| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609656
Identifier: 86609656
GI number: 86609656
Start: 2318973
End: 2319650
Strand: Direct
Name: 86609656
Synonym: CYB_2210
Alternate gene names: NA
Gene position: 2318973-2319650 (Clockwise)
Preceding gene: 86609654
Following gene: 86609659
Centisome position: 76.11
GC content: 61.36
Gene sequence:
>678_bases ATGTTGCTAGGGATCCTGCTGATCGTCTATCGCTGGCGGGGCACCCTGCTGATGTTGATCAATCCCGGCTACGTGAATGT GGCGCTGTTGGCCGGGCTGTGTCTGTTGGGCTTGGGGATTGGCCGTTGGCGAGGAGCCAAAGTTGCCTCTTCTGAAGTCC ATGCCTCACTATTGGGGCCGCGGCTGGGCGCAGGACTGTTGATCCTGACGGCCCTGCTGGGGTTTTGGGTCGAGCCACGC CCGCTCTCCAGCCAAACTGCCCTCAACCGAGGGGTATCTCCCTATCTGGGAGCATCTCGTAGCCAGCCGCAGGCTTTTCG CCCCAAGCTCGACCCGCGTCAGCGTACTCTGCTGGACTGGGTGCGCACCTTGGATGTTTACCCGGATCCCTACACCTATG AAGACCAGCCGGTGCGGGTGCAGGGGTTCGTCATTCCCGACAAGCAACCCGACCACTTTGTTATTGCCCGGTTTTTGGTT AGCTGCTGTGCTGCCGATGCTTACCCCGTGGGCTTGCCGGTGCGCTGGCCAGAGGCAGAGCAGTTAACTGCCGACAGTTG GCTGCGTCTGGAGGGGCGCATGGCCGTGGAGCAGCGGGATGGCCAATCTCAGTTGGTAATCGCTGCCGAGCAGGTGGAGC CGATACCGGTGCCGCCAAACCCCTATGCCGACGAATAA
Upstream 100 bases:
>100_bases GAAAACCAAGGGTATGTCTCGGCCTGTCGGTCGCGTCAGCGGGACGGAGTCCAAACCGTTGCGGTGGGGCAATACGGCCT ACCGGGAGGCGGTTGGGTTG
Downstream 100 bases:
>100_bases GAGCAGGCGCTTAGATATCGGTTTAGATATCGGTTTCGCTCAGCTTAGCGCTCAGGTAATCGAAGGGCTCGGCCACAAAG CTATAGTCTTCGCCGGAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MLLGILLIVYRWRGTLLMLINPGYVNVALLAGLCLLGLGIGRWRGAKVASSEVHASLLGPRLGAGLLILTALLGFWVEPR PLSSQTALNRGVSPYLGASRSQPQAFRPKLDPRQRTLLDWVRTLDVYPDPYTYEDQPVRVQGFVIPDKQPDHFVIARFLV SCCAADAYPVGLPVRWPEAEQLTADSWLRLEGRMAVEQRDGQSQLVIAAEQVEPIPVPPNPYADE
Sequences:
>Translated_225_residues MLLGILLIVYRWRGTLLMLINPGYVNVALLAGLCLLGLGIGRWRGAKVASSEVHASLLGPRLGAGLLILTALLGFWVEPR PLSSQTALNRGVSPYLGASRSQPQAFRPKLDPRQRTLLDWVRTLDVYPDPYTYEDQPVRVQGFVIPDKQPDHFVIARFLV SCCAADAYPVGLPVRWPEAEQLTADSWLRLEGRMAVEQRDGQSQLVIAAEQVEPIPVPPNPYADE >Mature_225_residues MLLGILLIVYRWRGTLLMLINPGYVNVALLAGLCLLGLGIGRWRGAKVASSEVHASLLGPRLGAGLLILTALLGFWVEPR PLSSQTALNRGVSPYLGASRSQPQAFRPKLDPRQRTLLDWVRTLDVYPDPYTYEDQPVRVQGFVIPDKQPDHFVIARFLV SCCAADAYPVGLPVRWPEAEQLTADSWLRLEGRMAVEQRDGQSQLVIAAEQVEPIPVPPNPYADE
Specific function: Unknown
COG id: COG3689
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24903; Mature: 24903
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLGILLIVYRWRGTLLMLINPGYVNVALLAGLCLLGLGIGRWRGAKVASSEVHASLLGP CHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCC RLGAGLLILTALLGFWVEPRPLSSQTALNRGVSPYLGASRSQPQAFRPKLDPRQRTLLDW HHCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH VRTLDVYPDPYTYEDQPVRVQGFVIPDKQPDHFVIARFLVSCCAADAYPVGLPVRWPEAE HHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHH QLTADSWLRLEGRMAVEQRDGQSQLVIAAEQVEPIPVPPNPYADE HCCCCCEEEECCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MLLGILLIVYRWRGTLLMLINPGYVNVALLAGLCLLGLGIGRWRGAKVASSEVHASLLGP CHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCC RLGAGLLILTALLGFWVEPRPLSSQTALNRGVSPYLGASRSQPQAFRPKLDPRQRTLLDW HHCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH VRTLDVYPDPYTYEDQPVRVQGFVIPDKQPDHFVIARFLVSCCAADAYPVGLPVRWPEAE HHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHH QLTADSWLRLEGRMAVEQRDGQSQLVIAAEQVEPIPVPPNPYADE HCCCCCEEEECCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA