Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609890

Identifier: 86609890

GI number: 86609890

Start: 2554733

End: 2555314

Strand: Direct

Name: 86609890

Synonym: CYB_2455

Alternate gene names: NA

Gene position: 2554733-2555314 (Clockwise)

Preceding gene: 86609888

Following gene: 86609893

Centisome position: 83.85

GC content: 62.37

Gene sequence:

>582_bases
GTGACACCCAAGTCTTCTTCCCGTACCCCGGCTCGCCACGTGTCTATGCGTGCAGAGCAGGTTGCTGGGCCGCGGCTGGA
CATCTCTGTTGCTCCACGAGTGCATCGCTCCCAAGGGCAGGGATCCCTGGTTCGGGCAGGGTTTCCCTCCTCTCTCCCAA
TTTCCGGTCGGCGGACGATCCCTGTCCAGCGCTCCCGCCGGCGCGGACGGCAAGAACCTGGCCACGAGCCTCAAGTCTGG
GAGATGGCCTGTCACATCGGGGTGAATGTCTTGTTTACGGCGGCTGCCCTCAGTGGTTTGTATCGCCTCTTGCCGGTGCA
GTTGGCCCAGCATCACCGGCTCCAGGTTCTGGAGCGGCATATCGAGGTCTTGTCCACTCGGATTTCTCGGCTGCAGGAGG
GGGTGGATCGAGGTATGGATCCCTTGCAGCAGGAGGCCCTGATCAAGGAACGGCTGAATCGGGTGCCACGCAATCAAATT
CAGGTGCGTTTGGTGGATCCCAGTACCTGGGTGGCGGACGACGAGAAGAACACCCACCCTTCCTGGATCGGGCAGTCCAC
CCAGCCGTCTGCCAGGCCGTAG

Upstream 100 bases:

>100_bases
GTAAGCTGACACACCTGGAAAAATCGGCTTCAATAGGCCCTAGCTGCGCTTCTTGGCAGCAGAGGTGGTTCATCGTCCCC
CTATTTTCTTCCCTTCACCC

Downstream 100 bases:

>100_bases
GCTGCCTCTGCCTAGGCTTGTTTGAGAAGCAAGGCCACCTCTTTGGCAAAGTAGGTGAGGATGATATCGGCGCCAGCCCG
CTTCATGGCCAGCAGGGATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MTPKSSSRTPARHVSMRAEQVAGPRLDISVAPRVHRSQGQGSLVRAGFPSSLPISGRRTIPVQRSRRRGRQEPGHEPQVW
EMACHIGVNVLFTAAALSGLYRLLPVQLAQHHRLQVLERHIEVLSTRISRLQEGVDRGMDPLQQEALIKERLNRVPRNQI
QVRLVDPSTWVADDEKNTHPSWIGQSTQPSARP

Sequences:

>Translated_193_residues
MTPKSSSRTPARHVSMRAEQVAGPRLDISVAPRVHRSQGQGSLVRAGFPSSLPISGRRTIPVQRSRRRGRQEPGHEPQVW
EMACHIGVNVLFTAAALSGLYRLLPVQLAQHHRLQVLERHIEVLSTRISRLQEGVDRGMDPLQQEALIKERLNRVPRNQI
QVRLVDPSTWVADDEKNTHPSWIGQSTQPSARP
>Mature_192_residues
TPKSSSRTPARHVSMRAEQVAGPRLDISVAPRVHRSQGQGSLVRAGFPSSLPISGRRTIPVQRSRRRGRQEPGHEPQVWE
MACHIGVNVLFTAAALSGLYRLLPVQLAQHHRLQVLERHIEVLSTRISRLQEGVDRGMDPLQQEALIKERLNRVPRNQIQ
VRLVDPSTWVADDEKNTHPSWIGQSTQPSARP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21703; Mature: 21572

Theoretical pI: Translated: 12.02; Mature: 12.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPKSSSRTPARHVSMRAEQVAGPRLDISVAPRVHRSQGQGSLVRAGFPSSLPISGRRTI
CCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHCCCCCCCEEECCCCCCCCCCCCCCC
PVQRSRRRGRQEPGHEPQVWEMACHIGVNVLFTAAALSGLYRLLPVQLAQHHRLQVLERH
CCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEVLSTRISRLQEGVDRGMDPLQQEALIKERLNRVPRNQIQVRLVDPSTWVADDEKNTHP
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCC
SWIGQSTQPSARP
CCCCCCCCCCCCC
>Mature Secondary Structure 
TPKSSSRTPARHVSMRAEQVAGPRLDISVAPRVHRSQGQGSLVRAGFPSSLPISGRRTI
CCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHCCCCCCCEEECCCCCCCCCCCCCCC
PVQRSRRRGRQEPGHEPQVWEMACHIGVNVLFTAAALSGLYRLLPVQLAQHHRLQVLERH
CCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEVLSTRISRLQEGVDRGMDPLQQEALIKERLNRVPRNQIQVRLVDPSTWVADDEKNTHP
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCC
SWIGQSTQPSARP
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA