Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is fabZ [H]

Identifier: 86610211

GI number: 86610211

Start: 2882377

End: 2882877

Strand: Direct

Name: fabZ [H]

Synonym: CYB_2786

Alternate gene names: 86610211

Gene position: 2882377-2882877 (Clockwise)

Preceding gene: 86610210

Following gene: 86610212

Centisome position: 94.61

GC content: 59.88

Gene sequence:

>501_bases
ATGTCCTCTGATGTCTCTCCTCCTCCCCTTCTCTCGGCTGAGGCAGCCGCTCAATTGGCAACCGCTCCCCCCGTCTTCAC
AACGGAGCAGATTTTGGAGATCTTGCCCCATCGCTATCCTTTCTTGCTGGTGGATCGGGTTGTGGAGTATCAACCGGGGC
AACGGGCGGTGGGCCTGAAAAACGTCACCTTCAACGAGCCTTTTTTTCAAGGGCATTTCCCCAACCGACCCATCATGCCC
GGCGTCCTAATCGTCGAGGCCATGGCCCAGATAGGGGGGATCGTGTTGACCAAGTTGCCGGACGTGGCCGGGCGTTTGGC
CCTGTTTGCCGGGATCGATGGCGTTCGCTTTCGCCGCCCGGTACTGCCGGGGGATCAACTGCTGCTCTCCGCCGATTTGC
TCACCATTCGCCAGAGGCGCATTGGCAAGATGTTCTGCCGCGCTCAGGTGGGAGGGCAACTGGTAACCGAGGGGGAGCTG
ATGTTCTCCCTGGTGGATTGA

Upstream 100 bases:

>100_bases
CTCCTTTCCGCAGCTCCCTGGGTGCTCTTTTGGCTGAGTTCTGGCCTGCCGTCCTCCCCGTCCGGGATTTGGTTTTGTCC
TCTGCCTCTGTGGGTTCACC

Downstream 100 bases:

>100_bases
TGGGCCAACAGCGGCCATCCAGGAGGCGCTCCGGTGTGGGTGTTCTCGCAATTGAGATAAAGTGTTGGGATAGAAAGATG
GCTCAGGGGCTGCTTGCGCC

Product: (3R)-hydroxymyristoyl-ACP dehydratase

Products: NA

Alternate protein names: (3R)-hydroxymyristoyl ACP dehydrase [H]

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MSSDVSPPPLLSAEAAAQLATAPPVFTTEQILEILPHRYPFLLVDRVVEYQPGQRAVGLKNVTFNEPFFQGHFPNRPIMP
GVLIVEAMAQIGGIVLTKLPDVAGRLALFAGIDGVRFRRPVLPGDQLLLSADLLTIRQRRIGKMFCRAQVGGQLVTEGEL
MFSLVD

Sequences:

>Translated_166_residues
MSSDVSPPPLLSAEAAAQLATAPPVFTTEQILEILPHRYPFLLVDRVVEYQPGQRAVGLKNVTFNEPFFQGHFPNRPIMP
GVLIVEAMAQIGGIVLTKLPDVAGRLALFAGIDGVRFRRPVLPGDQLLLSADLLTIRQRRIGKMFCRAQVGGQLVTEGEL
MFSLVD
>Mature_165_residues
SSDVSPPPLLSAEAAAQLATAPPVFTTEQILEILPHRYPFLLVDRVVEYQPGQRAVGLKNVTFNEPFFQGHFPNRPIMPG
VLIVEAMAQIGGIVLTKLPDVAGRLALFAGIDGVRFRRPVLPGDQLLLSADLLTIRQRRIGKMFCRAQVGGQLVTEGELM
FSLVD

Specific function: Involved in saturated fatty acids biosynthesis [H]

COG id: COG0764

COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioester dehydratase family. FabZ subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786377, Length=145, Percent_Identity=48.2758620689655, Blast_Score=132, Evalue=9e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013114
- InterPro:   IPR010084 [H]

Pfam domain/function: PF07977 FabA [H]

EC number: 4.2.1.-

Molecular weight: Translated: 18146; Mature: 18014

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSDVSPPPLLSAEAAAQLATAPPVFTTEQILEILPHRYPFLLVDRVVEYQPGQRAVGLK
CCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCC
NVTFNEPFFQGHFPNRPIMPGVLIVEAMAQIGGIVLTKLPDVAGRLALFAGIDGVRFRRP
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEHHCCHHHHHHHHHHCCCCCEEECC
VLPGDQLLLSADLLTIRQRRIGKMFCRAQVGGQLVTEGELMFSLVD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECC
>Mature Secondary Structure 
SSDVSPPPLLSAEAAAQLATAPPVFTTEQILEILPHRYPFLLVDRVVEYQPGQRAVGLK
CCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCC
NVTFNEPFFQGHFPNRPIMPGVLIVEAMAQIGGIVLTKLPDVAGRLALFAGIDGVRFRRP
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEHHCCHHHHHHHHHHCCCCCEEECC
VLPGDQLLLSADLLTIRQRRIGKMFCRAQVGGQLVTEGELMFSLVD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Oxygen Lyases; Hydro-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA