| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609645
Identifier: 86609645
GI number: 86609645
Start: 2306599
End: 2307036
Strand: Reverse
Name: 86609645
Synonym: CYB_2198
Alternate gene names: NA
Gene position: 2307036-2306599 (Counterclockwise)
Preceding gene: 86609646
Following gene: 86609643
Centisome position: 75.72
GC content: 59.36
Gene sequence:
>438_bases ATGAGTGTGGTGAATCGCCCCGAGGTGGTGGCAGAGCTAACCGAACTCTACCATCAGTACGAAGCTGCCCTGACGAGCAA TGATGTGCCCACCCTAACCCGCCTGTTTTGGGATGGCCCCCAGGTGGTGCGCTTTGGGGTGGGGGAAAATCTCTACGGGG GAGAGGAGATCAAGGCTTTTCGCCAACAGCGCCCTCCCACGAATTTGGCCCGCGAGATGCTGCGTTTGCAGGTGGTCACC TTTGGGGAAGATTGCGGCTCGGTCACCCTAGAGTTTCGCCGTCCGGTGAACGGGATCCCTCGCTTGGGCCGCCAAAGCCA GATGTGGTACAGGTTCCCCGATATCGGCTGGAAGATTGTCTCTGCCCACGTGTCGTTTTTGCCGGAAGATCAGGGGGAAA TGCTGCGCAAAAGCTGGGGATCCACCTCGCCCACGTAG
Upstream 100 bases:
>100_bases GTCTGACAGAGCAAGGTGGGGGATCCCGCTGTTCTTTTAGAACCTCCTGCTGCTCCTGGAGCCGATAGGATCCCATTTCG ATTGCACGAGAGCCCGGCCC
Downstream 100 bases:
>100_bases GTATTCAGCCCAATGGCCGTGGCGATCAAAGCCCCGTCCACCTCCACCCGCCGATACTGGGAGATGGCCTCTGCCAGGGG CACATCCACCACCCGCCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MSVVNRPEVVAELTELYHQYEAALTSNDVPTLTRLFWDGPQVVRFGVGENLYGGEEIKAFRQQRPPTNLAREMLRLQVVT FGEDCGSVTLEFRRPVNGIPRLGRQSQMWYRFPDIGWKIVSAHVSFLPEDQGEMLRKSWGSTSPT
Sequences:
>Translated_145_residues MSVVNRPEVVAELTELYHQYEAALTSNDVPTLTRLFWDGPQVVRFGVGENLYGGEEIKAFRQQRPPTNLAREMLRLQVVT FGEDCGSVTLEFRRPVNGIPRLGRQSQMWYRFPDIGWKIVSAHVSFLPEDQGEMLRKSWGSTSPT >Mature_144_residues SVVNRPEVVAELTELYHQYEAALTSNDVPTLTRLFWDGPQVVRFGVGENLYGGEEIKAFRQQRPPTNLAREMLRLQVVTF GEDCGSVTLEFRRPVNGIPRLGRQSQMWYRFPDIGWKIVSAHVSFLPEDQGEMLRKSWGSTSPT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16571; Mature: 16440
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVVNRPEVVAELTELYHQYEAALTSNDVPTLTRLFWDGPQVVRFGVGENLYGGEEIKAF CCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEECCCCCCCCCHHHHHH RQQRPPTNLAREMLRLQVVTFGEDCGSVTLEFRRPVNGIPRLGRQSQMWYRFPDIGWKIV HHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCHHHH SAHVSFLPEDQGEMLRKSWGSTSPT HHHHHHCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure SVVNRPEVVAELTELYHQYEAALTSNDVPTLTRLFWDGPQVVRFGVGENLYGGEEIKAF CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEECCCCCCCCCHHHHHH RQQRPPTNLAREMLRLQVVTFGEDCGSVTLEFRRPVNGIPRLGRQSQMWYRFPDIGWKIV HHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCHHHH SAHVSFLPEDQGEMLRKSWGSTSPT HHHHHHCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA