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The map label for this gene is secY [H]

Identifier: 86610046

GI number: 86610046

Start: 2708968

End: 2710266

Strand: Direct

Name: secY [H]

Synonym: CYB_2615

Alternate gene names: 86610046

Gene position: 2708968-2710266 (Clockwise)

Preceding gene: 86610045

Following gene: 86610047

Centisome position: 88.92

GC content: 56.51

Gene sequence:

>1299_bases
ATGGTTGACACACGAGGCTCCGCCCCTTCTGCCCAAGAGACCTTTATGCAGATGGCTATGGCCTCTGGCCTGCGCAGCCG
TCTGTTTCTCACCTTGGGCTTGCTGCTGTTGGTCAGACTGGGCATTTACATCCCCATTCCCAGTATCGATCGGGCCCGCT
TTGCTGCCGAAGCTGCCAACAGCCCTGTGTTTGGCCTGCTGGATGTCTTCTCCGGCGGGGGGATTTCTGCTTTGGGAATT
TTCGCCCTTGGGATCCTGCCCTTCATCAATGCCTCAATTATCATGCAGTTGCTGGTCTCGGCCATTCCAGCCTTGGAGAA
CCTGCAGAAAAACGAGGGAGAACAGGGGCGGCGGCAGATTTCTCAATACACCCGCTATGTCACCTTGGTTTGGGCCATCA
TCCAGGGCATTGGCATTTCCTTTTGGGTGCGGGAGTTTGCCAGTACCACCAATGAGTTGGCCTTCATGGCCTCCACCACC
CTGGCTCTGGCGGCGGGATCCCTGTTTGTGATGTGGCTGGGAGAGATGATCACGGAGAAAGGGGTGGGAAGTGGCCCTTC
GCTCTTGATCTTCGTCAACATTGTTGCCACTCTGCCCCGTGCCCTCGGACAGACTATTAGCCTGGCCCGTGCCGATAGCA
GCACCATCGGTGGCATCTTGCTGTTGCTGGCAATCTTTTTGGTCACCATTGTCGGCATTGTCTTTGTCCAAGAAGGCAGC
CGCAAGATCCCTATCGTCTACGCCAAGCGCCAGGTGGGCAACAAGCTGTTCCGCGAGCAGAAAAGCTATCTGCCCCTGAG
GCTAAACCAAGGGGGGGTGATGCCGATCATCTTTGCCTACTCGGTGATGTCCCTGCCTCTGGCCCTGGCCCAGTACACCC
AAAACCTGACTTTGGTGCAAGTGGCCAACTTCCTATCCCCCACCTCCTGGTTCTACATTCCTTTTTATTTCGTGCTGATC
CTCTTCTTCAGCTACTTCTACGCCTCTTTGCTCATCAACCCGGTGGATCTGGCTCAAAACTTGAAGAAGATGGGGGCCAG
CATTCCAGGGGTACGCCCGGGCAAGGCCACTGCCGAGTATGTCGAAGGGATCCTCAACCGCCTGACGCTGCTGGGGGCTT
TGTTCCTGTGCGCGGTGGCCATCATCCCGACGACGGTGGAACGGGCAACCGGCATCACCACTTTCCAAGGTTTGGGGGCG
ACCTCGCTACTGATTTTGGTGGGGGTGGCGATCGAGACCTCCAAGCAGATCCAGACTTATGTCATCTCACAACGCTACGA
AGGGATGGTCAAACAGTAG

Upstream 100 bases:

>100_bases
ACTTTTTTGATTTTGCTTTGATTTTGCCGACTGCTCCACCAGCAGCGTAGAGTGGTAGATAGCTAACCTTGCCCTTTGCT
CCCGCGAGATTCTCTTCCCT

Downstream 100 bases:

>100_bases
TGCCGAGGTTGATCTTTCTGGGGCCGCCGGGGGCGGGCAAAGGTACACAGGCGGAGCGGCTGGCGGCCATTTACCACACG
CCCAAAATTTCCACAGGCGA

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MVDTRGSAPSAQETFMQMAMASGLRSRLFLTLGLLLLVRLGIYIPIPSIDRARFAAEAANSPVFGLLDVFSGGGISALGI
FALGILPFINASIIMQLLVSAIPALENLQKNEGEQGRRQISQYTRYVTLVWAIIQGIGISFWVREFASTTNELAFMASTT
LALAAGSLFVMWLGEMITEKGVGSGPSLLIFVNIVATLPRALGQTISLARADSSTIGGILLLLAIFLVTIVGIVFVQEGS
RKIPIVYAKRQVGNKLFREQKSYLPLRLNQGGVMPIIFAYSVMSLPLALAQYTQNLTLVQVANFLSPTSWFYIPFYFVLI
LFFSYFYASLLINPVDLAQNLKKMGASIPGVRPGKATAEYVEGILNRLTLLGALFLCAVAIIPTTVERATGITTFQGLGA
TSLLILVGVAIETSKQIQTYVISQRYEGMVKQ

Sequences:

>Translated_432_residues
MVDTRGSAPSAQETFMQMAMASGLRSRLFLTLGLLLLVRLGIYIPIPSIDRARFAAEAANSPVFGLLDVFSGGGISALGI
FALGILPFINASIIMQLLVSAIPALENLQKNEGEQGRRQISQYTRYVTLVWAIIQGIGISFWVREFASTTNELAFMASTT
LALAAGSLFVMWLGEMITEKGVGSGPSLLIFVNIVATLPRALGQTISLARADSSTIGGILLLLAIFLVTIVGIVFVQEGS
RKIPIVYAKRQVGNKLFREQKSYLPLRLNQGGVMPIIFAYSVMSLPLALAQYTQNLTLVQVANFLSPTSWFYIPFYFVLI
LFFSYFYASLLINPVDLAQNLKKMGASIPGVRPGKATAEYVEGILNRLTLLGALFLCAVAIIPTTVERATGITTFQGLGA
TSLLILVGVAIETSKQIQTYVISQRYEGMVKQ
>Mature_432_residues
MVDTRGSAPSAQETFMQMAMASGLRSRLFLTLGLLLLVRLGIYIPIPSIDRARFAAEAANSPVFGLLDVFSGGGISALGI
FALGILPFINASIIMQLLVSAIPALENLQKNEGEQGRRQISQYTRYVTLVWAIIQGIGISFWVREFASTTNELAFMASTT
LALAAGSLFVMWLGEMITEKGVGSGPSLLIFVNIVATLPRALGQTISLARADSSTIGGILLLLAIFLVTIVGIVFVQEGS
RKIPIVYAKRQVGNKLFREQKSYLPLRLNQGGVMPIIFAYSVMSLPLALAQYTQNLTLVQVANFLSPTSWFYIPFYFVLI
LFFSYFYASLLINPVDLAQNLKKMGASIPGVRPGKATAEYVEGILNRLTLLGALFLCAVAIIPTTVERATGITTFQGLGA
TSLLILVGVAIETSKQIQTYVISQRYEGMVKQ

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=420, Percent_Identity=40.9523809523809, Blast_Score=281, Evalue=8e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 46844; Mature: 46844

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDTRGSAPSAQETFMQMAMASGLRSRLFLTLGLLLLVRLGIYIPIPSIDRARFAAEAAN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC
SPVFGLLDVFSGGGISALGIFALGILPFINASIIMQLLVSAIPALENLQKNEGEQGRRQI
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
SQYTRYVTLVWAIIQGIGISFWVREFASTTNELAFMASTTLALAAGSLFVMWLGEMITEK
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GVGSGPSLLIFVNIVATLPRALGQTISLARADSSTIGGILLLLAIFLVTIVGIVFVQEGS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
RKIPIVYAKRQVGNKLFREQKSYLPLRLNQGGVMPIIFAYSVMSLPLALAQYTQNLTLVQ
CCCCEEEHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH
VANFLSPTSWFYIPFYFVLILFFSYFYASLLINPVDLAQNLKKMGASIPGVRPGKATAEY
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHH
VEGILNRLTLLGALFLCAVAIIPTTVERATGITTFQGLGATSLLILVGVAIETSKQIQTY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHH
VISQRYEGMVKQ
HHHHHHHHCCCC
>Mature Secondary Structure
MVDTRGSAPSAQETFMQMAMASGLRSRLFLTLGLLLLVRLGIYIPIPSIDRARFAAEAAN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC
SPVFGLLDVFSGGGISALGIFALGILPFINASIIMQLLVSAIPALENLQKNEGEQGRRQI
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
SQYTRYVTLVWAIIQGIGISFWVREFASTTNELAFMASTTLALAAGSLFVMWLGEMITEK
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GVGSGPSLLIFVNIVATLPRALGQTISLARADSSTIGGILLLLAIFLVTIVGIVFVQEGS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
RKIPIVYAKRQVGNKLFREQKSYLPLRLNQGGVMPIIFAYSVMSLPLALAQYTQNLTLVQ
CCCCEEEHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH
VANFLSPTSWFYIPFYFVLILFFSYFYASLLINPVDLAQNLKKMGASIPGVRPGKATAEY
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHH
VEGILNRLTLLGALFLCAVAIIPTTVERATGITTFQGLGATSLLILVGVAIETSKQIQTY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHH
VISQRYEGMVKQ
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1420358 [H]