Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86610179

Identifier: 86610179

GI number: 86610179

Start: 2850512

End: 2850994

Strand: Direct

Name: 86610179

Synonym: CYB_2754

Alternate gene names: NA

Gene position: 2850512-2850994 (Clockwise)

Preceding gene: 86610178

Following gene: 86610181

Centisome position: 93.56

GC content: 60.25

Gene sequence:

>483_bases
ATGCCCCTGCTTTCCCCTCTGCGCCTGCGTCGTCTGGCTCGGCAAGAACAACTGAGAAACCGGCAGACCTTGATTACTTT
CCAACTGGGCTCCTACTGCTTCGGCCTCCCTGTTGATCGGGCGCGGCGAGTTTTTAGCTGGGCAGAGTTTCAGCTTGCTC
AGGAGGGCGGCCCCCAGCTTTTGGATACCGGTCGTTTGTTGCTGGGCCGAGGGATCCCTTTTCAACCGGAAGGGGTTATT
CTGTTGCAGCCAGGCAGTTCTGAGGACGGATTGTCCGACCAGATCGACAACCCAGAAACAGGGGCTCTGCCCATTCCCAC
TCAGCCCCTCCTGCGCCGTCTGCCCTCTTCCCAGTTGCAGCCTCTCCCCAGCCGCTATGCAGCTCAGGCCCGCCAACGGG
GTATTGTGCAGTGGATCCCGCCAGTTGAAGGCCAGCTCCCCCTGTTGGTGTTCGACCCTCATCTCTGGCCTGCCTGTTCT
TGA

Upstream 100 bases:

>100_bases
CAAGCCCTTCCAGGAACAGGAGCTGATCCAAAAGCTGCGGCAACTGCTGCAACCAGCCTCTTCGGCACCTTCCACCGGCG
TTTTGATGGCGAGGTAGTCC

Downstream 100 bases:

>100_bases
GAAGGGAGAGGGGGCAGTTGCAGTTCTGGATTCTCCACGCGGGTTAGCTCCCAGCGAAAGGGCTCCCCACCCCGTCGCTG
CCAATTCAATTGGAAGGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MPLLSPLRLRRLARQEQLRNRQTLITFQLGSYCFGLPVDRARRVFSWAEFQLAQEGGPQLLDTGRLLLGRGIPFQPEGVI
LLQPGSSEDGLSDQIDNPETGALPIPTQPLLRRLPSSQLQPLPSRYAAQARQRGIVQWIPPVEGQLPLLVFDPHLWPACS

Sequences:

>Translated_160_residues
MPLLSPLRLRRLARQEQLRNRQTLITFQLGSYCFGLPVDRARRVFSWAEFQLAQEGGPQLLDTGRLLLGRGIPFQPEGVI
LLQPGSSEDGLSDQIDNPETGALPIPTQPLLRRLPSSQLQPLPSRYAAQARQRGIVQWIPPVEGQLPLLVFDPHLWPACS
>Mature_159_residues
PLLSPLRLRRLARQEQLRNRQTLITFQLGSYCFGLPVDRARRVFSWAEFQLAQEGGPQLLDTGRLLLGRGIPFQPEGVIL
LQPGSSEDGLSDQIDNPETGALPIPTQPLLRRLPSSQLQPLPSRYAAQARQRGIVQWIPPVEGQLPLLVFDPHLWPACS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17919; Mature: 17788

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLLSPLRLRRLARQEQLRNRQTLITFQLGSYCFGLPVDRARRVFSWAEFQLAQEGGPQL
CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEECCCHHHHHHHHHHHHHHHHHCCCCCC
LDTGRLLLGRGIPFQPEGVILLQPGSSEDGLSDQIDNPETGALPIPTQPLLRRLPSSQLQ
HHCCCEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC
PLPSRYAAQARQRGIVQWIPPVEGQLPLLVFDPHLWPACS
CCHHHHHHHHHHCCCEEECCCCCCCCCEEEECCCCCCCCC
>Mature Secondary Structure 
PLLSPLRLRRLARQEQLRNRQTLITFQLGSYCFGLPVDRARRVFSWAEFQLAQEGGPQL
CCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEECCCHHHHHHHHHHHHHHHHHCCCCCC
LDTGRLLLGRGIPFQPEGVILLQPGSSEDGLSDQIDNPETGALPIPTQPLLRRLPSSQLQ
HHCCCEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC
PLPSRYAAQARQRGIVQWIPPVEGQLPLLVFDPHLWPACS
CCHHHHHHHHHHCCCEEECCCCCCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA