Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609736

Identifier: 86609736

GI number: 86609736

Start: 2399770

End: 2400417

Strand: Direct

Name: 86609736

Synonym: CYB_2295

Alternate gene names: NA

Gene position: 2399770-2400417 (Clockwise)

Preceding gene: 86609735

Following gene: 86609737

Centisome position: 78.77

GC content: 55.56

Gene sequence:

>648_bases
ATGCGAACCATCCCTATTGTCAAGTCCGCCATGCAACGGCTAAAGTCCATGCTGCAAAAATCCCTGCGTTCTGCTCCGAC
TTCCCCCGGCTCCAGATCCTCGCTTGTATCCAATGGACGGAGCCTGATCAAGCTGGGCAGCTTTCTGGCCTTGCCTTTGA
TATTCTCGACATTGCCCGCTTGGGCTTTAACAGTGATGGCGCGTCCAGATCTGCGCGACCTCAAACGTGCAACCGTGTTT
CGGGTGGTCAACTACAACACCCTGGTTGTTCAGCTTGAAGGGGATTTGGATTTGCGGCTGGTGCAACTGATTGGGATCGA
TCCCTTGCCTGACCCGATCAACCCCAACTGGACGGAGTTGCGCGGACAAACCCCTCTGGCAGTTTACAATGCCGGCCAAT
ATCTGCAGACTGCTCTGCTGGGACGTGAGGTGTTTTTGGAGTTGGATCCTGCCCTAGCCCCTGCTCCCACCTTGCCTGCC
TACGTTTGGCAAGCCAACACCCTCATCAACCAGGAAATGCTGTTTTTGGGGCACGGCCTGTTGTCGCCACAAACCGATGG
CTTGAAGTACGGCCCCATTCTTACTGAAGCTGCCGATGCAGCCAAAAGACAAGGACGCGGCTATTGGACAACCTACGGCC
CTCGCTAG

Upstream 100 bases:

>100_bases
CTGCCCCAATTTTTTGTAGAGTGACGGCAGGTGAGCCGGATCCCGCGTTGAAGCCCAGTAGGCGGCGGTGTGAGGGCGGT
GTGAGATCCAAAGGTCAAGC

Downstream 100 bases:

>100_bases
AGACCAAGCCAAACCCAGAGCTGGAATTGCCAGCCTGTTTGTTGAGAATAATCTCAACAGCCATCTTCCGCCGGTCGGTG
AGAGCATGACTCTAGTCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MRTIPIVKSAMQRLKSMLQKSLRSAPTSPGSRSSLVSNGRSLIKLGSFLALPLIFSTLPAWALTVMARPDLRDLKRATVF
RVVNYNTLVVQLEGDLDLRLVQLIGIDPLPDPINPNWTELRGQTPLAVYNAGQYLQTALLGREVFLELDPALAPAPTLPA
YVWQANTLINQEMLFLGHGLLSPQTDGLKYGPILTEAADAAKRQGRGYWTTYGPR

Sequences:

>Translated_215_residues
MRTIPIVKSAMQRLKSMLQKSLRSAPTSPGSRSSLVSNGRSLIKLGSFLALPLIFSTLPAWALTVMARPDLRDLKRATVF
RVVNYNTLVVQLEGDLDLRLVQLIGIDPLPDPINPNWTELRGQTPLAVYNAGQYLQTALLGREVFLELDPALAPAPTLPA
YVWQANTLINQEMLFLGHGLLSPQTDGLKYGPILTEAADAAKRQGRGYWTTYGPR
>Mature_215_residues
MRTIPIVKSAMQRLKSMLQKSLRSAPTSPGSRSSLVSNGRSLIKLGSFLALPLIFSTLPAWALTVMARPDLRDLKRATVF
RVVNYNTLVVQLEGDLDLRLVQLIGIDPLPDPINPNWTELRGQTPLAVYNAGQYLQTALLGREVFLELDPALAPAPTLPA
YVWQANTLINQEMLFLGHGLLSPQTDGLKYGPILTEAADAAKRQGRGYWTTYGPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23692; Mature: 23692

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTIPIVKSAMQRLKSMLQKSLRSAPTSPGSRSSLVSNGRSLIKLGSFLALPLIFSTLPA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
WALTVMARPDLRDLKRATVFRVVNYNTLVVQLEGDLDLRLVQLIGIDPLPDPINPNWTEL
HHHHHHCCCCHHHHHHHHHHEEECCCEEEEEECCCCCEEEHEECCCCCCCCCCCCCHHHH
RGQTPLAVYNAGQYLQTALLGREVFLELDPALAPAPTLPAYVWQANTLINQEMLFLGHGL
CCCCCEEEECCHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
LSPQTDGLKYGPILTEAADAAKRQGRGYWTTYGPR
CCCCCCCEEECCHHHHHHHHHHHCCCCEEECCCCC
>Mature Secondary Structure
MRTIPIVKSAMQRLKSMLQKSLRSAPTSPGSRSSLVSNGRSLIKLGSFLALPLIFSTLPA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
WALTVMARPDLRDLKRATVFRVVNYNTLVVQLEGDLDLRLVQLIGIDPLPDPINPNWTEL
HHHHHHCCCCHHHHHHHHHHEEECCCEEEEEECCCCCEEEHEECCCCCCCCCCCCCHHHH
RGQTPLAVYNAGQYLQTALLGREVFLELDPALAPAPTLPAYVWQANTLINQEMLFLGHGL
CCCCCEEEECCHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
LSPQTDGLKYGPILTEAADAAKRQGRGYWTTYGPR
CCCCCCCEEECCHHHHHHHHHHHCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA