| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609907
Identifier: 86609907
GI number: 86609907
Start: 2570300
End: 2570743
Strand: Direct
Name: 86609907
Synonym: CYB_2472
Alternate gene names: NA
Gene position: 2570300-2570743 (Clockwise)
Preceding gene: 86609905
Following gene: 86609908
Centisome position: 84.36
GC content: 58.56
Gene sequence:
>444_bases ATGTCGGGATCCCGGTACAGCCAAGAGGACGTGCAGCAGATCCTCCAGCGGGCCATTGCCCGCCAGCCACGCCTGGGCGA GTTCACCCGCTCCCAACTGCAGGAGATGGCTGCCGAACTGGGGATCTCCCCCCAAGAGCTGGACTTGGCCGAGCAGGAAT GGAAGGCCTGGCAAGAGCTGAACAGCCAACACCGAGAATTCCAGCGCTACCGCCGTCGGCAGTTTTACCAACTGCTGGGC CGCTATGGAATTGTCAACAGCTTTTTGCTGGGCTTAGACTGGCTCTCCGGTGGAGGGCTATCTTGGTCGCTGTTTATACT CATGGGGTGGGGCTTGACCGTTGCCCTCAAGGGCTGGAACGCCTACCAAACGGAGGGTGAACGCTACGAGAAAGAGTTTC GCCAATGGCAAAGGAAACGCCAGAAAGATCTCCAGAGCAAGTAA
Upstream 100 bases:
>100_bases GGTTGGGATCCCGCGGCGGAGGGAGCTTCATAAGGCGCAAGATCCAGCTAGCCCAAACTAAGAGATATAAAGTTTACGAA GTTATATGTAAGTCAGCCAA
Downstream 100 bases:
>100_bases GCCCAGCCTACCGGAGAAGTCTGTCCCGCTGATGGAGATGGATTTTTCTCCAAACTCTGAGTGGGAAGGGGCACCGCCGA GAGATGCTACCATAGATATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSGSRYSQEDVQQILQRAIARQPRLGEFTRSQLQEMAAELGISPQELDLAEQEWKAWQELNSQHREFQRYRRRQFYQLLG RYGIVNSFLLGLDWLSGGGLSWSLFILMGWGLTVALKGWNAYQTEGERYEKEFRQWQRKRQKDLQSK
Sequences:
>Translated_147_residues MSGSRYSQEDVQQILQRAIARQPRLGEFTRSQLQEMAAELGISPQELDLAEQEWKAWQELNSQHREFQRYRRRQFYQLLG RYGIVNSFLLGLDWLSGGGLSWSLFILMGWGLTVALKGWNAYQTEGERYEKEFRQWQRKRQKDLQSK >Mature_146_residues SGSRYSQEDVQQILQRAIARQPRLGEFTRSQLQEMAAELGISPQELDLAEQEWKAWQELNSQHREFQRYRRRQFYQLLGR YGIVNSFLLGLDWLSGGGLSWSLFILMGWGLTVALKGWNAYQTEGERYEKEFRQWQRKRQKDLQSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17521; Mature: 17390
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGSRYSQEDVQQILQRAIARQPRLGEFTRSQLQEMAAELGISPQELDLAEQEWKAWQEL CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH NSQHREFQRYRRRQFYQLLGRYGIVNSFLLGLDWLSGGGLSWSLFILMGWGLTVALKGWN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEECCCC AYQTEGERYEKEFRQWQRKRQKDLQSK HHHCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SGSRYSQEDVQQILQRAIARQPRLGEFTRSQLQEMAAELGISPQELDLAEQEWKAWQEL CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH NSQHREFQRYRRRQFYQLLGRYGIVNSFLLGLDWLSGGGLSWSLFILMGWGLTVALKGWN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEECCCC AYQTEGERYEKEFRQWQRKRQKDLQSK HHHCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA