| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609835
Identifier: 86609835
GI number: 86609835
Start: 2497103
End: 2497912
Strand: Direct
Name: 86609835
Synonym: CYB_2397
Alternate gene names: NA
Gene position: 2497103-2497912 (Clockwise)
Preceding gene: 86609833
Following gene: 86609836
Centisome position: 81.96
GC content: 59.14
Gene sequence:
>810_bases TTGGAACTCTCCTCTGCCGGCAGTCGTCTAAGAAGACGAGGCGTTTTAGGCTTTTTTCTGTCTACCCACTGCTGCTCTAT GACTCAGTTTGAGCTGCCTCCCTCCCCTTCCGAGAAACCTGGCCGGCACAGCTTGGTTTGGTTGGTGGCTGCTGCAGGTC TGACGGTCTTGCTCTGGCAGCTCCCCTGGGGCAACTATATCCTCTACCCCTTTACGATTCTGGCCACCTGGTTTCATGAG ATGGGCCACGGCTTGACGGCAGTGCTGTTGGGTGGGGAGTTTCATCGTCTGGAGATCTATCCCGACGGCTCGGGGCTGGC CATTCACAGTGGCGAGCTGTTTTTGGGACGGGTGGGGCAAGCTTTGGTGGCCGCTGCTGGGCCGATGGGGCCGCCGCTGG CTGGGGCCCTGTTCATCCTTGCCTCCCGCCGCCACAGCACAACTCGGTTGGGGCTGGTACTTCTGGGATCCCTGCTGTTG CTATCGACGCTGCTCTGGGTTCGCTCTCCCTTTGGCCTCCTGTTCCTCTTGGGTATGGGTTTGGGGATCCTGGCGGTAGC TCGCTGGGCCTCCCCCTGGCTGCGGGGCTTCGCTGCACAATTTTTGGGGGTGCAGGCCTGTGTGAGCACCTACCACCAGC TTGACTACTTATTTACGGCCTCTGCCGTGATCAATGGTCAGGTGATCCACTCCGATTCCAGCCAGATTGCCCAAAACTTG TTCTTGCCCTACTGGTTTTGGGGAGGGGTGATGGCGGTCTCTTCTTTGGTGCTGCTGATAACCAGCTTGCAGCTGACGTT CCGGGACTAG
Upstream 100 bases:
>100_bases ACAGACAGGGATCCCTCAGAGTCTTTTTCAGCCTACCTGACCTACATCCATTGCAAACTGGTTTGAGACATATGTTTTTC TGGATTTTCTCGGGGTTGGC
Downstream 100 bases:
>100_bases CCGGCAGGGGGCAAAGCCGCAATTTTGGCAGTGGTTCGTGTTATGTAAAAATCCGTCCTCTATCCCTGCCAAGTCGAGAA AACCGCCGCTACAGTAATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MELSSAGSRLRRRGVLGFFLSTHCCSMTQFELPPSPSEKPGRHSLVWLVAAAGLTVLLWQLPWGNYILYPFTILATWFHE MGHGLTAVLLGGEFHRLEIYPDGSGLAIHSGELFLGRVGQALVAAAGPMGPPLAGALFILASRRHSTTRLGLVLLGSLLL LSTLLWVRSPFGLLFLLGMGLGILAVARWASPWLRGFAAQFLGVQACVSTYHQLDYLFTASAVINGQVIHSDSSQIAQNL FLPYWFWGGVMAVSSLVLLITSLQLTFRD
Sequences:
>Translated_269_residues MELSSAGSRLRRRGVLGFFLSTHCCSMTQFELPPSPSEKPGRHSLVWLVAAAGLTVLLWQLPWGNYILYPFTILATWFHE MGHGLTAVLLGGEFHRLEIYPDGSGLAIHSGELFLGRVGQALVAAAGPMGPPLAGALFILASRRHSTTRLGLVLLGSLLL LSTLLWVRSPFGLLFLLGMGLGILAVARWASPWLRGFAAQFLGVQACVSTYHQLDYLFTASAVINGQVIHSDSSQIAQNL FLPYWFWGGVMAVSSLVLLITSLQLTFRD >Mature_269_residues MELSSAGSRLRRRGVLGFFLSTHCCSMTQFELPPSPSEKPGRHSLVWLVAAAGLTVLLWQLPWGNYILYPFTILATWFHE MGHGLTAVLLGGEFHRLEIYPDGSGLAIHSGELFLGRVGQALVAAAGPMGPPLAGALFILASRRHSTTRLGLVLLGSLLL LSTLLWVRSPFGLLFLLGMGLGILAVARWASPWLRGFAAQFLGVQACVSTYHQLDYLFTASAVINGQVIHSDSSQIAQNL FLPYWFWGGVMAVSSLVLLITSLQLTFRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29277; Mature: 29277
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELSSAGSRLRRRGVLGFFLSTHCCSMTQFELPPSPSEKPGRHSLVWLVAAAGLTVLLWQ CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEE LPWGNYILYPFTILATWFHEMGHGLTAVLLGGEFHRLEIYPDGSGLAIHSGELFLGRVGQ CCCCCEEHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEEECCCCEEEECCCHHHHHHHH ALVAAAGPMGPPLAGALFILASRRHSTTRLGLVLLGSLLLLSTLLWVRSPFGLLFLLGMG HHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LGILAVARWASPWLRGFAAQFLGVQACVSTYHQLDYLFTASAVINGQVIHSDSSQIAQNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHH FLPYWFWGGVMAVSSLVLLITSLQLTFRD CHHHHHHHHHHHHHHHHHHHHHHHHEECC >Mature Secondary Structure MELSSAGSRLRRRGVLGFFLSTHCCSMTQFELPPSPSEKPGRHSLVWLVAAAGLTVLLWQ CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEE LPWGNYILYPFTILATWFHEMGHGLTAVLLGGEFHRLEIYPDGSGLAIHSGELFLGRVGQ CCCCCEEHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEEECCCCEEEECCCHHHHHHHH ALVAAAGPMGPPLAGALFILASRRHSTTRLGLVLLGSLLLLSTLLWVRSPFGLLFLLGMG HHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LGILAVARWASPWLRGFAAQFLGVQACVSTYHQLDYLFTASAVINGQVIHSDSSQIAQNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHH FLPYWFWGGVMAVSSLVLLITSLQLTFRD CHHHHHHHHHHHHHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA