Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609675

Identifier: 86609675

GI number: 86609675

Start: 2336731

End: 2338602

Strand: Direct

Name: 86609675

Synonym: CYB_2231

Alternate gene names: NA

Gene position: 2336731-2338602 (Clockwise)

Preceding gene: 86609673

Following gene: 86609676

Centisome position: 76.7

GC content: 60.68

Gene sequence:

>1872_bases
ATGAAACTTCAGGTTAACCTTCCGGGGTGGAGCAGGGTAGCCTTGGGAGCAGGGATCCTGGGCGCCGGAGCGGCTCTGGC
CCAGCCCTTGCCGGAAACCCGCATCCCCTGTGAGATCTTCATTGCCGGGGGTGGGCTGGGGGGGGTGGCGGCGGCCTATG
ACGCGCTGCAACTGGGCCGGCAGGTGTGCATGACGGAGATCACCGATTGGATCGGGGGGCAGGTGAGCGCCCAGGGAGTC
TCCGCTTTGGACGAGCGACCCCTGCAACGAGAAAATGACATCTTCCCCAAAGGCTACAGCGAGTTTCGCCGGCGGGTACG
GGAAAAATACGGCGGGGATCCCAATCCGGGCAAATGCTGGGTGAGCGTGCTCTGCTTTTCCCCGCAGGTGGGCCACCAGG
TGATTCGGGAGATGTTGGATCCCTATCTGCAGTCGGGGCAGTTGCGGCTATTTACGGAGACGGTGGTCAAAGACTTGGAG
ATTGCGGATTACCAAATCCGCAGCGTGCAGGCCATCCGCAACATCCCCAAACACGCCAGCGTCCAGCCAGAGAATCGAGG
GGATCTCTCCAGCTACTTTCTCGATTTTTATCGTCTAGAACCCACCGAGGACTGGGACAAGGAGATCCTGCGCTTTGAGC
CGCCGCCAGAACGCCAAGACAAAACCCTGCCCTGGGTGGTGATCGACGCTACTGAAACCGGCGAGCTGCTGCCCTTGGCG
CGGGTGCCCTACCGCCTGGGAACTGATGGCCAAAGCCGCTGGGAACCCAGCTCCAAGCCCTACGTGGATCCCTACTGTAC
CCAGGGCTTCACCTACACCTTTGTCCTGGAGCGCTCTGCTGTGCCGCAGGTGCCGGTCAAGCCGGAGTTCTACAACGATC
CCCTGCACGGCCCCTACTACAGTTACGAACACCCTCGCTTCAACTTTGCGCTGATCTTCACCTACCGCCGCATCCGGGGG
CAGGTGTTCGGCTTTGGGGAAGAGGCCATTCGGGTGGGGGATCAGTCAATGCAGAACTGGACCTGGGGCAATGACTGGCG
CATCACAGGGCCGGATAAGAATTTCATCCTCACCCACGAGCAGTTGCAGGCTTCAGGCCAGTTGGATCCCGGCGACTGGA
TGGGGGGCCTGCGGGTGGAAGCCCTGCGGCGAGCTGAGCAGCATGCTAAGGGCTTTTTCTACTGGCTGGTGGCGGGAAGG
ACGGATTTTCTCCTGCAGCAGGAGGATCCCAACTTTCAAAAAGACTTCTACTTGCGCTATGCCTACCTACGGGGGCCCAA
TACCCCCATGGGAACTGCCAGCGGCCTCTCCAAGTACCCTTATATCCGCGAGTCGCGGCGCATCATTGGTCGGCCCAGCC
TCTCCTACCCAGAAGGATTTACCATCTACGAGTCGGATATCACCACGCGGGAATCGGAGTTGAATCGTGGTCGCCCCTTT
ATCTTCTACGACTCAGTGGGGGTGGGCCAGTACCCCATCGACTTTCACGACTGCCTGCTGCCGGATTTTTCGCTGCCTCC
CAGCAACAACAAAGACGCGCAGGCCCCCAGCTACCCTTACCAGATCCCCCTGCGGGCTCTGATCCCCCAGCGCATCGACA
ACCTTTTGGCCGGCAACAAAAACATCGCCACCAGCCGCATTGCCAGTGCCTCCTACCGGGTGCATCCGGTGGAATGGGCC
ATTGGCACCGCCGCCGGCCACACGGCCCACTTTGCCCTAGAACGGGATCTGATCCCGGCGGAGATCGTGGAGGAGCCGCT
TTTGGATTTGCGGCTGTTGCCAGCTCTCCAGGCCCAAATCCAGAGCTTGGGCAACCCCATTCAATTTCCTGGCACCACCA
TTACCGCCACCGATTGGGCCCAATCCCGCTAG

Upstream 100 bases:

>100_bases
GGAATCCGGCATGAGCATCCGCAAGGCTTTCTCCCATGATAGAGGTTGCCGGAAAGTCCAAAAGGCCAAGCCAGAGCGTG
GGTGGGGAGAGGCTCATTCG

Downstream 100 bases:

>100_bases
CCTAGAAAGGCAGGGTTGGGAGTTGACCGGTGGATCCCGTTGGGGTTGGACTTGTGGGCTGGGAGATGCTTCGCCCCTCT
TTATGGGCCGCCACGGCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 623; Mature: 623

Protein sequence:

>623_residues
MKLQVNLPGWSRVALGAGILGAGAALAQPLPETRIPCEIFIAGGGLGGVAAAYDALQLGRQVCMTEITDWIGGQVSAQGV
SALDERPLQRENDIFPKGYSEFRRRVREKYGGDPNPGKCWVSVLCFSPQVGHQVIREMLDPYLQSGQLRLFTETVVKDLE
IADYQIRSVQAIRNIPKHASVQPENRGDLSSYFLDFYRLEPTEDWDKEILRFEPPPERQDKTLPWVVIDATETGELLPLA
RVPYRLGTDGQSRWEPSSKPYVDPYCTQGFTYTFVLERSAVPQVPVKPEFYNDPLHGPYYSYEHPRFNFALIFTYRRIRG
QVFGFGEEAIRVGDQSMQNWTWGNDWRITGPDKNFILTHEQLQASGQLDPGDWMGGLRVEALRRAEQHAKGFFYWLVAGR
TDFLLQQEDPNFQKDFYLRYAYLRGPNTPMGTASGLSKYPYIRESRRIIGRPSLSYPEGFTIYESDITTRESELNRGRPF
IFYDSVGVGQYPIDFHDCLLPDFSLPPSNNKDAQAPSYPYQIPLRALIPQRIDNLLAGNKNIATSRIASASYRVHPVEWA
IGTAAGHTAHFALERDLIPAEIVEEPLLDLRLLPALQAQIQSLGNPIQFPGTTITATDWAQSR

Sequences:

>Translated_623_residues
MKLQVNLPGWSRVALGAGILGAGAALAQPLPETRIPCEIFIAGGGLGGVAAAYDALQLGRQVCMTEITDWIGGQVSAQGV
SALDERPLQRENDIFPKGYSEFRRRVREKYGGDPNPGKCWVSVLCFSPQVGHQVIREMLDPYLQSGQLRLFTETVVKDLE
IADYQIRSVQAIRNIPKHASVQPENRGDLSSYFLDFYRLEPTEDWDKEILRFEPPPERQDKTLPWVVIDATETGELLPLA
RVPYRLGTDGQSRWEPSSKPYVDPYCTQGFTYTFVLERSAVPQVPVKPEFYNDPLHGPYYSYEHPRFNFALIFTYRRIRG
QVFGFGEEAIRVGDQSMQNWTWGNDWRITGPDKNFILTHEQLQASGQLDPGDWMGGLRVEALRRAEQHAKGFFYWLVAGR
TDFLLQQEDPNFQKDFYLRYAYLRGPNTPMGTASGLSKYPYIRESRRIIGRPSLSYPEGFTIYESDITTRESELNRGRPF
IFYDSVGVGQYPIDFHDCLLPDFSLPPSNNKDAQAPSYPYQIPLRALIPQRIDNLLAGNKNIATSRIASASYRVHPVEWA
IGTAAGHTAHFALERDLIPAEIVEEPLLDLRLLPALQAQIQSLGNPIQFPGTTITATDWAQSR
>Mature_623_residues
MKLQVNLPGWSRVALGAGILGAGAALAQPLPETRIPCEIFIAGGGLGGVAAAYDALQLGRQVCMTEITDWIGGQVSAQGV
SALDERPLQRENDIFPKGYSEFRRRVREKYGGDPNPGKCWVSVLCFSPQVGHQVIREMLDPYLQSGQLRLFTETVVKDLE
IADYQIRSVQAIRNIPKHASVQPENRGDLSSYFLDFYRLEPTEDWDKEILRFEPPPERQDKTLPWVVIDATETGELLPLA
RVPYRLGTDGQSRWEPSSKPYVDPYCTQGFTYTFVLERSAVPQVPVKPEFYNDPLHGPYYSYEHPRFNFALIFTYRRIRG
QVFGFGEEAIRVGDQSMQNWTWGNDWRITGPDKNFILTHEQLQASGQLDPGDWMGGLRVEALRRAEQHAKGFFYWLVAGR
TDFLLQQEDPNFQKDFYLRYAYLRGPNTPMGTASGLSKYPYIRESRRIIGRPSLSYPEGFTIYESDITTRESELNRGRPF
IFYDSVGVGQYPIDFHDCLLPDFSLPPSNNKDAQAPSYPYQIPLRALIPQRIDNLLAGNKNIATSRIASASYRVHPVEWA
IGTAAGHTAHFALERDLIPAEIVEEPLLDLRLLPALQAQIQSLGNPIQFPGTTITATDWAQSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70429; Mature: 70429

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLQVNLPGWSRVALGAGILGAGAALAQPLPETRIPCEIFIAGGGLGGVAAAYDALQLGR
CEEEEECCCCCHHHHCCCHHHCCHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH
QVCMTEITDWIGGQVSAQGVSALDERPLQRENDIFPKGYSEFRRRVREKYGGDPNPGKCW
HHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEE
VSVLCFSPQVGHQVIREMLDPYLQSGQLRLFTETVVKDLEIADYQIRSVQAIRNIPKHAS
EEEEECCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VQPENRGDLSSYFLDFYRLEPTEDWDKEILRFEPPPERQDKTLPWVVIDATETGELLPLA
CCCCCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCHH
RVPYRLGTDGQSRWEPSSKPYVDPYCTQGFTYTFVLERSAVPQVPVKPEFYNDPLHGPYY
HCCEEECCCCCCCCCCCCCCCCCCHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
SYEHPRFNFALIFTYRRIRGQVFGFGEEAIRVGDQSMQNWTWGNDWRITGPDKNFILTHE
CCCCCCEEEEEEEEEHHHCCCEECCCHHHHHHCCHHHCCCCCCCCCEEECCCCCEEEEHH
QLQASGQLDPGDWMGGLRVEALRRAEQHAKGFFYWLVAGRTDFLLQQEDPNFQKDFYLRY
HHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCEEEEECCCCCCCCCEEEEE
AYLRGPNTPMGTASGLSKYPYIRESRRIIGRPSLSYPEGFTIYESDITTRESELNRGRPF
EEEECCCCCCCCCCCCCCCCCHHHCCHHHCCCCCCCCCCCEEEECCCCCCHHHHCCCCCE
IFYDSVGVGQYPIDFHDCLLPDFSLPPSNNKDAQAPSYPYQIPLRALIPQRIDNLLAGNK
EEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
NIATSRIASASYRVHPVEWAIGTAAGHTAHFALERDLIPAEIVEEPLLDLRLLPALQAQI
CCHHHHHHCCCEEEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
QSLGNPIQFPGTTITATDWAQSR
HHCCCCEECCCCEEEECCCCCCC
>Mature Secondary Structure
MKLQVNLPGWSRVALGAGILGAGAALAQPLPETRIPCEIFIAGGGLGGVAAAYDALQLGR
CEEEEECCCCCHHHHCCCHHHCCHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH
QVCMTEITDWIGGQVSAQGVSALDERPLQRENDIFPKGYSEFRRRVREKYGGDPNPGKCW
HHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEE
VSVLCFSPQVGHQVIREMLDPYLQSGQLRLFTETVVKDLEIADYQIRSVQAIRNIPKHAS
EEEEECCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VQPENRGDLSSYFLDFYRLEPTEDWDKEILRFEPPPERQDKTLPWVVIDATETGELLPLA
CCCCCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCHH
RVPYRLGTDGQSRWEPSSKPYVDPYCTQGFTYTFVLERSAVPQVPVKPEFYNDPLHGPYY
HCCEEECCCCCCCCCCCCCCCCCCHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
SYEHPRFNFALIFTYRRIRGQVFGFGEEAIRVGDQSMQNWTWGNDWRITGPDKNFILTHE
CCCCCCEEEEEEEEEHHHCCCEECCCHHHHHHCCHHHCCCCCCCCCEEECCCCCEEEEHH
QLQASGQLDPGDWMGGLRVEALRRAEQHAKGFFYWLVAGRTDFLLQQEDPNFQKDFYLRY
HHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCEEEEECCCCCCCCCEEEEE
AYLRGPNTPMGTASGLSKYPYIRESRRIIGRPSLSYPEGFTIYESDITTRESELNRGRPF
EEEECCCCCCCCCCCCCCCCCHHHCCHHHCCCCCCCCCCCEEEECCCCCCHHHHCCCCCE
IFYDSVGVGQYPIDFHDCLLPDFSLPPSNNKDAQAPSYPYQIPLRALIPQRIDNLLAGNK
EEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
NIATSRIASASYRVHPVEWAIGTAAGHTAHFALERDLIPAEIVEEPLLDLRLLPALQAQI
CCHHHHHHCCCEEEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
QSLGNPIQFPGTTITATDWAQSR
HHCCCCEECCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA