| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609788
Identifier: 86609788
GI number: 86609788
Start: 2455814
End: 2456710
Strand: Direct
Name: 86609788
Synonym: CYB_2349
Alternate gene names: NA
Gene position: 2455814-2456710 (Clockwise)
Preceding gene: 86609787
Following gene: 86609793
Centisome position: 80.61
GC content: 58.86
Gene sequence:
>897_bases ATGCTCTCCCGCTCCTCTTGGGTTTCAGGTGCCGCTGCCGTGGGGAGCGGGATCTTTGTTTTCGCCCTGGTGGTGGGGCT GCTGGATCAGATCCTGCCCACCCTGCCCAAGGTTTCCCTCTCCCTGGCCGGGATCCCTGGGATCCTGGCTGCCGCTGGGG CCTCCTATGGGGCCTGGCGGGTGGTTCAGATGGGTCTGCAATCGGCTTCCTGGAGCGACTTTCGAGAATCGCTGGTGGCG ACCCTATCTCCCTTTGATCCTGCCGACCACGGCGGCGAGCCACGACAACCTAAGGGGGATCCTCGCCCTTGGCAGGTGGC TCAGGAGATCCGGCAAACCCAGCTCCGCCATCAAAAGATCCTTGACCGCATCAAGCAGCGGGTGAAAGCCGAAATCCAGA CCTGTGAACGCGCCCAAGCCCAACTGCGCAGCGAGCAGCAACGGTCTCGAGTCCTGCAGGCCCAAGCCCAACAGTTACAA CAGCATCTGCAAAACCTACAAACATCTTCCCCTTCTCCAAGCTCCGAGTCGACCAAACCCACGCCAGAGCAAGCGCTGCG CCAAAAGCTCCGCCAACTTCAATCCCAGGTCACCACCCTGAAAATAGAATTGGAACGCCAAAGGACCCAACTGCAACACG CAGAAGCAGAGCGGGCTCAACTCCAGCAGCAGCAGCAAAAACTCAAGCGCATCCTGCAGCGCAAAAAATTGGAAAATCGA GAGTTGCGCTCCCAACAGGCAGAATGGGCCCGGCAACTGGAGCAAACTCAACAGGAGCTGCAAACTTTGCGAGAGTCCTA CCGCGCCTTGCAAGTTCTCCAGGAAATAGGCTTCACCCTAACCCAAAACCCATCTCACGAAAGGGCGGAAACGGAGTCCT CTGGATCCTCCGACTAG
Upstream 100 bases:
>100_bases GAGGGAAACAGAGGCTGCTGGCGGGATAAACTGAGTGCAGACAGGCAATTTTTGAACCTGGTTTTCCCGCTCTAGCGGTT GTGATGACGAAAAAACGATG
Downstream 100 bases:
>100_bases CCGACCCGCTTTAGAACAAATACACTCCCCTCGCTGCCCCGACCCAGCCGCAAGTCTTCATCTAAATAGGTGATATCCAG CCAACCCGTTGGCTCGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MLSRSSWVSGAAAVGSGIFVFALVVGLLDQILPTLPKVSLSLAGIPGILAAAGASYGAWRVVQMGLQSASWSDFRESLVA TLSPFDPADHGGEPRQPKGDPRPWQVAQEIRQTQLRHQKILDRIKQRVKAEIQTCERAQAQLRSEQQRSRVLQAQAQQLQ QHLQNLQTSSPSPSSESTKPTPEQALRQKLRQLQSQVTTLKIELERQRTQLQHAEAERAQLQQQQQKLKRILQRKKLENR ELRSQQAEWARQLEQTQQELQTLRESYRALQVLQEIGFTLTQNPSHERAETESSGSSD
Sequences:
>Translated_298_residues MLSRSSWVSGAAAVGSGIFVFALVVGLLDQILPTLPKVSLSLAGIPGILAAAGASYGAWRVVQMGLQSASWSDFRESLVA TLSPFDPADHGGEPRQPKGDPRPWQVAQEIRQTQLRHQKILDRIKQRVKAEIQTCERAQAQLRSEQQRSRVLQAQAQQLQ QHLQNLQTSSPSPSSESTKPTPEQALRQKLRQLQSQVTTLKIELERQRTQLQHAEAERAQLQQQQQKLKRILQRKKLENR ELRSQQAEWARQLEQTQQELQTLRESYRALQVLQEIGFTLTQNPSHERAETESSGSSD >Mature_298_residues MLSRSSWVSGAAAVGSGIFVFALVVGLLDQILPTLPKVSLSLAGIPGILAAAGASYGAWRVVQMGLQSASWSDFRESLVA TLSPFDPADHGGEPRQPKGDPRPWQVAQEIRQTQLRHQKILDRIKQRVKAEIQTCERAQAQLRSEQQRSRVLQAQAQQLQ QHLQNLQTSSPSPSSESTKPTPEQALRQKLRQLQSQVTTLKIELERQRTQLQHAEAERAQLQQQQQKLKRILQRKKLENR ELRSQQAEWARQLEQTQQELQTLRESYRALQVLQEIGFTLTQNPSHERAETESSGSSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33626; Mature: 33626
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSRSSWVSGAAAVGSGIFVFALVVGLLDQILPTLPKVSLSLAGIPGILAAAGASYGAWR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHCCCHHHHH VVQMGLQSASWSDFRESLVATLSPFDPADHGGEPRQPKGDPRPWQVAQEIRQTQLRHQKI HHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LDRIKQRVKAEIQTCERAQAQLRSEQQRSRVLQAQAQQLQQHLQNLQTSSPSPSSESTKP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC TPEQALRQKLRQLQSQVTTLKIELERQRTQLQHAEAERAQLQQQQQKLKRILQRKKLENR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELRSQQAEWARQLEQTQQELQTLRESYRALQVLQEIGFTLTQNPSHERAETESSGSSD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCC >Mature Secondary Structure MLSRSSWVSGAAAVGSGIFVFALVVGLLDQILPTLPKVSLSLAGIPGILAAAGASYGAWR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHCCCHHHHH VVQMGLQSASWSDFRESLVATLSPFDPADHGGEPRQPKGDPRPWQVAQEIRQTQLRHQKI HHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LDRIKQRVKAEIQTCERAQAQLRSEQQRSRVLQAQAQQLQQHLQNLQTSSPSPSSESTKP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC TPEQALRQKLRQLQSQVTTLKIELERQRTQLQHAEAERAQLQQQQQKLKRILQRKKLENR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELRSQQAEWARQLEQTQQELQTLRESYRALQVLQEIGFTLTQNPSHERAETESSGSSD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA