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The map label for this gene is ssuC [C]

Identifier: 86609983

GI number: 86609983

Start: 2654319

End: 2655116

Strand: Direct

Name: ssuC [C]

Synonym: CYB_2550

Alternate gene names: 86609983

Gene position: 2654319-2655116 (Clockwise)

Preceding gene: 86609982

Following gene: 86609986

Centisome position: 87.12

GC content: 57.14

Gene sequence:

>798_bases
TTGAATCTGGGCCGTTGGTTCAACCTGGAAGTGATTGCCCCCGTCCTCGTCGGGATCCTCTTCTTGGTGGGCTGGGAAGT
GGCGGTGCGGGTAACGGGAGTGCCCCACTACCTCTTGCCGGGGCCGATTTTGGTGGTGCAAACCCTCATCCGCGACTGGG
GAACGCTTTTTCCTTCCCTGTTGATCACTGTGCAAATTACGGTGGTGGCCTTTTTGGCTGCCACAGTGTCGGGGCTTTTG
GTCGCGATTGTGTTCACCCAGAGCAAGTGGATTGAGCGCAGCTTTTTCCCCTATGCGGTGATTTTACAGACGATGCCCAT
TGTCTCCATCGCCCCGCTGATCATCATTTGGCTGCGCAACAACACCTTTGCCGCGATGGTGGTGTGCGCCTGGATTGTGG
CTTTTTTCCCGATTCTTTCCAACACCACTCTGGGGCTGAACAGCGTCGATCACAACCTGCTCAACCTGTTCCAACTGTAC
AAGGCCAACCGCTGGCAAACGTTGATCTACTTGCGGCTGCCCAGTGCCATGCCCTATTTCATGGGGGGCCTGCGCATCAG
CGGTGGCCTCTCTTTGATTGGGGCGGTGGTGGCGGAGTTTGTTGCCGGTACCGGTGGGCAACGGGCCGGGATTGCTTACC
AGATCTTGATCTCCAGCTTCAACCTGCAGGTGCCCCGCATGTTTGCGGCCTTGATCTTGGTCACCGGCTTGGGGATCCTG
ATCTTCATTTCCTTGAGTGCTCTATCCGACAGGGTGTTGGGCAAGTGGCATGAGAGCGCTGTGCGCCGAGAGAACTGA

Upstream 100 bases:

>100_bases
TCTGCCCAAGCTGACCGGCGCGGTTGAAGAAAAGCTCAGACCCCAACCCACGGATGAGGCAGACATACCGAGTGCCGGCT
CAGGGGTGCCCGCGAAGGGG

Downstream 100 bases:

>100_bases
AAAATTGAACTTTGGTGAAAATTAGGGCCCCCTCTCTAACATCTAGGGTCATTTGGATTCAAACTAGGACGCTGCACCCA
CCCCTAAAACGTTGAACGCA

Product: ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MNLGRWFNLEVIAPVLVGILFLVGWEVAVRVTGVPHYLLPGPILVVQTLIRDWGTLFPSLLITVQITVVAFLAATVSGLL
VAIVFTQSKWIERSFFPYAVILQTMPIVSIAPLIIIWLRNNTFAAMVVCAWIVAFFPILSNTTLGLNSVDHNLLNLFQLY
KANRWQTLIYLRLPSAMPYFMGGLRISGGLSLIGAVVAEFVAGTGGQRAGIAYQILISSFNLQVPRMFAALILVTGLGIL
IFISLSALSDRVLGKWHESAVRREN

Sequences:

>Translated_265_residues
MNLGRWFNLEVIAPVLVGILFLVGWEVAVRVTGVPHYLLPGPILVVQTLIRDWGTLFPSLLITVQITVVAFLAATVSGLL
VAIVFTQSKWIERSFFPYAVILQTMPIVSIAPLIIIWLRNNTFAAMVVCAWIVAFFPILSNTTLGLNSVDHNLLNLFQLY
KANRWQTLIYLRLPSAMPYFMGGLRISGGLSLIGAVVAEFVAGTGGQRAGIAYQILISSFNLQVPRMFAALILVTGLGIL
IFISLSALSDRVLGKWHESAVRREN
>Mature_265_residues
MNLGRWFNLEVIAPVLVGILFLVGWEVAVRVTGVPHYLLPGPILVVQTLIRDWGTLFPSLLITVQITVVAFLAATVSGLL
VAIVFTQSKWIERSFFPYAVILQTMPIVSIAPLIIIWLRNNTFAAMVVCAWIVAFFPILSNTTLGLNSVDHNLLNLFQLY
KANRWQTLIYLRLPSAMPYFMGGLRISGGLSLIGAVVAEFVAGTGGQRAGIAYQILISSFNLQVPRMFAALILVTGLGIL
IFISLSALSDRVLGKWHESAVRREN

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=255, Percent_Identity=26.2745098039216, Blast_Score=67, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29180; Mature: 29180

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLGRWFNLEVIAPVLVGILFLVGWEVAVRVTGVPHYLLPGPILVVQTLIRDWGTLFPSL
CCCCCEECHHHHHHHHHHHHHHHHHHHEEEEECCCCHHCCCHHHHHHHHHHHHHHHHHHH
LITVQITVVAFLAATVSGLLVAIVFTQSKWIERSFFPYAVILQTMPIVSIAPLIIIWLRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHEEEECC
NTFAAMVVCAWIVAFFPILSNTTLGLNSVDHNLLNLFQLYKANRWQTLIYLRLPSAMPYF
CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHH
MGGLRISGGLSLIGAVVAEFVAGTGGQRAGIAYQILISSFNLQVPRMFAALILVTGLGIL
HCCEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHEEHHHCCCCHHHHHHHHHHHHHHHHH
IFISLSALSDRVLGKWHESAVRREN
HHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNLGRWFNLEVIAPVLVGILFLVGWEVAVRVTGVPHYLLPGPILVVQTLIRDWGTLFPSL
CCCCCEECHHHHHHHHHHHHHHHHHHHEEEEECCCCHHCCCHHHHHHHHHHHHHHHHHHH
LITVQITVVAFLAATVSGLLVAIVFTQSKWIERSFFPYAVILQTMPIVSIAPLIIIWLRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHEEEECC
NTFAAMVVCAWIVAFFPILSNTTLGLNSVDHNLLNLFQLYKANRWQTLIYLRLPSAMPYF
CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHH
MGGLRISGGLSLIGAVVAEFVAGTGGQRAGIAYQILISSFNLQVPRMFAALILVTGLGIL
HCCEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHEEHHHCCCCHHHHHHHHHHHHHHHHH
IFISLSALSDRVLGKWHESAVRREN
HHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]