Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609999

Identifier: 86609999

GI number: 86609999

Start: 2670285

End: 2671964

Strand: Direct

Name: 86609999

Synonym: CYB_2566

Alternate gene names: NA

Gene position: 2670285-2671964 (Clockwise)

Preceding gene: 86609998

Following gene: 86610000

Centisome position: 87.65

GC content: 60.48

Gene sequence:

>1680_bases
ATGCAGCACAGCTGGATTGCCCCCCAAGATCTCTATCCGTTGATCCCGGTCGAACTGGTGCGTATCGGCGAGATCTTGAT
GCTGCATGGGTATCTGGAGCTGGAGCACATCCATCAGGCTCTGATTCAGCAGCGGCAGCACCCGGAGCGCAAGCTGGGGG
AGATCTTGGTGCAGCAGGGCTGGGTGCAACCCCACTGGTTGGAATGGGCCTTGGACAAGCAACAGCGGCTGCGGCGCCAG
AAAGGAGCTGCCAACAGTTGGGAAGTGATGGTGGAGCAGTGGTCCACCATTCCCGATCAGCCCCCTCTTTATGTCTCCCC
TCTACAGGTAGCCCAAGAGACCTACAGAGTTACCCAGCAATACAAAGCCCAGCTGGAGCGCTACCAAGAGCAAATTGCCA
TCTTAGAAGCGCAACTGGAGCAGCAGCGGCAGCAGCAACAGCTCCTGGTCGAACAATCGCTGCAGCAGGTTGCCGACCAT
CAAGCCCGCCAGCAGGAACAGCAGCAGCGCATTGCCCAATTGGAAGCCCAAATTCAACAGGAGACAGAACAACAAAAGGC
TGCCCAACAGCGCATTCGGGAACTGGAGGAGCAACTCCAAGCCCAGCAAACTCAGGGATCCGCGCAACTGCAAGCCGCCC
AAGCAGAGCTGGAGACCCTGCGGCGCCGCTGCCACGAGCTGACAGAATGGCAATCTCAAGCCAAACACAAGCTGCAAGAG
CTGGGATCCCAACTGCAGGAGCAGCAGAAGATACAGCAGGATCAGGCACAGCAGCTCCAAGAGCAGGCCCACCTGCGTCA
TACTCTGCAGCAAATGGAAGCCCAAGTGGCTGCCCTGAACCAGTCGCTGCAGGAGCACCAACACCAACTCCAACTGGCCC
AGTCCACGAAACAGCGCTTAACTGCCGACCTGGCCCACGTTCGCCAAGAAGCTGCCGAGGCCACCCACCGCCTGCAAGTG
CAGCTCCAAGAAACCCAAGCCCAACTGCGAGAAACTCAAGATCGCTTGCAGCAAGCCCAAGCCCAAGTGAGCCAGCTCCA
GGCCCAACTGCAGGCGGCCCAAGCGGAAAACCGTGCTCTAGCCGCAGCGGTAGCCGAAGCCCGACGAACTTCCCCACCTG
CAGCCGCACCGACCCCAGCTTCGGAGAAAGCCCGGCCAGAGGCAGAGGATCTCAAGGCCCTGACCGTAGCCGACTGGGCA
GCGGAGCTGAGTGCCCCAGAAAGCGAATTGCCCCCGCAGCAGTATTTGGGGGAAGAGGACTTGGAAGCTCTACAGCGGGC
TACCCCCTGGGTACAGCGGGTATTGACCCAATTGCGGGCGGCTGGCCTAATCGACAATGCCGGCATCGAAACCGTCATTC
ACGCTTGGGAAAAGGAAGGGGGCACCTTCACGGATGTGCTAGCCCACCACAGCGGCCTCAAGCCGGAGACCGTCAAATTT
TTCAGCGAAGGGGGCTACTCTGTTCAACTGGCGGGGGGACGCCACGTGGCCGATTACCTCAAGGCTTCTGGGTTGGTCAG
CGCCGCCCAAATCGAACAGATCCAGAAGCACCTGCCGCCAGGGGGATCCCTGTGTCAGGCCCTTGCCCAAGCCGGGATTC
TACGCCGGGCCACTGCCCTGTATTTCGAGCGCCACTTCGGCGGGCAAAAGCCCCGCCGCCCGCTGCGGGAAGAGCTTTAG

Upstream 100 bases:

>100_bases
GGGAGAAGCCCTCAATCGAGCAGGACTGCTCACCCCCGCCCAACTGGCTCAGGCCATGTGGGAAAAGGCCGACAACCCCT
TGATGTTGGGGGAGCTGTGT

Downstream 100 bases:

>100_bases
AGGAACCATGCTCTATCGCTGACGCCAACGACCGACAAGGGATCCGAATACAGACACAAGCTGCCAACAAGATGCCAATT
AGACTAGAAACTAGATAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 559; Mature: 559

Protein sequence:

>559_residues
MQHSWIAPQDLYPLIPVELVRIGEILMLHGYLELEHIHQALIQQRQHPERKLGEILVQQGWVQPHWLEWALDKQQRLRRQ
KGAANSWEVMVEQWSTIPDQPPLYVSPLQVAQETYRVTQQYKAQLERYQEQIAILEAQLEQQRQQQQLLVEQSLQQVADH
QARQQEQQQRIAQLEAQIQQETEQQKAAQQRIRELEEQLQAQQTQGSAQLQAAQAELETLRRRCHELTEWQSQAKHKLQE
LGSQLQEQQKIQQDQAQQLQEQAHLRHTLQQMEAQVAALNQSLQEHQHQLQLAQSTKQRLTADLAHVRQEAAEATHRLQV
QLQETQAQLRETQDRLQQAQAQVSQLQAQLQAAQAENRALAAAVAEARRTSPPAAAPTPASEKARPEAEDLKALTVADWA
AELSAPESELPPQQYLGEEDLEALQRATPWVQRVLTQLRAAGLIDNAGIETVIHAWEKEGGTFTDVLAHHSGLKPETVKF
FSEGGYSVQLAGGRHVADYLKASGLVSAAQIEQIQKHLPPGGSLCQALAQAGILRRATALYFERHFGGQKPRRPLREEL

Sequences:

>Translated_559_residues
MQHSWIAPQDLYPLIPVELVRIGEILMLHGYLELEHIHQALIQQRQHPERKLGEILVQQGWVQPHWLEWALDKQQRLRRQ
KGAANSWEVMVEQWSTIPDQPPLYVSPLQVAQETYRVTQQYKAQLERYQEQIAILEAQLEQQRQQQQLLVEQSLQQVADH
QARQQEQQQRIAQLEAQIQQETEQQKAAQQRIRELEEQLQAQQTQGSAQLQAAQAELETLRRRCHELTEWQSQAKHKLQE
LGSQLQEQQKIQQDQAQQLQEQAHLRHTLQQMEAQVAALNQSLQEHQHQLQLAQSTKQRLTADLAHVRQEAAEATHRLQV
QLQETQAQLRETQDRLQQAQAQVSQLQAQLQAAQAENRALAAAVAEARRTSPPAAAPTPASEKARPEAEDLKALTVADWA
AELSAPESELPPQQYLGEEDLEALQRATPWVQRVLTQLRAAGLIDNAGIETVIHAWEKEGGTFTDVLAHHSGLKPETVKF
FSEGGYSVQLAGGRHVADYLKASGLVSAAQIEQIQKHLPPGGSLCQALAQAGILRRATALYFERHFGGQKPRRPLREEL
>Mature_559_residues
MQHSWIAPQDLYPLIPVELVRIGEILMLHGYLELEHIHQALIQQRQHPERKLGEILVQQGWVQPHWLEWALDKQQRLRRQ
KGAANSWEVMVEQWSTIPDQPPLYVSPLQVAQETYRVTQQYKAQLERYQEQIAILEAQLEQQRQQQQLLVEQSLQQVADH
QARQQEQQQRIAQLEAQIQQETEQQKAAQQRIRELEEQLQAQQTQGSAQLQAAQAELETLRRRCHELTEWQSQAKHKLQE
LGSQLQEQQKIQQDQAQQLQEQAHLRHTLQQMEAQVAALNQSLQEHQHQLQLAQSTKQRLTADLAHVRQEAAEATHRLQV
QLQETQAQLRETQDRLQQAQAQVSQLQAQLQAAQAENRALAAAVAEARRTSPPAAAPTPASEKARPEAEDLKALTVADWA
AELSAPESELPPQQYLGEEDLEALQRATPWVQRVLTQLRAAGLIDNAGIETVIHAWEKEGGTFTDVLAHHSGLKPETVKF
FSEGGYSVQLAGGRHVADYLKASGLVSAAQIEQIQKHLPPGGSLCQALAQAGILRRATALYFERHFGGQKPRRPLREEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63607; Mature: 63607

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: PS00014 ER_TARGET

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCCCCCCCCHHHCC
>Mature Secondary Structure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HHHHHCCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA