| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609681
Identifier: 86609681
GI number: 86609681
Start: 2345085
End: 2345573
Strand: Reverse
Name: 86609681
Synonym: CYB_2238
Alternate gene names: NA
Gene position: 2345573-2345085 (Counterclockwise)
Preceding gene: 86609682
Following gene: 86609680
Centisome position: 76.99
GC content: 56.65
Gene sequence:
>489_bases ATGTTAAGGCCAATTCGTCTATCCGATCTGCGGCAGATGCCGGATCAAACCCAAGAATTGCAGTTTAGGCAGTTTTTTTC GGGCTTTGAGAGTTTGACCCCTGTGGAGGGATCCCTGGAAGTCAGCCATCGGGGCCATTTTCTCGAAGTGAGTGCTGAAG CTCGTACCATTGTCACCCTCACCTGCCACCGCTGCCTCCAGCAGTTCAACCACCGGCTGCACCTGGAAGTTGAGGAGATC ATTTTGATTCGGGATCCCGAACCTCTCCCCTTGGAGCTGGAACTGCAAGACGAAGAAGATCTGCTGGAAAGCCTGCCCCC CAATGGTGAGCTGGATGTCGAAGACTGGATGTACCAGCACCTGCATTTGGAGATGCCCCGCCAGTTGCCCTGCCGTCCCG ACTGTCCGGGCATTGCGGTGGAAGCTACAGCACCAACGGCGGATCCCCGCTGGGCAGCCCTAGCTTCTCTCCTGGAAGAC TCTCCCTAG
Upstream 100 bases:
>100_bases CCCCATCTTGAGAGTGGGCAGAGGGCTGGGAACAAGTTGGCCCTCTTGCTACGGTGACGACAGGGATCCCGGCTATCCAA AACGTGCGAAAGGGGGCGCA
Downstream 100 bases:
>100_bases CTTTTTTGATGTTGCGCCCACAAGTTCTCTGGCGTTTTGCTCGACCCCACACCGTCTACGGCACCAGCGCCAGCGTGGTG GGCCTCTACCTGTTGGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MLRPIRLSDLRQMPDQTQELQFRQFFSGFESLTPVEGSLEVSHRGHFLEVSAEARTIVTLTCHRCLQQFNHRLHLEVEEI ILIRDPEPLPLELELQDEEDLLESLPPNGELDVEDWMYQHLHLEMPRQLPCRPDCPGIAVEATAPTADPRWAALASLLED SP
Sequences:
>Translated_162_residues MLRPIRLSDLRQMPDQTQELQFRQFFSGFESLTPVEGSLEVSHRGHFLEVSAEARTIVTLTCHRCLQQFNHRLHLEVEEI ILIRDPEPLPLELELQDEEDLLESLPPNGELDVEDWMYQHLHLEMPRQLPCRPDCPGIAVEATAPTADPRWAALASLLED SP >Mature_162_residues MLRPIRLSDLRQMPDQTQELQFRQFFSGFESLTPVEGSLEVSHRGHFLEVSAEARTIVTLTCHRCLQQFNHRLHLEVEEI ILIRDPEPLPLELELQDEEDLLESLPPNGELDVEDWMYQHLHLEMPRQLPCRPDCPGIAVEATAPTADPRWAALASLLED SP
Specific function: Unknown
COG id: COG1399
COG function: function code R; Predicted metal-binding, possibly nucleic acid-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18639; Mature: 18639
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRPIRLSDLRQMPDQTQELQFRQFFSGFESLTPVEGSLEVSHRGHFLEVSAEARTIVTL CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEECCCEEEEHH TCHRCLQQFNHRLHLEVEEIILIRDPEPLPLELELQDEEDLLESLPPNGELDVEDWMYQH HHHHHHHHHCCEEEEEEEEEEEEECCCCCCEEEEECCHHHHHHHCCCCCCCCHHHHHHHH LHLEMPRQLPCRPDCPGIAVEATAPTADPRWAALASLLEDSP HHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MLRPIRLSDLRQMPDQTQELQFRQFFSGFESLTPVEGSLEVSHRGHFLEVSAEARTIVTL CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEECCCEEEEHH TCHRCLQQFNHRLHLEVEEIILIRDPEPLPLELELQDEEDLLESLPPNGELDVEDWMYQH HHHHHHHHHCCEEEEEEEEEEEEECCCCCCEEEEECCHHHHHHHCCCCCCCCHHHHHHHH LHLEMPRQLPCRPDCPGIAVEATAPTADPRWAALASLLEDSP HHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA