Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609743

Identifier: 86609743

GI number: 86609743

Start: 2409410

End: 2410498

Strand: Direct

Name: 86609743

Synonym: CYB_2302

Alternate gene names: NA

Gene position: 2409410-2410498 (Clockwise)

Preceding gene: 86609742

Following gene: 86609744

Centisome position: 79.08

GC content: 55.92

Gene sequence:

>1089_bases
TTGGAGTTTTATCTCTTCAAAGAGATGATCCGCCCCTTCTTTCTGGGGGTGGCCGGGGGGACGGTGATGATGCTGGGCAA
CCAGCTGTTTATCTACACCGATCTGCTGGTGAAAAAGGGCGCCCCTCCCCTGACCATTTTGCACATTCTCCTCCTCAATT
TGCCCGCCATTTTGGTGGTCACCTTTCCCATTGCCGGCCTCTTTACCACCTTGCTCACCCTGGGCAAAATGGGAGCCGAC
AGCGAGATCACCGCCCTGCGTGCTGCTGGGATCCCCTATCGCAAAGTGTTTATCCCCGTGCTCTGTATTGGCCTGCTGAT
CAGCGGCTTGGCGCTGTTGACCAATGAAGTGATTGTGCCGGAAACCAACCAAAAGGTGAAAATCCTGAACAAGAACCTCA
TCTTGGCTCAAGATGCTCTTTTGTTTAATCCAGAAGAGATCGTGCGGGTGGATGATGATCTCTGGTTTCATGTCGGATCG
ATTGACCCGAAGACCGGCTTGATGCAGGATTTGTTGATCCTGGATCGCAAAGCTGAGACCGGCCACCTGCGCTATCCGCA
GGTGATCTCCGCTCAAACCGCGCAGCAGGTGGGCCAATCGTGGCAACTGCGAGATGTGGTGATCCGCCGTTATGACGAGC
AGGGGCGCACCTACTATGAAGGCCAGGTGGAAGAAATGCAGCTCAACATCGTCAACAAACTGGTGGGCCTGGTGTACGCG
GAAAAGGTGCCCCAAGAGCAACGGGCGGGGGAGCTGTGGGAGCAGTGCCAGCGATATCGAGCGGAGCAACGTCCTTCTGC
CGATGTGGCTCGCTGCCTGACGGAATACCACCTCAAGTTCGCCATTCCTTTGGCCAGCTTTTTCGCCATCTTGGTGGCTG
CCCCCTTGGGCCTGCAAACGGTGCGGCAAACGGGGCGCTACGGCGGCGTGGCGCTAGCGATTGTTCTGGTGTTTATTTAC
TATGTACTGATGAGCCTGGGACGAGCGATGGGTCGAGTTGAGCACATCGATCCCTGGCTGGCTGCCTGGTTGCCGAATAT
GATTTTCGGTGGGGTGGGCTTCTCTTTACTGTGGCGGTTTTTACGGTGA

Upstream 100 bases:

>100_bases
AGGTGATGTCATGACGGCTCCACTCGCCGAGGGCAAACTGCGCAGAACCCCTGCTCAAGCGGGCAGCTTTTGGGGATCCC
TGAGATTGGGAGCTGCCTTT

Downstream 100 bases:

>100_bases
AATCCTGCAACTTCCCCCCTGACTTCAGCCCTTGGGCAAAGTGGTTGGCTCTTTGCTGGGGCGGCTCCCTGTGGTTGGGG
ACGGGGGAGGCCGTCTTCGC

Product: YjgP/YjgQ permease

Products: NA

Alternate protein names: Permease; Permease YjgP/YjgQ; Permease YjgP/YjgQ Family; YjgP/YjgQ Family Protein; Permease Family Protein; YjgP/YjgQ Permease Superfamily; YjgP/YjgQ Family Permease; Permease Yjgp/Yjgq Family Protein; YjgP/YjgQ Permease

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MEFYLFKEMIRPFFLGVAGGTVMMLGNQLFIYTDLLVKKGAPPLTILHILLLNLPAILVVTFPIAGLFTTLLTLGKMGAD
SEITALRAAGIPYRKVFIPVLCIGLLISGLALLTNEVIVPETNQKVKILNKNLILAQDALLFNPEEIVRVDDDLWFHVGS
IDPKTGLMQDLLILDRKAETGHLRYPQVISAQTAQQVGQSWQLRDVVIRRYDEQGRTYYEGQVEEMQLNIVNKLVGLVYA
EKVPQEQRAGELWEQCQRYRAEQRPSADVARCLTEYHLKFAIPLASFFAILVAAPLGLQTVRQTGRYGGVALAIVLVFIY
YVLMSLGRAMGRVEHIDPWLAAWLPNMIFGGVGFSLLWRFLR

Sequences:

>Translated_362_residues
MEFYLFKEMIRPFFLGVAGGTVMMLGNQLFIYTDLLVKKGAPPLTILHILLLNLPAILVVTFPIAGLFTTLLTLGKMGAD
SEITALRAAGIPYRKVFIPVLCIGLLISGLALLTNEVIVPETNQKVKILNKNLILAQDALLFNPEEIVRVDDDLWFHVGS
IDPKTGLMQDLLILDRKAETGHLRYPQVISAQTAQQVGQSWQLRDVVIRRYDEQGRTYYEGQVEEMQLNIVNKLVGLVYA
EKVPQEQRAGELWEQCQRYRAEQRPSADVARCLTEYHLKFAIPLASFFAILVAAPLGLQTVRQTGRYGGVALAIVLVFIY
YVLMSLGRAMGRVEHIDPWLAAWLPNMIFGGVGFSLLWRFLR
>Mature_362_residues
MEFYLFKEMIRPFFLGVAGGTVMMLGNQLFIYTDLLVKKGAPPLTILHILLLNLPAILVVTFPIAGLFTTLLTLGKMGAD
SEITALRAAGIPYRKVFIPVLCIGLLISGLALLTNEVIVPETNQKVKILNKNLILAQDALLFNPEEIVRVDDDLWFHVGS
IDPKTGLMQDLLILDRKAETGHLRYPQVISAQTAQQVGQSWQLRDVVIRRYDEQGRTYYEGQVEEMQLNIVNKLVGLVYA
EKVPQEQRAGELWEQCQRYRAEQRPSADVARCLTEYHLKFAIPLASFFAILVAAPLGLQTVRQTGRYGGVALAIVLVFIY
YVLMSLGRAMGRVEHIDPWLAAWLPNMIFGGVGFSLLWRFLR

Specific function: Unknown

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40717; Mature: 40717

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFYLFKEMIRPFFLGVAGGTVMMLGNQLFIYTDLLVKKGAPPLTILHILLLNLPAILVV
CCHHHHHHHHHHHHHHHCCCEEEEECCCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
TFPIAGLFTTLLTLGKMGADSEITALRAAGIPYRKVFIPVLCIGLLISGLALLTNEVIVP
HHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEECC
ETNQKVKILNKNLILAQDALLFNPEEIVRVDDDLWFHVGSIDPKTGLMQDLLILDRKAET
CCCCCEEEECCCEEEECHHHHCCHHHHEEECCCCEEEECCCCCCHHHHHHHHHHCCCCCC
GHLRYPQVISAQTAQQVGQSWQLRDVVIRRYDEQGRTYYEGQVEEMQLNIVNKLVGLVYA
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHH
EKVPQEQRAGELWEQCQRYRAEQRPSADVARCLTEYHLKFAIPLASFFAILVAAPLGLQT
HHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
VRQTGRYGGVALAIVLVFIYYVLMSLGRAMGRVEHIDPWLAAWLPNMIFGGVGFSLLWRF
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LR
HC
>Mature Secondary Structure
MEFYLFKEMIRPFFLGVAGGTVMMLGNQLFIYTDLLVKKGAPPLTILHILLLNLPAILVV
CCHHHHHHHHHHHHHHHCCCEEEEECCCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
TFPIAGLFTTLLTLGKMGADSEITALRAAGIPYRKVFIPVLCIGLLISGLALLTNEVIVP
HHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEECC
ETNQKVKILNKNLILAQDALLFNPEEIVRVDDDLWFHVGSIDPKTGLMQDLLILDRKAET
CCCCCEEEECCCEEEECHHHHCCHHHHEEECCCCEEEECCCCCCHHHHHHHHHHCCCCCC
GHLRYPQVISAQTAQQVGQSWQLRDVVIRRYDEQGRTYYEGQVEEMQLNIVNKLVGLVYA
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHH
EKVPQEQRAGELWEQCQRYRAEQRPSADVARCLTEYHLKFAIPLASFFAILVAAPLGLQT
HHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
VRQTGRYGGVALAIVLVFIYYVLMSLGRAMGRVEHIDPWLAAWLPNMIFGGVGFSLLWRF
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LR
HC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA