| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is metK [H]
Identifier: 86610022
GI number: 86610022
Start: 2690915
End: 2692159
Strand: Direct
Name: metK [H]
Synonym: CYB_2590
Alternate gene names: 86610022
Gene position: 2690915-2692159 (Clockwise)
Preceding gene: 86610021
Following gene: 86610028
Centisome position: 88.32
GC content: 60.96
Gene sequence:
>1245_bases TTGTTTTCCTCGGAGTCGGTGACGGAGGGGCACCCCGACAAAATCTGCGATCAGATCTCCGATGCCATCGTGGATGCCCT CTTGACGGCGGATCCCCTCAGTCGGGTGGCCGCCGAGGTGGTGGTCAATACGGGCCTGGTTCTGTTGACCGGGGAGATTA CCTCACAAGCGCAGGTCAACTTCACCCGTCTGGTGCGGGACAAGGTGGCCGAAATTGGCTATACCGATGCCAAGAATGGG TTTTGTGCAGAAAGCTGCGCGGTGTTGGTGGCTTTCGATGAGCAATCTCCCGATATTGCCCAAGGGGTGAACATGGCCCT GGAAAGTCGCGGCTCCCAGGAAGATCAATTCGACTTGGTCGGGGCCGGGGATCAGGGGTTGATGTTTGGCTTTGCCTGCG ATGAAACTCCCGAGTTGATGCCCTTGCCCATTAGCTTGGCCCACCGCCTCAGCCGCCAGTTGGCCACGGTTCGCAAAAAC GGCACCCTGCCCTATCTGCGCCCGGATGGCAAAACGCAGGTGACTGTGGCCTATGAGGAAGGTCGCCCGGTGGGCATTCA CACCCTGCTCATCTCCACCCAGCACACACCCACGATTGGCGCCATTACGGAAGAGGCGGCGGTGCAAGAGCGGATCCGCG CCGATCTCTGGGAGGCAGTGGTCACGCCGGTGTTTGCCGAGCTGCCCATCAAGCCGGATAGCCACACCCGCTTCCTCACC AATCCCACCGGCAAGTTTGTCATCGGCGGCCCTCAGGGAGATGCGGGCCTGACCGGACGCAAGATCATCGTCGATACCTA CGGCGGCTATTCTCGCCATGGGGGTGGGGCCTTCTCCGGCAAGGATCCCACCAAGGTGGATCGCAGCGCTGCCTATGCGG CTCGTTACGTGGCCAAGAACATCGTGGCAGCTGGCTTGGCGCAAAAATGTGAAGTGCAGGTGAGCTACGCCATTGGGGTA GCCCGCCCCATCAACATTTTGGTGGAAACCTTTGGCACAGGGCGCATCCCCGACGAAGAGCTGTTGCGGCTGGTGCAGCG CCACTTCGATCTGAGGCCGGCAGCCATTTTGGCCCAGTTCCAACTGCGGGAGCTGCCCCGCCAACGGGGGGGACGCTTCT ACCAAAATGTAGCGGTCTATGGTCACTTCGGGCAAACTCACCTGGATCTGCCCTGGGAGCGCACCGATAAAGCCGCTCTG CTGCGGGAGGAGGCTCTTGCCAAGGCGACTGCCCTCTTGGCCTAA
Upstream 100 bases:
>100_bases CTCTTTCTCCGACGGATAATGAACGAGCGGGTGAGCCTTGTTTTTTGTTCAGGTTCTCAGTTCTAGCTTTTAAGGAGAAG GTTCGTTGTCCAAGTCGTTT
Downstream 100 bases:
>100_bases GAGGGGATCACTAGGTTGTGTTGATCTTTCATTTGAGCCAAAAGAGAGCACTGACGAGATAGAGAAAACTCAAGAAGTTC CTGGCCAATTTGTCAAAACG
Product: S-adenosylmethionine synthetase
Products: NA
Alternate protein names: AdoMet synthase; MAT; Methionine adenosyltransferase [H]
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MFSSESVTEGHPDKICDQISDAIVDALLTADPLSRVAAEVVVNTGLVLLTGEITSQAQVNFTRLVRDKVAEIGYTDAKNG FCAESCAVLVAFDEQSPDIAQGVNMALESRGSQEDQFDLVGAGDQGLMFGFACDETPELMPLPISLAHRLSRQLATVRKN GTLPYLRPDGKTQVTVAYEEGRPVGIHTLLISTQHTPTIGAITEEAAVQERIRADLWEAVVTPVFAELPIKPDSHTRFLT NPTGKFVIGGPQGDAGLTGRKIIVDTYGGYSRHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLAQKCEVQVSYAIGV ARPINILVETFGTGRIPDEELLRLVQRHFDLRPAAILAQFQLRELPRQRGGRFYQNVAVYGHFGQTHLDLPWERTDKAAL LREEALAKATALLA
Sequences:
>Translated_414_residues MFSSESVTEGHPDKICDQISDAIVDALLTADPLSRVAAEVVVNTGLVLLTGEITSQAQVNFTRLVRDKVAEIGYTDAKNG FCAESCAVLVAFDEQSPDIAQGVNMALESRGSQEDQFDLVGAGDQGLMFGFACDETPELMPLPISLAHRLSRQLATVRKN GTLPYLRPDGKTQVTVAYEEGRPVGIHTLLISTQHTPTIGAITEEAAVQERIRADLWEAVVTPVFAELPIKPDSHTRFLT NPTGKFVIGGPQGDAGLTGRKIIVDTYGGYSRHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLAQKCEVQVSYAIGV ARPINILVETFGTGRIPDEELLRLVQRHFDLRPAAILAQFQLRELPRQRGGRFYQNVAVYGHFGQTHLDLPWERTDKAAL LREEALAKATALLA >Mature_414_residues MFSSESVTEGHPDKICDQISDAIVDALLTADPLSRVAAEVVVNTGLVLLTGEITSQAQVNFTRLVRDKVAEIGYTDAKNG FCAESCAVLVAFDEQSPDIAQGVNMALESRGSQEDQFDLVGAGDQGLMFGFACDETPELMPLPISLAHRLSRQLATVRKN GTLPYLRPDGKTQVTVAYEEGRPVGIHTLLISTQHTPTIGAITEEAAVQERIRADLWEAVVTPVFAELPIKPDSHTRFLT NPTGKFVIGGPQGDAGLTGRKIIVDTYGGYSRHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLAQKCEVQVSYAIGV ARPINILVETFGTGRIPDEELLRLVQRHFDLRPAAILAQFQLRELPRQRGGRFYQNVAVYGHFGQTHLDLPWERTDKAAL LREEALAKATALLA
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the e
COG id: COG0192
COG function: function code H; S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase family [H]
Homologues:
Organism=Homo sapiens, GI5174529, Length=398, Percent_Identity=53.5175879396985, Blast_Score=387, Evalue=1e-107, Organism=Homo sapiens, GI4557737, Length=398, Percent_Identity=54.5226130653266, Blast_Score=386, Evalue=1e-107, Organism=Escherichia coli, GI1789311, Length=408, Percent_Identity=56.8627450980392, Blast_Score=444, Evalue=1e-126, Organism=Caenorhabditis elegans, GI17538498, Length=398, Percent_Identity=52.0100502512563, Blast_Score=384, Evalue=1e-107, Organism=Caenorhabditis elegans, GI25145633, Length=418, Percent_Identity=50.9569377990431, Blast_Score=384, Evalue=1e-107, Organism=Caenorhabditis elegans, GI17538494, Length=398, Percent_Identity=51.7587939698493, Blast_Score=384, Evalue=1e-107, Organism=Caenorhabditis elegans, GI17551082, Length=413, Percent_Identity=50.1210653753027, Blast_Score=378, Evalue=1e-105, Organism=Caenorhabditis elegans, GI32565911, Length=353, Percent_Identity=50.4249291784703, Blast_Score=321, Evalue=5e-88, Organism=Caenorhabditis elegans, GI25145635, Length=373, Percent_Identity=49.3297587131367, Blast_Score=321, Evalue=5e-88, Organism=Caenorhabditis elegans, GI32565905, Length=398, Percent_Identity=46.7336683417085, Blast_Score=319, Evalue=2e-87, Organism=Caenorhabditis elegans, GI32565903, Length=326, Percent_Identity=50.6134969325153, Blast_Score=291, Evalue=4e-79, Organism=Caenorhabditis elegans, GI32565909, Length=81, Percent_Identity=55.5555555555556, Blast_Score=103, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6323209, Length=398, Percent_Identity=50, Blast_Score=375, Evalue=1e-105, Organism=Saccharomyces cerevisiae, GI6320710, Length=401, Percent_Identity=49.3765586034913, Blast_Score=375, Evalue=1e-105, Organism=Drosophila melanogaster, GI45552159, Length=398, Percent_Identity=50.5025125628141, Blast_Score=355, Evalue=2e-98, Organism=Drosophila melanogaster, GI24580529, Length=398, Percent_Identity=50.5025125628141, Blast_Score=355, Evalue=2e-98, Organism=Drosophila melanogaster, GI24580537, Length=398, Percent_Identity=50.5025125628141, Blast_Score=355, Evalue=2e-98, Organism=Drosophila melanogaster, GI24580533, Length=398, Percent_Identity=50.5025125628141, Blast_Score=355, Evalue=2e-98, Organism=Drosophila melanogaster, GI24580535, Length=398, Percent_Identity=50.5025125628141, Blast_Score=355, Evalue=2e-98, Organism=Drosophila melanogaster, GI24580531, Length=398, Percent_Identity=50.5025125628141, Blast_Score=355, Evalue=2e-98, Organism=Drosophila melanogaster, GI24580527, Length=398, Percent_Identity=50.5025125628141, Blast_Score=352, Evalue=3e-97, Organism=Drosophila melanogaster, GI24580525, Length=398, Percent_Identity=50.5025125628141, Blast_Score=352, Evalue=3e-97, Organism=Drosophila melanogaster, GI24580541, Length=400, Percent_Identity=49, Blast_Score=335, Evalue=5e-92, Organism=Drosophila melanogaster, GI24580539, Length=125, Percent_Identity=53.6, Blast_Score=130, Evalue=2e-30,
Paralogues:
None
Copy number: 7,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022631 - InterPro: IPR022630 - InterPro: IPR022629 - InterPro: IPR022628 - InterPro: IPR002133 - InterPro: IPR022636 [H]
Pfam domain/function: PF02773 S-AdoMet_synt_C; PF02772 S-AdoMet_synt_M; PF00438 S-AdoMet_synt_N [H]
EC number: =2.5.1.6 [H]
Molecular weight: Translated: 44820; Mature: 44820
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: PS00376 ADOMET_SYNTHETASE_1 ; PS00377 ADOMET_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSSESVTEGHPDKICDQISDAIVDALLTADPLSRVAAEVVVNTGLVLLTGEITSQAQVN CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEECCCCCHHHH FTRLVRDKVAEIGYTDAKNGFCAESCAVLVAFDEQSPDIAQGVNMALESRGSQEDQFDLV HHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEE GAGDQGLMFGFACDETPELMPLPISLAHRLSRQLATVRKNGTLPYLRPDGKTQVTVAYEE ECCCCCEEEEEECCCCCCCEECCHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEEEEEC GRPVGIHTLLISTQHTPTIGAITEEAAVQERIRADLWEAVVTPVFAELPIKPDSHTRFLT CCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE NPTGKFVIGGPQGDAGLTGRKIIVDTYGGYSRHGGGAFSGKDPTKVDRSAAYAARYVAKN CCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH IVAAGLAQKCEVQVSYAIGVARPINILVETFGTGRIPDEELLRLVQRHFDLRPAAILAQF HHHHCCHHHCEEEEEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHH QLRELPRQRGGRFYQNVAVYGHFGQTHLDLPWERTDKAALLREEALAKATALLA HHHHHHHHHCCCEEEEEEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFSSESVTEGHPDKICDQISDAIVDALLTADPLSRVAAEVVVNTGLVLLTGEITSQAQVN CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEECCCCCHHHH FTRLVRDKVAEIGYTDAKNGFCAESCAVLVAFDEQSPDIAQGVNMALESRGSQEDQFDLV HHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEE GAGDQGLMFGFACDETPELMPLPISLAHRLSRQLATVRKNGTLPYLRPDGKTQVTVAYEE ECCCCCEEEEEECCCCCCCEECCHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEEEEEC GRPVGIHTLLISTQHTPTIGAITEEAAVQERIRADLWEAVVTPVFAELPIKPDSHTRFLT CCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE NPTGKFVIGGPQGDAGLTGRKIIVDTYGGYSRHGGGAFSGKDPTKVDRSAAYAARYVAKN CCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH IVAAGLAQKCEVQVSYAIGVARPINILVETFGTGRIPDEELLRLVQRHFDLRPAAILAQF HHHHCCHHHCEEEEEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHH QLRELPRQRGGRFYQNVAVYGHFGQTHLDLPWERTDKAALLREEALAKATALLA HHHHHHHHHCCCEEEEEEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA