTCTCCCTGGTGGATTGA
Upstream 100 bases:
>100_bases CTCCTTTCCGCAGCTCCCTGGGTGCTCTTTTGGCTGAGTTCTGGCCTGCCGTCCTCCCCGTCCGGGATTTGGTTTTGTCC TCTGCCTCTGTGGGTTCACC
Downstream 100 bases:
>100_bases TGGGCCAACAGCGGCCATCCAGGAGGCGCTCCGGTGTGGGTGTTCTCGCAATTGAGATAAAGTGTTGGGATAGAAAGATG GCTCAGGGGCTGCTTGCGCC
Product: (3R)-hydroxymyristoyl-ACP dehydratase
Products: NA
Alternate protein names: (3R)-hydroxymyristoyl ACP dehydrase [H]
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MSSDVSPPPLLSAEAAAQLATAPPVFTTEQILEILPHRYPFLLVDRVVEYQPGQRAVGLKNVTFNEPFFQGHFPNRPIMP GVLIVEAMAQIGGIVLTKLPDVAGRLALFAGIDGVRFRRPVLPGDQLLLSADLLTIRQRRIGKMFCRAQVGGQLVTEGEL MFSLVD
Sequences:
>Translated_166_residues MSSDVSPPPLLSAEAAAQLATAPPVFTTEQILEILPHRYPFLLVDRVVEYQPGQRAVGLKNVTFNEPFFQGHFPNRPIMP GVLIVEAMAQIGGIVLTKLPDVAGRLALFAGIDGVRFRRPVLPGDQLLLSADLLTIRQRRIGKMFCRAQVGGQLVTEGEL MFSLVD >Mature_165_residues SSDVSPPPLLSAEAAAQLATAPPVFTTEQILEILPHRYPFLLVDRVVEYQPGQRAVGLKNVTFNEPFFQGHFPNRPIMPG VLIVEAMAQIGGIVLTKLPDVAGRLALFAGIDGVRFRRPVLPGDQLLLSADLLTIRQRRIGKMFCRAQVGGQLVTEGELM FSLVD
Specific function: Involved in saturated fatty acids biosynthesis [H]
COG id: COG0764
COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioester dehydratase family. FabZ subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786377, Length=145, Percent_Identity=48.2758620689655, Blast_Score=132, Evalue=9e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013114 - InterPro: IPR010084 [H]
Pfam domain/function: PF07977 FabA [H]
EC number: 4.2.1.-
Molecular weight: Translated: 18146; Mature: 18014
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSDVSPPPLLSAEAAAQLATAPPVFTTEQILEILPHRYPFLLVDRVVEYQPGQRAVGLK CCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCC NVTFNEPFFQGHFPNRPIMPGVLIVEAMAQIGGIVLTKLPDVAGRLALFAGIDGVRFRRP CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEHHCCHHHHHHHHHHCCCCCEEECC VLPGDQLLLSADLLTIRQRRIGKMFCRAQVGGQLVTEGELMFSLVD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECC >Mature Secondary Structure SSDVSPPPLLSAEAAAQLATAPPVFTTEQILEILPHRYPFLLVDRVVEYQPGQRAVGLK CCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCC NVTFNEPFFQGHFPNRPIMPGVLIVEAMAQIGGIVLTKLPDVAGRLALFAGIDGVRFRRP CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEHHCCHHHHHHHHHHCCCCCEEECC VLPGDQLLLSADLLTIRQRRIGKMFCRAQVGGQLVTEGELMFSLVD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Carbon-Oxygen Lyases; Hydro-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA