Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609979

Identifier: 86609979

GI number: 86609979

Start: 2650458

End: 2650775

Strand: Direct

Name: 86609979

Synonym: CYB_2546

Alternate gene names: NA

Gene position: 2650458-2650775 (Clockwise)

Preceding gene: 86609978

Following gene: 86609982

Centisome position: 86.99

GC content: 61.01

Gene sequence:

>318_bases
ATGCTGGCCGCACAAATCACCTTGCTGGTCTACGGGGCACTGCTTTTGGTGGGCGGAGCAATCGGCTATAGCAAAGGCAA
AAGCTCCAAGTCTCTCATCGGGGGGCTGGTTGGGGCCGCCCTCAGCGGAGTCAGCTATGGGCTGCTGGGGGTGGATCCCC
GCTGGGGGCTGGGCTTGGGCCTGGGGACGACAGTGCTGGGATCTATCGTATTCGCCCTGCGCTACCGCAAAACCCGAACG
TTAATGCCTGCCGGCTTGATGTTCATCCTCAGCTTGGGAGCAGCTGTCCTTCTGGGACTTAGCTTTGGAGCGGCCTAG

Upstream 100 bases:

>100_bases
TGTCGATGCCTCAATTCTCAATCGCTACATCAGCATTCGCTTGCCCTTGATTCGCGATATCCTTGTGGATTAAGCCCGGA
GAGGACAAGGTTTTCCCATC

Downstream 100 bases:

>100_bases
GCGACTTCTGGTTGCGCCGGTGGGGTGAAGTTTGTTGAACATTCGATGTAGTCAATTTCGATGTAGTCAATTTTCAGCTC
TCGGCCCGAGCGAATCTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MLAAQITLLVYGALLLVGGAIGYSKGKSSKSLIGGLVGAALSGVSYGLLGVDPRWGLGLGLGTTVLGSIVFALRYRKTRT
LMPAGLMFILSLGAAVLLGLSFGAA

Sequences:

>Translated_105_residues
MLAAQITLLVYGALLLVGGAIGYSKGKSSKSLIGGLVGAALSGVSYGLLGVDPRWGLGLGLGTTVLGSIVFALRYRKTRT
LMPAGLMFILSLGAAVLLGLSFGAA
>Mature_105_residues
MLAAQITLLVYGALLLVGGAIGYSKGKSSKSLIGGLVGAALSGVSYGLLGVDPRWGLGLGLGTTVLGSIVFALRYRKTRT
LMPAGLMFILSLGAAVLLGLSFGAA

Specific function: Unknown

COG id: COG5548

COG function: function code S; Small integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10512; Mature: 10512

Theoretical pI: Translated: 10.96; Mature: 10.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAAQITLLVYGALLLVGGAIGYSKGKSSKSLIGGLVGAALSGVSYGLLGVDPRWGLGLG
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
LGTTVLGSIVFALRYRKTRTLMPAGLMFILSLGAAVLLGLSFGAA
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLAAQITLLVYGALLLVGGAIGYSKGKSSKSLIGGLVGAALSGVSYGLLGVDPRWGLGLG
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
LGTTVLGSIVFALRYRKTRTLMPAGLMFILSLGAAVLLGLSFGAA
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA