| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609675
Identifier: 86609675
GI number: 86609675
Start: 2336731
End: 2338602
Strand: Direct
Name: 86609675
Synonym: CYB_2231
Alternate gene names: NA
Gene position: 2336731-2338602 (Clockwise)
Preceding gene: 86609673
Following gene: 86609676
Centisome position: 76.7
GC content: 60.68
Gene sequence:
>1872_bases ATGAAACTTCAGGTTAACCTTCCGGGGTGGAGCAGGGTAGCCTTGGGAGCAGGGATCCTGGGCGCCGGAGCGGCTCTGGC CCAGCCCTTGCCGGAAACCCGCATCCCCTGTGAGATCTTCATTGCCGGGGGTGGGCTGGGGGGGGTGGCGGCGGCCTATG ACGCGCTGCAACTGGGCCGGCAGGTGTGCATGACGGAGATCACCGATTGGATCGGGGGGCAGGTGAGCGCCCAGGGAGTC TCCGCTTTGGACGAGCGACCCCTGCAACGAGAAAATGACATCTTCCCCAAAGGCTACAGCGAGTTTCGCCGGCGGGTACG GGAAAAATACGGCGGGGATCCCAATCCGGGCAAATGCTGGGTGAGCGTGCTCTGCTTTTCCCCGCAGGTGGGCCACCAGG TGATTCGGGAGATGTTGGATCCCTATCTGCAGTCGGGGCAGTTGCGGCTATTTACGGAGACGGTGGTCAAAGACTTGGAG ATTGCGGATTACCAAATCCGCAGCGTGCAGGCCATCCGCAACATCCCCAAACACGCCAGCGTCCAGCCAGAGAATCGAGG GGATCTCTCCAGCTACTTTCTCGATTTTTATCGTCTAGAACCCACCGAGGACTGGGACAAGGAGATCCTGCGCTTTGAGC CGCCGCCAGAACGCCAAGACAAAACCCTGCCCTGGGTGGTGATCGACGCTACTGAAACCGGCGAGCTGCTGCCCTTGGCG CGGGTGCCCTACCGCCTGGGAACTGATGGCCAAAGCCGCTGGGAACCCAGCTCCAAGCCCTACGTGGATCCCTACTGTAC CCAGGGCTTCACCTACACCTTTGTCCTGGAGCGCTCTGCTGTGCCGCAGGTGCCGGTCAAGCCGGAGTTCTACAACGATC CCCTGCACGGCCCCTACTACAGTTACGAACACCCTCGCTTCAACTTTGCGCTGATCTTCACCTACCGCCGCATCCGGGGG CAGGTGTTCGGCTTTGGGGAAGAGGCCATTCGGGTGGGGGATCAGTCAATGCAGAACTGGACCTGGGGCAATGACTGGCG CATCACAGGGCCGGATAAGAATTTCATCCTCACCCACGAGCAGTTGCAGGCTTCAGGCCAGTTGGATCCCGGCGACTGGA TGGGGGGCCTGCGGGTGGAAGCCCTGCGGCGAGCTGAGCAGCATGCTAAGGGCTTTTTCTACTGGCTGGTGGCGGGAAGG ACGGATTTTCTCCTGCAGCAGGAGGATCCCAACTTTCAAAAAGACTTCTACTTGCGCTATGCCTACCTACGGGGGCCCAA TACCCCCATGGGAACTGCCAGCGGCCTCTCCAAGTACCCTTATATCCGCGAGTCGCGGCGCATCATTGGTCGGCCCAGCC TCTCCTACCCAGAAGGATTTACCATCTACGAGTCGGATATCACCACGCGGGAATCGGAGTTGAATCGTGGTCGCCCCTTT ATCTTCTACGACTCAGTGGGGGTGGGCCAGTACCCCATCGACTTTCACGACTGCCTGCTGCCGGATTTTTCGCTGCCTCC CAGCAACAACAAAGACGCGCAGGCCCCCAGCTACCCTTACCAGATCCCCCTGCGGGCTCTGATCCCCCAGCGCATCGACA ACCTTTTGGCCGGCAACAAAAACATCGCCACCAGCCGCATTGCCAGTGCCTCCTACCGGGTGCATCCGGTGGAATGGGCC ATTGGCACCGCCGCCGGCCACACGGCCCACTTTGCCCTAGAACGGGATCTGATCCCGGCGGAGATCGTGGAGGAGCCGCT TTTGGATTTGCGGCTGTTGCCAGCTCTCCAGGCCCAAATCCAGAGCTTGGGCAACCCCATTCAATTTCCTGGCACCACCA TTACCGCCACCGATTGGGCCCAATCCCGCTAG
Upstream 100 bases:
>100_bases GGAATCCGGCATGAGCATCCGCAAGGCTTTCTCCCATGATAGAGGTTGCCGGAAAGTCCAAAAGGCCAAGCCAGAGCGTG GGTGGGGAGAGGCTCATTCG
Downstream 100 bases:
>100_bases CCTAGAAAGGCAGGGTTGGGAGTTGACCGGTGGATCCCGTTGGGGTTGGACTTGTGGGCTGGGAGATGCTTCGCCCCTCT TTATGGGCCGCCACGGCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 623; Mature: 623
Protein sequence:
>623_residues MKLQVNLPGWSRVALGAGILGAGAALAQPLPETRIPCEIFIAGGGLGGVAAAYDALQLGRQVCMTEITDWIGGQVSAQGV SALDERPLQRENDIFPKGYSEFRRRVREKYGGDPNPGKCWVSVLCFSPQVGHQVIREMLDPYLQSGQLRLFTETVVKDLE IADYQIRSVQAIRNIPKHASVQPENRGDLSSYFLDFYRLEPTEDWDKEILRFEPPPERQDKTLPWVVIDATETGELLPLA RVPYRLGTDGQSRWEPSSKPYVDPYCTQGFTYTFVLERSAVPQVPVKPEFYNDPLHGPYYSYEHPRFNFALIFTYRRIRG QVFGFGEEAIRVGDQSMQNWTWGNDWRITGPDKNFILTHEQLQASGQLDPGDWMGGLRVEALRRAEQHAKGFFYWLVAGR TDFLLQQEDPNFQKDFYLRYAYLRGPNTPMGTASGLSKYPYIRESRRIIGRPSLSYPEGFTIYESDITTRESELNRGRPF IFYDSVGVGQYPIDFHDCLLPDFSLPPSNNKDAQAPSYPYQIPLRALIPQRIDNLLAGNKNIATSRIASASYRVHPVEWA IGTAAGHTAHFALERDLIPAEIVEEPLLDLRLLPALQAQIQSLGNPIQFPGTTITATDWAQSR
Sequences:
>Translated_623_residues MKLQVNLPGWSRVALGAGILGAGAALAQPLPETRIPCEIFIAGGGLGGVAAAYDALQLGRQVCMTEITDWIGGQVSAQGV SALDERPLQRENDIFPKGYSEFRRRVREKYGGDPNPGKCWVSVLCFSPQVGHQVIREMLDPYLQSGQLRLFTETVVKDLE IADYQIRSVQAIRNIPKHASVQPENRGDLSSYFLDFYRLEPTEDWDKEILRFEPPPERQDKTLPWVVIDATETGELLPLA RVPYRLGTDGQSRWEPSSKPYVDPYCTQGFTYTFVLERSAVPQVPVKPEFYNDPLHGPYYSYEHPRFNFALIFTYRRIRG QVFGFGEEAIRVGDQSMQNWTWGNDWRITGPDKNFILTHEQLQASGQLDPGDWMGGLRVEALRRAEQHAKGFFYWLVAGR TDFLLQQEDPNFQKDFYLRYAYLRGPNTPMGTASGLSKYPYIRESRRIIGRPSLSYPEGFTIYESDITTRESELNRGRPF IFYDSVGVGQYPIDFHDCLLPDFSLPPSNNKDAQAPSYPYQIPLRALIPQRIDNLLAGNKNIATSRIASASYRVHPVEWA IGTAAGHTAHFALERDLIPAEIVEEPLLDLRLLPALQAQIQSLGNPIQFPGTTITATDWAQSR >Mature_623_residues MKLQVNLPGWSRVALGAGILGAGAALAQPLPETRIPCEIFIAGGGLGGVAAAYDALQLGRQVCMTEITDWIGGQVSAQGV SALDERPLQRENDIFPKGYSEFRRRVREKYGGDPNPGKCWVSVLCFSPQVGHQVIREMLDPYLQSGQLRLFTETVVKDLE IADYQIRSVQAIRNIPKHASVQPENRGDLSSYFLDFYRLEPTEDWDKEILRFEPPPERQDKTLPWVVIDATETGELLPLA RVPYRLGTDGQSRWEPSSKPYVDPYCTQGFTYTFVLERSAVPQVPVKPEFYNDPLHGPYYSYEHPRFNFALIFTYRRIRG QVFGFGEEAIRVGDQSMQNWTWGNDWRITGPDKNFILTHEQLQASGQLDPGDWMGGLRVEALRRAEQHAKGFFYWLVAGR TDFLLQQEDPNFQKDFYLRYAYLRGPNTPMGTASGLSKYPYIRESRRIIGRPSLSYPEGFTIYESDITTRESELNRGRPF IFYDSVGVGQYPIDFHDCLLPDFSLPPSNNKDAQAPSYPYQIPLRALIPQRIDNLLAGNKNIATSRIASASYRVHPVEWA IGTAAGHTAHFALERDLIPAEIVEEPLLDLRLLPALQAQIQSLGNPIQFPGTTITATDWAQSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70429; Mature: 70429
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLQVNLPGWSRVALGAGILGAGAALAQPLPETRIPCEIFIAGGGLGGVAAAYDALQLGR CEEEEECCCCCHHHHCCCHHHCCHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH QVCMTEITDWIGGQVSAQGVSALDERPLQRENDIFPKGYSEFRRRVREKYGGDPNPGKCW HHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEE VSVLCFSPQVGHQVIREMLDPYLQSGQLRLFTETVVKDLEIADYQIRSVQAIRNIPKHAS EEEEECCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VQPENRGDLSSYFLDFYRLEPTEDWDKEILRFEPPPERQDKTLPWVVIDATETGELLPLA CCCCCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCHH RVPYRLGTDGQSRWEPSSKPYVDPYCTQGFTYTFVLERSAVPQVPVKPEFYNDPLHGPYY HCCEEECCCCCCCCCCCCCCCCCCHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCC SYEHPRFNFALIFTYRRIRGQVFGFGEEAIRVGDQSMQNWTWGNDWRITGPDKNFILTHE CCCCCCEEEEEEEEEHHHCCCEECCCHHHHHHCCHHHCCCCCCCCCEEECCCCCEEEEHH QLQASGQLDPGDWMGGLRVEALRRAEQHAKGFFYWLVAGRTDFLLQQEDPNFQKDFYLRY HHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCEEEEECCCCCCCCCEEEEE AYLRGPNTPMGTASGLSKYPYIRESRRIIGRPSLSYPEGFTIYESDITTRESELNRGRPF EEEECCCCCCCCCCCCCCCCCHHHCCHHHCCCCCCCCCCCEEEECCCCCCHHHHCCCCCE IFYDSVGVGQYPIDFHDCLLPDFSLPPSNNKDAQAPSYPYQIPLRALIPQRIDNLLAGNK EEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC NIATSRIASASYRVHPVEWAIGTAAGHTAHFALERDLIPAEIVEEPLLDLRLLPALQAQI CCHHHHHHCCCEEEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH QSLGNPIQFPGTTITATDWAQSR HHCCCCEECCCCEEEECCCCCCC >Mature Secondary Structure MKLQVNLPGWSRVALGAGILGAGAALAQPLPETRIPCEIFIAGGGLGGVAAAYDALQLGR CEEEEECCCCCHHHHCCCHHHCCHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH QVCMTEITDWIGGQVSAQGVSALDERPLQRENDIFPKGYSEFRRRVREKYGGDPNPGKCW HHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEE VSVLCFSPQVGHQVIREMLDPYLQSGQLRLFTETVVKDLEIADYQIRSVQAIRNIPKHAS EEEEECCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VQPENRGDLSSYFLDFYRLEPTEDWDKEILRFEPPPERQDKTLPWVVIDATETGELLPLA CCCCCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCHH RVPYRLGTDGQSRWEPSSKPYVDPYCTQGFTYTFVLERSAVPQVPVKPEFYNDPLHGPYY HCCEEECCCCCCCCCCCCCCCCCCHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCC SYEHPRFNFALIFTYRRIRGQVFGFGEEAIRVGDQSMQNWTWGNDWRITGPDKNFILTHE CCCCCCEEEEEEEEEHHHCCCEECCCHHHHHHCCHHHCCCCCCCCCEEECCCCCEEEEHH QLQASGQLDPGDWMGGLRVEALRRAEQHAKGFFYWLVAGRTDFLLQQEDPNFQKDFYLRY HHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCEEEEECCCCCCCCCEEEEE AYLRGPNTPMGTASGLSKYPYIRESRRIIGRPSLSYPEGFTIYESDITTRESELNRGRPF EEEECCCCCCCCCCCCCCCCCHHHCCHHHCCCCCCCCCCCEEEECCCCCCHHHHCCCCCE IFYDSVGVGQYPIDFHDCLLPDFSLPPSNNKDAQAPSYPYQIPLRALIPQRIDNLLAGNK EEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC NIATSRIASASYRVHPVEWAIGTAAGHTAHFALERDLIPAEIVEEPLLDLRLLPALQAQI CCHHHHHHCCCEEEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH QSLGNPIQFPGTTITATDWAQSR HHCCCCEECCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA