| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609743
Identifier: 86609743
GI number: 86609743
Start: 2409410
End: 2410498
Strand: Direct
Name: 86609743
Synonym: CYB_2302
Alternate gene names: NA
Gene position: 2409410-2410498 (Clockwise)
Preceding gene: 86609742
Following gene: 86609744
Centisome position: 79.08
GC content: 55.92
Gene sequence:
>1089_bases TTGGAGTTTTATCTCTTCAAAGAGATGATCCGCCCCTTCTTTCTGGGGGTGGCCGGGGGGACGGTGATGATGCTGGGCAA CCAGCTGTTTATCTACACCGATCTGCTGGTGAAAAAGGGCGCCCCTCCCCTGACCATTTTGCACATTCTCCTCCTCAATT TGCCCGCCATTTTGGTGGTCACCTTTCCCATTGCCGGCCTCTTTACCACCTTGCTCACCCTGGGCAAAATGGGAGCCGAC AGCGAGATCACCGCCCTGCGTGCTGCTGGGATCCCCTATCGCAAAGTGTTTATCCCCGTGCTCTGTATTGGCCTGCTGAT CAGCGGCTTGGCGCTGTTGACCAATGAAGTGATTGTGCCGGAAACCAACCAAAAGGTGAAAATCCTGAACAAGAACCTCA TCTTGGCTCAAGATGCTCTTTTGTTTAATCCAGAAGAGATCGTGCGGGTGGATGATGATCTCTGGTTTCATGTCGGATCG ATTGACCCGAAGACCGGCTTGATGCAGGATTTGTTGATCCTGGATCGCAAAGCTGAGACCGGCCACCTGCGCTATCCGCA GGTGATCTCCGCTCAAACCGCGCAGCAGGTGGGCCAATCGTGGCAACTGCGAGATGTGGTGATCCGCCGTTATGACGAGC AGGGGCGCACCTACTATGAAGGCCAGGTGGAAGAAATGCAGCTCAACATCGTCAACAAACTGGTGGGCCTGGTGTACGCG GAAAAGGTGCCCCAAGAGCAACGGGCGGGGGAGCTGTGGGAGCAGTGCCAGCGATATCGAGCGGAGCAACGTCCTTCTGC CGATGTGGCTCGCTGCCTGACGGAATACCACCTCAAGTTCGCCATTCCTTTGGCCAGCTTTTTCGCCATCTTGGTGGCTG CCCCCTTGGGCCTGCAAACGGTGCGGCAAACGGGGCGCTACGGCGGCGTGGCGCTAGCGATTGTTCTGGTGTTTATTTAC TATGTACTGATGAGCCTGGGACGAGCGATGGGTCGAGTTGAGCACATCGATCCCTGGCTGGCTGCCTGGTTGCCGAATAT GATTTTCGGTGGGGTGGGCTTCTCTTTACTGTGGCGGTTTTTACGGTGA
Upstream 100 bases:
>100_bases AGGTGATGTCATGACGGCTCCACTCGCCGAGGGCAAACTGCGCAGAACCCCTGCTCAAGCGGGCAGCTTTTGGGGATCCC TGAGATTGGGAGCTGCCTTT
Downstream 100 bases:
>100_bases AATCCTGCAACTTCCCCCCTGACTTCAGCCCTTGGGCAAAGTGGTTGGCTCTTTGCTGGGGCGGCTCCCTGTGGTTGGGG ACGGGGGAGGCCGTCTTCGC
Product: YjgP/YjgQ permease
Products: NA
Alternate protein names: Permease; Permease YjgP/YjgQ; Permease YjgP/YjgQ Family; YjgP/YjgQ Family Protein; Permease Family Protein; YjgP/YjgQ Permease Superfamily; YjgP/YjgQ Family Permease; Permease Yjgp/Yjgq Family Protein; YjgP/YjgQ Permease
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MEFYLFKEMIRPFFLGVAGGTVMMLGNQLFIYTDLLVKKGAPPLTILHILLLNLPAILVVTFPIAGLFTTLLTLGKMGAD SEITALRAAGIPYRKVFIPVLCIGLLISGLALLTNEVIVPETNQKVKILNKNLILAQDALLFNPEEIVRVDDDLWFHVGS IDPKTGLMQDLLILDRKAETGHLRYPQVISAQTAQQVGQSWQLRDVVIRRYDEQGRTYYEGQVEEMQLNIVNKLVGLVYA EKVPQEQRAGELWEQCQRYRAEQRPSADVARCLTEYHLKFAIPLASFFAILVAAPLGLQTVRQTGRYGGVALAIVLVFIY YVLMSLGRAMGRVEHIDPWLAAWLPNMIFGGVGFSLLWRFLR
Sequences:
>Translated_362_residues MEFYLFKEMIRPFFLGVAGGTVMMLGNQLFIYTDLLVKKGAPPLTILHILLLNLPAILVVTFPIAGLFTTLLTLGKMGAD SEITALRAAGIPYRKVFIPVLCIGLLISGLALLTNEVIVPETNQKVKILNKNLILAQDALLFNPEEIVRVDDDLWFHVGS IDPKTGLMQDLLILDRKAETGHLRYPQVISAQTAQQVGQSWQLRDVVIRRYDEQGRTYYEGQVEEMQLNIVNKLVGLVYA EKVPQEQRAGELWEQCQRYRAEQRPSADVARCLTEYHLKFAIPLASFFAILVAAPLGLQTVRQTGRYGGVALAIVLVFIY YVLMSLGRAMGRVEHIDPWLAAWLPNMIFGGVGFSLLWRFLR >Mature_362_residues MEFYLFKEMIRPFFLGVAGGTVMMLGNQLFIYTDLLVKKGAPPLTILHILLLNLPAILVVTFPIAGLFTTLLTLGKMGAD SEITALRAAGIPYRKVFIPVLCIGLLISGLALLTNEVIVPETNQKVKILNKNLILAQDALLFNPEEIVRVDDDLWFHVGS IDPKTGLMQDLLILDRKAETGHLRYPQVISAQTAQQVGQSWQLRDVVIRRYDEQGRTYYEGQVEEMQLNIVNKLVGLVYA EKVPQEQRAGELWEQCQRYRAEQRPSADVARCLTEYHLKFAIPLASFFAILVAAPLGLQTVRQTGRYGGVALAIVLVFIY YVLMSLGRAMGRVEHIDPWLAAWLPNMIFGGVGFSLLWRFLR
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40717; Mature: 40717
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFYLFKEMIRPFFLGVAGGTVMMLGNQLFIYTDLLVKKGAPPLTILHILLLNLPAILVV CCHHHHHHHHHHHHHHHCCCEEEEECCCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHH TFPIAGLFTTLLTLGKMGADSEITALRAAGIPYRKVFIPVLCIGLLISGLALLTNEVIVP HHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEECC ETNQKVKILNKNLILAQDALLFNPEEIVRVDDDLWFHVGSIDPKTGLMQDLLILDRKAET CCCCCEEEECCCEEEECHHHHCCHHHHEEECCCCEEEECCCCCCHHHHHHHHHHCCCCCC GHLRYPQVISAQTAQQVGQSWQLRDVVIRRYDEQGRTYYEGQVEEMQLNIVNKLVGLVYA CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHH EKVPQEQRAGELWEQCQRYRAEQRPSADVARCLTEYHLKFAIPLASFFAILVAAPLGLQT HHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH VRQTGRYGGVALAIVLVFIYYVLMSLGRAMGRVEHIDPWLAAWLPNMIFGGVGFSLLWRF HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LR HC >Mature Secondary Structure MEFYLFKEMIRPFFLGVAGGTVMMLGNQLFIYTDLLVKKGAPPLTILHILLLNLPAILVV CCHHHHHHHHHHHHHHHCCCEEEEECCCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHH TFPIAGLFTTLLTLGKMGADSEITALRAAGIPYRKVFIPVLCIGLLISGLALLTNEVIVP HHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEECC ETNQKVKILNKNLILAQDALLFNPEEIVRVDDDLWFHVGSIDPKTGLMQDLLILDRKAET CCCCCEEEECCCEEEECHHHHCCHHHHEEECCCCEEEECCCCCCHHHHHHHHHHCCCCCC GHLRYPQVISAQTAQQVGQSWQLRDVVIRRYDEQGRTYYEGQVEEMQLNIVNKLVGLVYA CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHH EKVPQEQRAGELWEQCQRYRAEQRPSADVARCLTEYHLKFAIPLASFFAILVAAPLGLQT HHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH VRQTGRYGGVALAIVLVFIYYVLMSLGRAMGRVEHIDPWLAAWLPNMIFGGVGFSLLWRF HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LR HC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA