Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609656

Identifier: 86609656

GI number: 86609656

Start: 2318973

End: 2319650

Strand: Direct

Name: 86609656

Synonym: CYB_2210

Alternate gene names: NA

Gene position: 2318973-2319650 (Clockwise)

Preceding gene: 86609654

Following gene: 86609659

Centisome position: 76.11

GC content: 61.36

Gene sequence:

>678_bases
ATGTTGCTAGGGATCCTGCTGATCGTCTATCGCTGGCGGGGCACCCTGCTGATGTTGATCAATCCCGGCTACGTGAATGT
GGCGCTGTTGGCCGGGCTGTGTCTGTTGGGCTTGGGGATTGGCCGTTGGCGAGGAGCCAAAGTTGCCTCTTCTGAAGTCC
ATGCCTCACTATTGGGGCCGCGGCTGGGCGCAGGACTGTTGATCCTGACGGCCCTGCTGGGGTTTTGGGTCGAGCCACGC
CCGCTCTCCAGCCAAACTGCCCTCAACCGAGGGGTATCTCCCTATCTGGGAGCATCTCGTAGCCAGCCGCAGGCTTTTCG
CCCCAAGCTCGACCCGCGTCAGCGTACTCTGCTGGACTGGGTGCGCACCTTGGATGTTTACCCGGATCCCTACACCTATG
AAGACCAGCCGGTGCGGGTGCAGGGGTTCGTCATTCCCGACAAGCAACCCGACCACTTTGTTATTGCCCGGTTTTTGGTT
AGCTGCTGTGCTGCCGATGCTTACCCCGTGGGCTTGCCGGTGCGCTGGCCAGAGGCAGAGCAGTTAACTGCCGACAGTTG
GCTGCGTCTGGAGGGGCGCATGGCCGTGGAGCAGCGGGATGGCCAATCTCAGTTGGTAATCGCTGCCGAGCAGGTGGAGC
CGATACCGGTGCCGCCAAACCCCTATGCCGACGAATAA

Upstream 100 bases:

>100_bases
GAAAACCAAGGGTATGTCTCGGCCTGTCGGTCGCGTCAGCGGGACGGAGTCCAAACCGTTGCGGTGGGGCAATACGGCCT
ACCGGGAGGCGGTTGGGTTG

Downstream 100 bases:

>100_bases
GAGCAGGCGCTTAGATATCGGTTTAGATATCGGTTTCGCTCAGCTTAGCGCTCAGGTAATCGAAGGGCTCGGCCACAAAG
CTATAGTCTTCGCCGGAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MLLGILLIVYRWRGTLLMLINPGYVNVALLAGLCLLGLGIGRWRGAKVASSEVHASLLGPRLGAGLLILTALLGFWVEPR
PLSSQTALNRGVSPYLGASRSQPQAFRPKLDPRQRTLLDWVRTLDVYPDPYTYEDQPVRVQGFVIPDKQPDHFVIARFLV
SCCAADAYPVGLPVRWPEAEQLTADSWLRLEGRMAVEQRDGQSQLVIAAEQVEPIPVPPNPYADE

Sequences:

>Translated_225_residues
MLLGILLIVYRWRGTLLMLINPGYVNVALLAGLCLLGLGIGRWRGAKVASSEVHASLLGPRLGAGLLILTALLGFWVEPR
PLSSQTALNRGVSPYLGASRSQPQAFRPKLDPRQRTLLDWVRTLDVYPDPYTYEDQPVRVQGFVIPDKQPDHFVIARFLV
SCCAADAYPVGLPVRWPEAEQLTADSWLRLEGRMAVEQRDGQSQLVIAAEQVEPIPVPPNPYADE
>Mature_225_residues
MLLGILLIVYRWRGTLLMLINPGYVNVALLAGLCLLGLGIGRWRGAKVASSEVHASLLGPRLGAGLLILTALLGFWVEPR
PLSSQTALNRGVSPYLGASRSQPQAFRPKLDPRQRTLLDWVRTLDVYPDPYTYEDQPVRVQGFVIPDKQPDHFVIARFLV
SCCAADAYPVGLPVRWPEAEQLTADSWLRLEGRMAVEQRDGQSQLVIAAEQVEPIPVPPNPYADE

Specific function: Unknown

COG id: COG3689

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24903; Mature: 24903

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLGILLIVYRWRGTLLMLINPGYVNVALLAGLCLLGLGIGRWRGAKVASSEVHASLLGP
CHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCC
RLGAGLLILTALLGFWVEPRPLSSQTALNRGVSPYLGASRSQPQAFRPKLDPRQRTLLDW
HHCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
VRTLDVYPDPYTYEDQPVRVQGFVIPDKQPDHFVIARFLVSCCAADAYPVGLPVRWPEAE
HHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
QLTADSWLRLEGRMAVEQRDGQSQLVIAAEQVEPIPVPPNPYADE
HCCCCCEEEECCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLLGILLIVYRWRGTLLMLINPGYVNVALLAGLCLLGLGIGRWRGAKVASSEVHASLLGP
CHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCC
RLGAGLLILTALLGFWVEPRPLSSQTALNRGVSPYLGASRSQPQAFRPKLDPRQRTLLDW
HHCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
VRTLDVYPDPYTYEDQPVRVQGFVIPDKQPDHFVIARFLVSCCAADAYPVGLPVRWPEAE
HHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
QLTADSWLRLEGRMAVEQRDGQSQLVIAAEQVEPIPVPPNPYADE
HCCCCCEEEECCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA