| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is mutL [H]
Identifier: 86609718
GI number: 86609718
Start: 2381533
End: 2383281
Strand: Direct
Name: mutL [H]
Synonym: CYB_2276
Alternate gene names: 86609718
Gene position: 2381533-2383281 (Clockwise)
Preceding gene: 86609714
Following gene: 86609719
Centisome position: 78.17
GC content: 63.01
Gene sequence:
>1749_bases ATGTCCAAAATCCAACCCCTGAACCCAGAGCGGATCGCCCAGATGGCCGCGGGAGAGGTGATCGACTCGCTGGGGGCTGC TCTGCGAGAATTGCTGGAAAATGCCCTCGATGCTCAGGCCACCCGCATTCAGGTGGAGATCTGGCCCAGCCGCTGGCAGG TGCGGGTGGCCGATAACGGCCAAGGGATCCCCGCTTCGGAGCTGGAGCAGGTGGCCCGTCGCCACACCACCAGCAAGTTG GACGGTTGCAGCCTGGGGTTTCGGGGCGAAGCCTTGCACAGCCTGGCCCGGCTGGGATCCCTGGCTATCCAAACCCGCCA CGTTTCTGATGCTCACGGCTGGCTGGCCGCCTACGACCGACAGGGGGAGCTGATCCACAAGCAGCCGGCAGCCACTGCCT TGGGAACGGTGGTCACGGTTGCGGATTTGTTTGCCGACTGGCCTCTGCGCCGTCGGGCCTTGCCCCAAACTCGCCCGCTC CTGACCCTGGTGCAGAATGCAGCCCTAGCCCATCCCTGGGTCAGTTGGCAGGTGCATCAGGAAGGGCAATTGCTGCTCAG CCTCTGGCCGGGAAAATCTCTGCAAGATCTGCTGCTGCAGGTGTTGCCGCAGGTGGATCCCACGGATCTGCGCTATCGGC GGATCCAGGATGGGGATAGCGATTGGGAAGTGGTGCTGGGCCTGCCGGATCGCCTGCATCGCCCCCACCCCGATTGGATC CGTGTGGCCGTAAACGGACGGTTTGTGCAGATGCCCGACTGGCAACGGCTGATCCAGTCGGTTTTTCACCACGCGTTGCC TCGCCACCGTCATCCACTGGTGGTTGTTCACCTGCGCCTGCCCCCAGAGCAGGTGGATTGGAACCGTCATCCTGCCAAAA GCGAGCTCTACCTGGAGAATCTGACGGCCCGCCAGGAGCAGTTGCGCCAACACCTGCACTCCCTTCTGCAATTGGGATCC GGGCAAGCCAGCCGCCGCTCTGTGCATCTGATCCGGGCCAGCGAGGCCAAGGTGGTCTATCGAGTCTCGCCCGATTTTCA GAGCCATCTTCCTCCCTCTGACCGCCCAACTTCTCCCTTGCCTCCCCTCAGGGCGCTGGCCCAACTGCATCGGATCTACA TCTTGGCGGAGCATCCCCAGGGGCTATGGCTGGTGGAGCAGCACCTGGCCCACGAGCGAGTTCGCTACGAGTACATCCGG CAGCATTGGCAACTGGTAGCACCGGAGACGCCCATAACGCTGCAAGGACTATCGCCCCAAGCCCTGGAGCGGTTGGAGCA GTTGGGGCTGGAGCCAGAACCCTTTGGCCCCAATACCCATCTCATTCGACGCATCCCTCTGGCTTTAGGGTCGGAAGATC CGGAAGAGGTACAGGGATCCCTGCTGGAGCTCAGTGGTTGTCAAGATTTGCAGGCAGCCCAGGTAACAGTGGCCTGTCGT GGCGCCCTGCGCAACGGGATCCCGCTGACCCTGGAGCAGATGCAAAAGCTGTTGGAAGCTTGGCAGCGCACCGCCAATCC CCACACTTGTCCCCATGGCCGACCGGTGTACCTGGCCCTGGCAGAAAGAGATCTAGCCCGCTACTTCCGCCGCCGTTGGG GTCTCTGCGACCGGCCTATCTCCGACTCCAAACTGGGATCCCTGGGGGAGCTGGATCCGCTGGGAGATAGGTTTGCCGCC CAGGTGCGGCGCTCAAGCGGCTCTTCTGCGTCGGAGCCCACGGACGAGGCCAGTTCTGCCCCACTATAA
Upstream 100 bases:
>100_bases TCCACTGGCAACAGAGGGAGAGAGCTAAGCTAAAGCTCGGCGCTGTTGGCCTTTTGGCGACAAGCTGGCAGGAAGAGAGT CTGCTTTCTCAACTCACTCC
Downstream 100 bases:
>100_bases TCGGGGGTGTCCAACTGCTGAAACCCCTGAAACGCCATGGCTTCTTATCTCAAACTCAAAGCCCAAGAAGAGACCTGGCT GCAGCGCCATTCCCGTCTGA
Product: DNA mismatch repair protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 582; Mature: 581
Protein sequence:
>582_residues MSKIQPLNPERIAQMAAGEVIDSLGAALRELLENALDAQATRIQVEIWPSRWQVRVADNGQGIPASELEQVARRHTTSKL DGCSLGFRGEALHSLARLGSLAIQTRHVSDAHGWLAAYDRQGELIHKQPAATALGTVVTVADLFADWPLRRRALPQTRPL LTLVQNAALAHPWVSWQVHQEGQLLLSLWPGKSLQDLLLQVLPQVDPTDLRYRRIQDGDSDWEVVLGLPDRLHRPHPDWI RVAVNGRFVQMPDWQRLIQSVFHHALPRHRHPLVVVHLRLPPEQVDWNRHPAKSELYLENLTARQEQLRQHLHSLLQLGS GQASRRSVHLIRASEAKVVYRVSPDFQSHLPPSDRPTSPLPPLRALAQLHRIYILAEHPQGLWLVEQHLAHERVRYEYIR QHWQLVAPETPITLQGLSPQALERLEQLGLEPEPFGPNTHLIRRIPLALGSEDPEEVQGSLLELSGCQDLQAAQVTVACR GALRNGIPLTLEQMQKLLEAWQRTANPHTCPHGRPVYLALAERDLARYFRRRWGLCDRPISDSKLGSLGELDPLGDRFAA QVRRSSGSSASEPTDEASSAPL
Sequences:
>Translated_582_residues MSKIQPLNPERIAQMAAGEVIDSLGAALRELLENALDAQATRIQVEIWPSRWQVRVADNGQGIPASELEQVARRHTTSKL DGCSLGFRGEALHSLARLGSLAIQTRHVSDAHGWLAAYDRQGELIHKQPAATALGTVVTVADLFADWPLRRRALPQTRPL LTLVQNAALAHPWVSWQVHQEGQLLLSLWPGKSLQDLLLQVLPQVDPTDLRYRRIQDGDSDWEVVLGLPDRLHRPHPDWI RVAVNGRFVQMPDWQRLIQSVFHHALPRHRHPLVVVHLRLPPEQVDWNRHPAKSELYLENLTARQEQLRQHLHSLLQLGS GQASRRSVHLIRASEAKVVYRVSPDFQSHLPPSDRPTSPLPPLRALAQLHRIYILAEHPQGLWLVEQHLAHERVRYEYIR QHWQLVAPETPITLQGLSPQALERLEQLGLEPEPFGPNTHLIRRIPLALGSEDPEEVQGSLLELSGCQDLQAAQVTVACR GALRNGIPLTLEQMQKLLEAWQRTANPHTCPHGRPVYLALAERDLARYFRRRWGLCDRPISDSKLGSLGELDPLGDRFAA QVRRSSGSSASEPTDEASSAPL >Mature_581_residues SKIQPLNPERIAQMAAGEVIDSLGAALRELLENALDAQATRIQVEIWPSRWQVRVADNGQGIPASELEQVARRHTTSKLD GCSLGFRGEALHSLARLGSLAIQTRHVSDAHGWLAAYDRQGELIHKQPAATALGTVVTVADLFADWPLRRRALPQTRPLL TLVQNAALAHPWVSWQVHQEGQLLLSLWPGKSLQDLLLQVLPQVDPTDLRYRRIQDGDSDWEVVLGLPDRLHRPHPDWIR VAVNGRFVQMPDWQRLIQSVFHHALPRHRHPLVVVHLRLPPEQVDWNRHPAKSELYLENLTARQEQLRQHLHSLLQLGSG QASRRSVHLIRASEAKVVYRVSPDFQSHLPPSDRPTSPLPPLRALAQLHRIYILAEHPQGLWLVEQHLAHERVRYEYIRQ HWQLVAPETPITLQGLSPQALERLEQLGLEPEPFGPNTHLIRRIPLALGSEDPEEVQGSLLELSGCQDLQAAQVTVACRG ALRNGIPLTLEQMQKLLEAWQRTANPHTCPHGRPVYLALAERDLARYFRRRWGLCDRPISDSKLGSLGELDPLGDRFAAQ VRRSSGSSASEPTDEASSAPL
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family [H]
Homologues:
Organism=Homo sapiens, GI4557757, Length=334, Percent_Identity=27.8443113772455, Blast_Score=139, Evalue=5e-33, Organism=Homo sapiens, GI310128478, Length=334, Percent_Identity=28.4431137724551, Blast_Score=113, Evalue=4e-25, Organism=Homo sapiens, GI4505913, Length=334, Percent_Identity=28.4431137724551, Blast_Score=113, Evalue=5e-25, Organism=Homo sapiens, GI189458898, Length=314, Percent_Identity=24.5222929936306, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI4505911, Length=314, Percent_Identity=24.5222929936306, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI189458896, Length=308, Percent_Identity=24.3506493506494, Blast_Score=94, Evalue=4e-19, Organism=Homo sapiens, GI91992162, Length=213, Percent_Identity=28.169014084507, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI91992160, Length=213, Percent_Identity=28.169014084507, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI310128480, Length=283, Percent_Identity=27.208480565371, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI263191589, Length=240, Percent_Identity=23.75, Blast_Score=80, Evalue=4e-15, Organism=Escherichia coli, GI1790612, Length=329, Percent_Identity=29.1793313069909, Blast_Score=115, Evalue=6e-27, Organism=Caenorhabditis elegans, GI17562796, Length=343, Percent_Identity=27.6967930029155, Blast_Score=130, Evalue=3e-30, Organism=Caenorhabditis elegans, GI71991825, Length=321, Percent_Identity=25.8566978193146, Blast_Score=98, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6323819, Length=331, Percent_Identity=29.0030211480363, Blast_Score=130, Evalue=7e-31, Organism=Saccharomyces cerevisiae, GI6324247, Length=343, Percent_Identity=26.8221574344023, Blast_Score=102, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6325093, Length=345, Percent_Identity=22.0289855072464, Blast_Score=87, Evalue=8e-18, Organism=Drosophila melanogaster, GI17136968, Length=332, Percent_Identity=29.5180722891566, Blast_Score=134, Evalue=2e-31, Organism=Drosophila melanogaster, GI17136970, Length=160, Percent_Identity=35.625, Blast_Score=108, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C [H]
EC number: NA
Molecular weight: Translated: 65565; Mature: 65433
Theoretical pI: Translated: 7.86; Mature: 7.86
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIQPLNPERIAQMAAGEVIDSLGAALRELLENALDAQATRIQVEIWPSRWQVRVADNG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCEEEEECCCC QGIPASELEQVARRHTTSKLDGCSLGFRGEALHSLARLGSLAIQTRHVSDAHGWLAAYDR CCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCHHEEECC QGELIHKQPAATALGTVVTVADLFADWPLRRRALPQTRPLLTLVQNAALAHPWVSWQVHQ CCCEECCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHCCCCCEEEECC EGQLLLSLWPGKSLQDLLLQVLPQVDPTDLRYRRIQDGDSDWEVVLGLPDRLHRPHPDWI CCCEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCCCCEEEEECCHHHCCCCCCEE RVAVNGRFVQMPDWQRLIQSVFHHALPRHRHPLVVVHLRLPPEQVDWNRHPAKSELYLEN EEEECCEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHCCCCCCCCCHHHHHHH LTARQEQLRQHLHSLLQLGSGQASRRSVHLIRASEAKVVYRVSPDFQSHLPPSDRPTSPL HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEEECCCHHHCCCCCCCCCCCC PPLRALAQLHRIYILAEHPQGLWLVEQHLAHERVRYEYIRQHWQLVAPETPITLQGLSPQ CHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEECCCHH ALERLEQLGLEPEPFGPNTHLIRRIPLALGSEDPEEVQGSLLELSGCQDLQAAQVTVACR HHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH GALRNGIPLTLEQMQKLLEAWQRTANPHTCPHGRPVYLALAERDLARYFRRRWGLCDRPI HHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCC SDSKLGSLGELDPLGDRFAAQVRRSSGSSASEPTDEASSAPL CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SKIQPLNPERIAQMAAGEVIDSLGAALRELLENALDAQATRIQVEIWPSRWQVRVADNG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCEEEEECCCC QGIPASELEQVARRHTTSKLDGCSLGFRGEALHSLARLGSLAIQTRHVSDAHGWLAAYDR CCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCHHEEECC QGELIHKQPAATALGTVVTVADLFADWPLRRRALPQTRPLLTLVQNAALAHPWVSWQVHQ CCCEECCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHCCCCCEEEECC EGQLLLSLWPGKSLQDLLLQVLPQVDPTDLRYRRIQDGDSDWEVVLGLPDRLHRPHPDWI CCCEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCCCCEEEEECCHHHCCCCCCEE RVAVNGRFVQMPDWQRLIQSVFHHALPRHRHPLVVVHLRLPPEQVDWNRHPAKSELYLEN EEEECCEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHCCCCCCCCCHHHHHHH LTARQEQLRQHLHSLLQLGSGQASRRSVHLIRASEAKVVYRVSPDFQSHLPPSDRPTSPL HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEEECCCHHHCCCCCCCCCCCC PPLRALAQLHRIYILAEHPQGLWLVEQHLAHERVRYEYIRQHWQLVAPETPITLQGLSPQ CHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEECCCHH ALERLEQLGLEPEPFGPNTHLIRRIPLALGSEDPEEVQGSLLELSGCQDLQAAQVTVACR HHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH GALRNGIPLTLEQMQKLLEAWQRTANPHTCPHGRPVYLALAERDLARYFRRRWGLCDRPI HHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCC SDSKLGSLGELDPLGDRFAAQVRRSSGSSASEPTDEASSAPL CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA